Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->AHL20(1)                                  <---------AHL20(2)                                  --------->AHL20(2)                         ----------->GT1                      <---------ICU4                      --------->ATHB51                      <--------ATHB1     ----------->GT1  -------->HAHB4                                        <---------ANAC46    --------->ICU4    --------->YAB1                                        <---------ANAC58 <---------YAB1      <---------ATHB51                                       <---------ANAC58 ----ATHB1           --------->ICU4          ---------->DOF2   <---------ANAC46       <----------DOF2 ---->ATHB12         <---------YAB1        <------ZmHOX2a(2)   <---------ANAC58 <---------ANAC58 --->ICU4          --------->YAB1<---------AHL20(2)            <---------ANAC58 <---------ANAC58 ----YAB1<---------AHL20(2)      --------->AHL20(2)          <---------AHL20(2)<---------TOE1(2)   attgtaattgttaaatttttgtaataattgtgaaaataatttgggatcaaagcttcaaacaatttacttggacttatgtcttgggtttctttctcaatgc  25271400                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                 <------ZmHOX2a(1)                                                                              --------->HSFC1(1)-----                                                                              --------->HSFB2a(2)                                                                              <---------HSFC1(1)<----                                                                              <---------HSFB2a(2)                                                                          ------>ZmHOX2a(2) <-------PIF5                             --------->ANAC46                             ==============HOX2a_HOX2a                             --------->ANAC58                            ===============HOX2a_HOX2a                          <---------ZAT18                                <------ZmHOX2a(2)  ------->MYC2                          --------->ZAT14                               <---------ARR14(3)  <-------MYC2                          <---------ZAT14                               --------->ARR14(3)  ------->PIF4                          --------->ZAT18                               --------->ARR11(3)  ------->MYC4                   ----------->HVH21      --------->LBD16               --------->ARR14(2)  ------->MYC3                  <------NtERF2          <---------LBD16                <---------ARR11(3)  <-------PIF4                <---------ANAC46        <---------LBD16                 <---------ARR14(2)  <-------MYC3             <---------RAP2.6(2)      <---------WRKY18(1)               --------->AGP1      ------->PIF5           --------->ALFIN1  --------->ANAC58                          <---------GLK1(1) <---------AtLEC2           <-----------RAV1(1)       ----------->HVH21                ----------->ARR10 <-------TEIL   aattccatatggattgtggccgagacagtgcacgagaccatgaccgggagaggtatgtcgagttttagagtagagatcttctaggagatgtgcatgtgcc  25271500         --------->YAB1        <---------YAB1    <-------GAMYB -------RAV1(2) ----------->AGL2 ------------AGL1               --------->AHL20(2)                     <----------DOF2 ----------->AGL1             --------->TOE2(3)                     ------->TEIL                  <-- ------------AG--------->RAP2.6(2)                                <-------TEIL             <--------- ---------->AGL15            --------->YAB1 <----------DOF2      --------->ALFIN1  <---------ANAC58 -----------AGL15            <---------ICU4 <-----------TBP   --------->ALFIN1     <---------ANAC58   agatgtggttatcacagtcgcaaacacataaacattatatagagcgttttatagatgttttagagaggtgcatctttttgttttgtcttgtgtctttatt  25271600                     --------->YAB1                    --------->ICU4                  --------->YAB1           <---------ARR14(2)           --------->ARR14(2)            ------>ZmHOX2a(1)           ------->TEIL                 <---------ANAC58           --------->GLK1(2)            <---------ANAC46                   --------->ANAC46  --------          <---------CCA1(2) <---------HSFB2a(2)                   --------->ALFIN1    --------->ANAC58 --------DOF2  ----------->GT1          <---------ANAC58       --------->DAG2  --------->MYB52(1) -DOF2<---------ANAC46      --------->HSFB2a(2)                <---------TOE2(3)      --------->ANAC58   ctttctcttcgtgaatcttgtaataatcttctacaaaatgttccttatgaaatatgagggcatataaggtgtgttatacacaaacgggaagcaagaagaa  25271700                                                                     ----------->GT1                                  <---------AHL20(2)                 <------MYB46(1)                              <-----------TBP                        <------MYB83                            <-----------TBP                      --------->ATHB12                            <---------CCA1(2)                   <---------YAB1               ---------->DOF2--------->AHL20(2)              --------->ANAC55(2)      --------->CCA1(2)<---------LBD16                        <---------ANAC55(2)   <---------ZAT6   --------->CCA1(2)                   <------ZmHOX2a(1)               <---------YAB1 --->GT1   <---------PCF2--------->LBD16   ----------->GT1   <-------TEIL           <---------GLK1(2)   aattagagttatgggcccaaagttatgcgcatatatataatcaaatcgaaaaactgtaggaaatacatgataggtcaaaaaaccctgattttcatttgaa  25271800                        --------->LBD16                       <---------ANAC46                       --------->HSFB2a(2)                   ------>ZmHOX2a(2)                  <------ZmHOX2a(2)                  =================HOX2a_HOX2a                 <---------ARR11(3)                 --------->ARR11(3)                 <---------ARR14(2)                 --------->ARR14(2)                                       <------ZmHOX2a(1)            <---------ARR14(2)                                         <---------HSFB2a(2)            --------->ARR14(2)--------->CCA1(2)                        --------->HSFB2a(2)           <---------GLK1(1) <---------ARR14(2)                   --------->ARR11(3)           --------->GLK1(1) --------->ARR14(2)                   <---------ARR11(3)          <---------ARR11(3) --------->ARR11(3)                  --------->RVE1(1)          --------->ARR11(3)<------ZmHOX2a(1)                    --------->CCA1(1)        <---------YAB1 <---------HSFB2a(2) --------->ARR11(3)  --------->YAB1      --------->YAB1  <---------LBD16    ----------->ARR10     --------->AHL20(2)     --------->ICU4================HOX2a_HOX2a                <---------ATHB12                      -   gacgacgatgatgatatccgatcttccggaggatatggtagaagagatactgtctagggtttcaataatatctctaggagcattgagatggaacgattta  25271900                                                    <---------YAB1 <---------TOE1(2)                                                  --------->YAB1   <---------TOE2(3)                                           <---------ANAC58     ------>ZmHOX2a(2)                                          <---------At4g35610  <------ZmHOX2a(2)             <-------                                        <---------ZAT14       <---------ARR11(3)        <---------ARR11(3)                                        --------->ZAT14 ---------->DOF2                 --------->ARR11(3)                                       <---------MYB52(1)--------->DAG2 <---------MYB46(3)------>ZmHOX2a(2)         <-----------HVH21--------->GLK1(2)<---------ANAC58   --------->ARR11(3)--------->YAB1 --------->DOF2   ---------->DOF2 ----------->RAV1(1)--------->YAB1<---------TOE1(3)--------->CCA1(2)   tctaaagctcgggtcatatgtaaagcagaagctagacaacagtttgctggtttcatgataaagggatctaaggtttgttcaatgagatttgatcttcatg  25272000                                                                      --------->ARR11(3)                                                                      <---------ARR11(3)                                                                     --------->GLK1(1)                                                                     <---------GLK1(1)                                                                     --------->RVE1(1)                                                                     <---------RVE1(1)              -                                                                    --------->ARR11(3)        <------                                                                    <---------ARR11(3)        <------                                                           <---------ICU4                     <------                                      --------->DAG2       --------->YAB1          --------->ATHB12<- --AtLEC2                            ---------->DOF2      <---------ATHB12      <----------DOF2   <--   gaatccaaaataacaacgtcgaagtagttgagccatctataaagcaaatagctaagtttaatcatgttgagatatctcaagtctttcattgcgatggctt  25272100        <---------YAB1      --------->ATHB12      -------->HAHB4      --------->YAB1      <---------ICU4     <---------ATHB12     --------->ICU4                  <-------PIF5    <---------TOE2(3)      --------->ZAT6                       <---------ARR14(2)            <------ <---------YAB1          ----------->RAV1(1)               ----------->GT1                   <------- -------->TOE2(3)      <---------At4g35610           --------->ARR14(2)                  <---------ANAC58 ---ANAC58             --------->At4g35610           <---------ARR14(2)                  <---------ANAC58 ---ANAC58            --------->ANAC58             --------->LBD16                  <------ZmHOX2a(1) ---ANAC46            --------->ANAC58   <---------ANAC46<---------LBD16        --------->TOE1(2) --------ZAT6      <-----------HVH21 ------->PIF5 --------->ANAC55(2)           --------->TOE2(2)   - -------YAB1    <------ZmHOX2a(1)  <-------TEIL   <---------ANAC55(2)   <---------DEAR3(2)   <-------   attgttaatgatgagtaaggaggtcagcaacactaggctcgtggtttggaacccgtatttggggaaaatatggtcgattcaacataggagtgcttatcat  25272200                                    ---------->DOF2                        --------->TOE2(2)                                  --------->At5g28300                      --------->TOE1(2)                                 ------->GAMYB                         <XXXXXXXXXXXXXXXXXXXXMIR4243                                 --------->TOE2(3)                   --------->ANAC46                              ------->GAMYB                    --------->AHL20(2)                        --------->YAB1        --------->ARR11(3)     <---------ANAC55(2)                       <---------YAB1         --------->GLK1(2)<---------AHL20(2)                     --------->GLK1(1)        <---------ARR11(3)     --------->ANAC55(2)            <                     --------->CCA1(2)        --------->ARR14(3)     --------->ANAC58           <---- ---ICU4            --------->ARR14(2)        <---------ARR14(3)   <-----------GT1             <----- --ATHB12           <---------ARR14(2)  --------->TOE2(3)  <---------AHL20(2)       --------->AHL20(2) -------->LBD16 <---------LBD16  --------->TOE1(3)     <---------RVE1(1) <---------ARR11(3)    <----- --YAB1   --------->ARR14(2) --------->MYB46(3)     <---------TOE2(3)--------->ANAC58          <-----   tccgaaaacaggtatactctcggatatgataacaaccgtaaaccacaaaatcttgaggtattttataaattacgaaatctacgattttaaatctcattcg  25272300  Previous    Next  AGI:  At1g67455.1    Description:  F-box family protein. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G67450.1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G60560.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 25271808    to: 25273138    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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