Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->ANAC58   <----------DOF2   <---------DAG2 ------TEIL--------->YAB1 ---->ANAC55(2)<---------ANAC55(2) -----ANAC55(2)--------->ANAC58 ----------AtSPL8                                                        --------->LBD16 --------->AtSPL3                                               --------->TOE2(3)  --------->ANAC46 --TEIL   <---------YAB1                 <---------YAB1  --------->ZAT6 --------->ANAC58      <------ --------->AtSPL8                  ------->TEIL     --------->YAB1      --------->ANAC58    <--------   gtacacttttttttgataagtaagtagaattctattgaacctgatgagagttgagcataactctattcttagacccgaaaactactcaccatgtttattt  25265400             --------->ATHB12         <---------ICU4         --------->ATHB12         -------->HAHB4                                                          --------->MYB52(2)        <---------YAB1                                                         <--------P        <---------ATHB12                                                       <---------MYB52(1)       <---------TOE2(3)                                                     <---------MYB46(3)     <---------AHL20(2)                                                      <------MYB46(1)    --------->AHL20(2)                                                       <------MYB83 ---YAB1--------->ICU4                    ----------->GT1      ---------->DOF2<-------GAMYB -AHL20(2) <---------WOX13(1)--------->ANAC46  --------->MYB46(3)          <--------P   tagagatttaatgatggattggacagtttttaggccatattacatagtaacaactaatttcaactaaaagaatgcaagttggttagtttaatacaaaaca  25265500               ------>ZmHOX2a(2)              --------->GLK1(1)                                    --------->YAB1              <---------GLK1(1)                               <-------GAMYB             <---------AGP1                                  <---------MYB46(3)             --------->ARR11(3)                              ----------->GT1             <---------ARR11(3)                       --------->AHL20(1)            <---------CCA1(2)         --------->AHL20(2)    <---------TOE2(3)   <---------ATHB12   ----------->GT1                <---------AHL20(2)  --------->AHL20(2)      --------->WOX13(1)   <---------ZAT6                 --------->AHL20(2) --------->AHL20(2)      <---------AHL20(2) ----------->GT1    <---------At4g35610<-----------GT1<---------AHL20(2)     --------->AHL20(2)   aaatagtgaaaattggatctctagctcattttccgattaattaacttattttcaaaaaaattgtggttataagaacgaattaatcaattgcatttcttat  25265600                                                <---------ANAC46                 --------->TOE2(3)                                                <---------ANAC58               -------->P                                                <---------ANAC58               ------->TEIL      ----                                   <---------AHL20(2)                     --------->GLK1(1)     -----                      <-----------GT1      ----------->RAV1(2)            <---------GLK1(1)  <-------                  --------->ARR11(3)       <---------At4g35610           --------->ARR11(3)<---------ANAC55(2)         --------->ICU4        --------->AHL20(2)                        <---------ARR11(3)--------->ANAC55(2)   --------->DAG2 <---------ARR11(3)    <-------TEIL                    <------ZmHOX2a(1) <---------ICU4  ---------->DOF2<---------RVE1(1) --------->AHL20(2)                 <---------TOE2(3)  --------->ICU4   aaaaaaaagtaatgaagagagattttacttacataaaataaatacatctggcctgatgaaacaaaaatgagtaaggatatcaacctttgtaataagtaat  25265700                                    ---------->DOF2                                <---------YAB1                                    <---------TOE1(2)                              <--------HAHB4                                --------->ARR14(2)                              <---------ICU4                           --------->TOE1(2)                              --------->ATHB51           --------->ANAC58<---------TOE2(2)   <-------    <-----------GT1           --------->ATHB12           --------->ANAC58<---------TOE1(2)   <------- ------->GT1                 <---------YAB1         <----------ID1     --------->TOE2(2) <----------- ---->ICU4           --------->ATHB12         --------->YAB1      <---------AHL20(2)    --------->ATHB12 --AHL20(2) --------->YAB1   --------->ICU4  --------->AHL20(2)   --------->AHL20(2)----------->GT1   tgttaattaccaattcatagtcttgatgggcattattagaaagcccattaaaaatggacaaggcccatttaaacctaggtttcgcagggtttattgcttc  25265800                                                                  <------NtERF2<----------DOF2                                                                --------->ANAC46                                                                >>>>>>>>>AtERF-4                                                                >>>>>>>>>AtERF-1                                                                >>>>>>>>>AtERF-2                                                                --------->DEAR3(1)                                                                --------->RAP2.3(2)                                                                --------->RAP2.3(3)                                                   --------->ARR14(2)      <---------WOX13(1)                                                  <---------ARR14(2)    <---------YAB1                                                  --------->ARR14(2)   --------->At5g28300                                                  <---------GLK1(2)   --------->YAB1                                              <---------At4g35610<---------RAP2.6(3)                                              --------->At4g35610------>NtERF2<---------ANAC58                                              ------>NtERF2     >>>>>>>>>AtERF-3      <---------AHL20(2)                   --------->At4g35610  >>>>>>>>>AtERF-5            <--------    ----------->TBP                        --------->ZAT14      --------->RAP2.6(2)   <---------ANAC58 --ANAC58                                  <---------At4g35610 --------->ERF1 <---------ANAC58  ----- --ANAC58                               --------->At4g35610    --------->RAP2.3(1)    <---------ANAC58 -CBF ----------->TBP *TSS              ----------->RAV1(2)   --------->At4g35610  <---------WOX13(1)   actcttatataaaaactctcgtcttcacaaatctcacatctcttctgcagccgattcttctattagccgccatggtaattgcttaattgcttaagcttct  25265900                                                                                              -------                                                                                          --------->ANAC58                                                                                   --------------->AtSPL3                                                                               --------->At4g35610                                                                               <---------At4g35610                                  <---------ARR11(3)                          <---------TOE1(2)                                  --------->ARR11(3)            <----------DOF2--------->ZAT2 -------                                 <---------GLK1(1)              --------------------->WRI1--------->ANAC58      <---------CCA1(2)      <---------HSFB2a(2)       <-----------GT1        <---------TOE2(2)     < -GLK1(2)                  -------->ZAP1             <----------DOF2         <-----------RAV1(2)    - ---->HSFB2a(2)         ----------->HVH21         <-----------GT1  <---------At4g35610    --------->ANAC46   caaactccatctctcttctcgctgatttgacctagaaatcttcttccctaattttctttaccctgtctttgctgatttcgcaggtgaagtactcgcaaga  25266000                                                                     <----------DOF2                                                                    ------>ZmHOX2a(2)                                                                    =====================HOX2a_HOX2a       --------->YAB1                                             --------->ARR11(3)                <    --------->WOX13(1)                                    ---------->ID1           <---------MYB52(1) -->ANAC58                                                <---------MYB52(1)      ------>ZmHOX2a(1) < -->ANAC58                                               <-------GAMYB            <----------DOF2   - ---------ETT(1)       ---------->DOF2       --------------->AtSPL8<---------------AGL15            - -------->ANAC46<---------ZAT6<---------ANAC46  <-----------GT1   <---------ARR11(3)      <---------YAB1   acccgacaatcagaccaagtgtaagtaaagctccttgtatcaacttcttagtaccatttcgttgttttgatctttgtggtaatcctttggttttgatttt  25266100                                <-------TEIL                        ------>ZmHOX2a(2)                       <------ZmHOX2a(2)                  <------ZmHOX2a(2)                 <---------ARR14(2)                 --------->GLK1(2)                 --------->ARR14(2)                <------ZmHOX2a(1)                                          --------->KAN4(2)     <---------AtLEC2 <---------ARR14(2)                              <---------YAB1 ---------At4g35610   --------->ARR14(2)                           --------->ICU4               ----- ---------ZAT2  ==============HOX2a_HOX2a                       <---------YAB1                  ----- -------->ZAT2  ===============HOX2a_HOX2a              <-----------HVH21<---------YAB1        <----- -------->At4g35610------>ZmHOX2a(2)    <---------TOE2(3)     --------->YAB1     <---------REM1(1)   gcagcttgcaaggctagaggatccgatcttagggttcacttcaaggtatgtatagctctgtcaattgtcattttgattattcgatgtagttagatttatg  25266200                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)                                                                      --------->ANAC55(2)                                                                      <---------ANAC46                                                                      <---------ANAC55(2)                                                                      --------->ANAC58                                                                      --------->ANAC58                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)                             <---------WOX13(1)                  --------->GLK1(1)                           --------->ATHB12                     <---------ARR11(3)                         --------------->AGL15                  <---------ARR14(2)                 ----------->GT1                 <-------GAMYB  --------->ARR14(2)                <---------TOE1(3)               <-----------RAV1(1)  <---------TOE1(2)  <------ZmHOX2a(1)   <-----------GT1       <---------GLK1(1)   <-----------ARR10 ---->YAB1      <---------TOE2(3)    --------->DAG2             --------->ARR11(3) ---->ATHB12    --------->MYB59     ---------->DOF2       ----------->HVH21                      <--- ----YAB1   <---------ZAT6<---------YAB1    --------->GLK1(1)   <---------AGP1   --------->LBD16 <---   attaggagattgtagttttaggttaaacctgattgagaaaaagcagagttctgttgcaatttgacagatctcacgtatacttcagggaaattgaattggt  25266300  Previous    Next  AGI:  At1g67430.1    Description:  60S ribosomal protein L17 (RPL17B). Identical to 60S ribosomal protein L17-2 (RPL17B) [Arabidopsis Thaliana] (GB:P51413;GB:O64803); similar to 60S ribosomal protein L17 (RPL17A) [Arabidopsis thaliana] (TAIR:AT1G27400.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74145.1); similar to ribosomal protein [Petunia x hybrida] (GB:AAL09401.1); contains InterPro domain Ribosomal protein L22/L17, eukaryotic/archaeal; (InterPro:IPR005721); contains InterPro domain Ribosomal protein L22/L17; (InterPro:IPR001063) Range:  from: 25265822    to: 25267452    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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