Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <-----------GT1                                                      --------->AHL20(2)                                                      --------->YAB1           <---------At4g35610                    <---------YAB1       --------->ZAT6                         <-------GAMYB          --------->YAB1   --------->At5g28300                        ----------->GT1        <---------ICU4  ----------->GT1 --------->ARR14(2)         ----------->GT1    --------->AHL20(2)       <---------MYB52(1) ----->YAB1--------->At4g35610            ------------>AtMYB77  <---------AHL20(2)   <------ZmHOX2a(2)   catactgtaactctgctacaaatctacagtagcattactgaaaatgacagttaaaattataaacattttaatcaccacaaactttggatcagttagcatt  25254000                                                       <----------DOF2                                              --------->AHL20(2)                                              <---------AHL20(2)                                              --------->AHL20(1)                                              <---------AHL20(1)                                              --------->ARR11(3)                                              <---------ARR11(3)                                             --------->AHL20(2)                                   ------->TEIL<---------AHL20(2)  ------->TEIL                       <---------ARR11(3)  --------->AHL20(2)     <---------CCA1(2)<---------YAB1 <--   ttggaaatagtgatgagaaatactagttcttaaaatgaacataaaaaatatattttgcattttggattgtatctaatctcacattatgagagcaaaataa  25254100                                                      <---------ANAC46                                                      --------->ANAC55(2)                                                      <---------ANAC55(2)                                                      <---------ANAC55(1)                                      <---------TOE1(3)                             --------->YAB1           <------MYB83                            <---------YAB1           --------->MYB59                          <---------ICU4         --------->ATHB12                          --------->YAB1    <---------YAB1                         --------->ICU4  <---------ARR14(2)                     <------ZmHOX2a(1)<---------TOE2(3)                    ----------->GT1  <---------At5g28300              <---------ICU4              <---------AHL20(2)    <-----------GT1  --------->MYB111(1) <-----------GT1             --------->AHL20(2)<---------YAB1  <---------WOX13(1)    <---------AHL20(2)         --------->ICU4  <---------ATHB51--------->ARR14(2)    <-----------GT1                  ----- ----ZmHOX2a(1)    <---------TOE2(3)--------->MYB52(1)<------MYB46(1)--------->AHL20(2)  ----------->GT1   ggagataaacaaagattaaataaggaaattatgataatttacggttccgattgattaggtgttattaactattaattactatgtcgaaacagagtaacac  25254200                                                                                                   --                                                                                           --------->ALFIN1                                                                                         <---------ANAC58                                                                                         --------->O2                                                                                         <---------ANAC55(1)                                                                                         <---------ANAC58                                                                                         <---------ANAC46                                                                                         <---------ANAC55(2)                          <------ZmHOX2a(1)                                              --------->ANAC55(2)                        <---------TOE2(3)                                                <---------bZIP60(2)                     <----------CDC5                                                     <---------O2                     =========================MYC_MYB                                    ============                    ----------->RAV1(2)                                                  <---------TGA1a                    --------->ZAT2                                                      ----------->STF1                    --------->At4g35610                                                <---------TGA2(2)                  <---------RAP2.6(2)          --------->ALFIN1                       ----------->HVH21                  --------->ATERF1(2)       <------NtERF2        --------->SPL7       ----------->TGA1                  <---------ATERF1(2)     <---------DEAR3(1) --------->LBD16 <---------At4g35610   --                 --------->RAP2.6(3)     <------NtERF2      ------->GAMYB    <------MYB46(1)<--------                 --------->DEAR3(2)  <-----------HVH21      =======================================MYC_MYB                 <-----------------AGL1<---------DEAR3(1)   <------------------SPL14--------->At4g35610                --------->MYB52(1)  --------->TGA1a        <------------AtMYB77     --------->CCA1(2)              <---------SPL7        --------->O2           --------->MYB46(3)<------MYB83--------->TGA1a             --------->ANAC58       <---------TGA1a        ========================================MYC_MYB             --------->HSFB2a(1)    <---------O2      --------->ANAC58  --------->ALFIN1----------->bZIP911(2)             <---------HSFB2a(1)    ====================================MYC_MYB--------->ALFIN1  ----             --------->ANAC58<---------At4g35610--------->ZAT18 --------->MYB52(1)  <---------At4g35610 =============================================bZIP_DOF--------->ANAC58 <------ZmHOX2a(1)----------->bZIP910(1) ---------->DOF2------->TEIL --------->At4g35610<---------ZAT18<---------SPL7--------->At4g35610----- ---->ANAC46--------------->AtSPL3  ================================MYC_MYB <---------DEAR3(1) ------   ggcgaaagagagggaacgtaccggctgaggaagcagagacgtcgtcggagtgggcttcgcaaccgcgaacggaggagggaggtgagagatgacgtgtccc  25254300                                                                           <---------ANAC58                                                                           <---------ANAC58                                                                        ------->MYC3                                                      <------MYB46(1)   <-------PIF5                                                      <------MYB83      <-------MYC3        --------->GLK1(2)     --------->WRKY12     <---------ZAT2       ------->MYC4     <---------ARR11(3)      <---------MYB52(1)    <---------MYB52(1)   ------->PIF5     --------->ARR11(3)     <-------GAMYB         --------->LBD16       ------->MYC2 ------->ANAC58        --------->At4g35610        ------>NtERF2         <-------MYC2 ===================================MYC_MYB     <---------LBD16        <---------ANAC58 ------->ANAC58        --------->GLK1(1)<---------CCA1(1)              <---------ANAC58 ---HVH21              <---------GLK1(1)<---------RVE1(1)       <------NtERF2 -->NtERF2             <---------At4g35610    <-----------GT1  --------->LBD16 ------>HVH21      --------->ANAC58    --------->ARR11(3)     <---------ANAC46      --------->ZAT14 --->DEAR3(2)      --------->ANAC58    <---------ARR11(3)    <---------LBD16    <-----------GT1  *TSS   gacgcatgatattctgacaactcgcatctccgttgaactgagatattttctccggctggttttggcggagagaacgtgcttgttactactctctcttgcg  25254400                                                                 ------->MYC2                                                                 ------->MYC3                                                                 <-------MYC3                                                                 <-------MYC2                                                                <----------TaMYB80                                                               ---------->TaMYB80                                                            <---------ANAC46                                                         <---------ATHB12            --------->ATERF1(1)                          ----------->HVH21           <---------ATERF1(1)                       ------------>CBF                        <-------           ------>NtERF2                            --------->ANAC58               --------->ANAC46          ----------->HVH21                         --------->ANAC46           <-----------GT1          --------->DEAR3(1)                        --------->ANAC58          <---------YAB1 --------       <---------DEAR3(1)                         --------->MYB52(1)        --------->YAB1   --------   <---------At4g35610         ------------>CBF   <---------DOF5.7(2)       <---------ICU4   <-------   --------->At4g35610 <-----------TBP          --------->DOF5.7(2)        <---------YAB1 --------->AHL20(2)   aagtctgcttcggcgactgcgacttatttatagcacaattcgtctaattagttaacgcaatgacgcatatgcccttcattataactcgacacttaaatgt  25254500                                   <---------ICU4                                  <---------YAB1                                   ----------->HVH21                                 --------->ARR11(3)                                <---------ETT(2)                 --------------->AGL15                                           <-------GAMYB                 <---------------AGL15                                           --------->At4g35610                ----------------->AGL2                                           <---------At4g35610         <----------DOF2         <---------ARR11(3)                             <------MYB46(1)    <---------ALFIN1            --------->YAB1                                  <---------DEAR3(2)   --------->ZAT14             <---------YAB1                                   <------MYB83 --------->REM1(1)      ----------->GT1                                         <---------MYB46(3) --------AtSPL3 <-----------------AGL2                                         <---------DEAR3(1)   < ------->AtSPL3 ----------------->AGL1            <-----------GT1              <---------MYB46(3)   < ------->AtSPL8 <-----------------AG <---------YAB1         --------->LBD16  <-----------HVH21<------ --------AtSPL8 <-----------------AGL1   <-----------GT1  <---------LBD16--------->MYB52(1)   <------   actacaacactcttttggaccagttttggtaatatgatcattttagccatttctactgtctccggttcaaatagattacggtcggttgacaagtttgctt  25254600        --------->ARR14(2)        <---------ARR14(2)      --------->LBD16                                                         --------->ARR14(2)     --------->HSFB2a(2)                                                      --------->ARR11(3)     --------->ANAC46                                                 <---------ANAC46     --------->ANAC55(2)                                              <---------REM1(1)     <---------HSFB2a(2)                                              --------->ALFIN1    <---------LBD16            ----------->HVH21                    <---------ANAC46 ----------DOF2              --------->At4g35610                 <---------ANAC46 ---------DAG2               --------->CCA1(2)                   <---------LBD16     <---------YAB1 ---ANAC58            --------->YAB1                   <---------At4g35610    <---------ARR14(2) ---ANAC58       <---------ANAC46          <-----------GT1      <---------LBD16   ------>ZmHOX2a(1)   cacttttccggaaccatttgcctatagtaagagatgacagagatttaacgacgcttgaactgatatttcggggtgtagaagttcctgatgaatagcatac  25254700                                                     <----------DOF2                                                 <---------CCA1(2)         <----------DOF2           --------->bZIP60(1)       <-----------RAV1(1)      --------->MYB46(3)    --------->ZAT18            ------->TEIL --------->ANAC46----------->RAV1(1)            <---------ZAT18   tagtagtaccctgacttcatcatctatgcaatgtacctattgttgcacatcatctctttgtgcaacaacgattccttctttcaattcaactagtagactt  25254800                                           --------->ARR11(3)              --------->YAB1               <---------ARR11(3)      <<<<<<<<<<<<<<<<<LFY            --------->ANAC58            --------->DAG2             >>>>>>>>>>>>>>>>>LFY            --------->AtLEC2           ---------->DOF2         <---------ARR11(3)                   -            --------->ANAC58     ----------->GT1        <---------PCF5--------->MYB52(1)     <-------   caaccatatagtccaagcacaatggagtctgaatgcagaaaaaaagttcttgtttaggggaccaagataacccaatggagtctcttatttcttagcatac  25254900  Previous    Next  AGI:  At1g67400.1    Description:  similar to phagocytosis and cell motility protein ELMO1-related [Arabidopsis thaliana] (TAIR:AT3G43400.1); similar to phagocytosis and cell motility protein ELMO1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93689.2); contains InterPro domain Engulfment and cell motility, ELM; (InterPro:IPR006816) Range:  from: 25251651    to: 25254397    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g67410.1    Description:  exostosin family protein. similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT1G74680.1); similar to Os01g0921300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045226.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66191.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) Range:  from: 25254856    to: 25257330    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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