Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <------ZmHOX2a(2)                                                                                        --------->AGP1                                                                                        <---------ARR11(3)        <---------ANAC55(2)                                                      --------->GLK1(1)        --------->ANAC55(1)                                                      <---------GLK1(1)        --------->ANAC55(2)                                                  ------>ZmHOX2a(2)        ----------->GT1                                                     --------->CCA1(2)        --------->ANAC58                                                    --------->At4g35610    --        --------->ANAC58                                                    <------ZmHOX2a(2)     <--        --------->ANAC46                                                   <---------ARR14(2)   -----  <---------WOX13(1)                                                       <---------AGP1============ ----->At4g35610                                                           --------->ARR14(2)   ----- ----->ZAT2  <---------MYB52(2)                                            --------->AGP1============ ------At4g35610                                 <----------ID1            --------->ARR11(3) <------ ------ZAT2  --------->MYB46(3)              ---------->DOF2              <---------GLK1(1)   ------- ------RAV1(2)   --------->YAB1   <---------GLK1(2)          --------->YAB1<---------ARR11(3) -------   gctgattaacgcgtaacaaacatagaaactgttcacgattcttcagattaagcgaaaaactaagtataagagaacgagatctgaaatccagatcaatatc  25247100                                                                                  <---------HSFB2a(2)                                                                                  --------------->AGL15                                                                                  --------->HSFB2a(2)                                                                                -------->P                                                                             <---------ANAC58 ------->ANAC46                                                              <---------ANAC58 -------------------WRI1                                                    <---------At4g35610    <- ---->TOE2(2)                        --------->TOE2(3)                      --------->At4g35610    <- ==================HOX2a_HOX2a --------->ANAC58                            <-----------ARR10       -- ---->TOE1(2)                  --------->ANAC58                      ================================ ======================HOX2a_HOX2a  ----------->GT1                  ------>ZmHOX2a(2)            --- ---ARR11(3)                   --------->ANAC46                      <---------DEAR3(1)           === -->ARR11(3)    <------ZmHOX2a(1) ------->TEIL                    --------->ATHB12<---------------AGL15 -->ARR14(2)<------ZmHOX2a(1)<-----------GT1            ---------->DOF2   <------NtERF2       <------   tacgaaaatcaccaggaaggagctagaaatttcacgaatcgttaagaaacaaaaactcaaaagctcgatgatcggcgtagcttaccagaagaagcgagtc  25247200         ------>ZmHOX2a(2)        <---------GLK1(1)       --------->ARR11(3)              <---------LBD16       <---------ARR11(3)             ----------->RAV1(2)      --------->ZAT14     --------->At4g35610                  --------->ANAC58 --------At4g35610        ----------->RAV1(2)                  --------->ANAC58 --------ZAT2           <---------GLK1(2)                 --------->ANAC58 ------->ZAT2--------->At4g35610      --------->At4g35610 --------->ANAC58 ====HOX2a_HOX2a       --------->At4g35610      --------->ANAC58 --->ZmHOX2a(1)        <---------At4g35610      --------->ANAC58----------->GT1 ===============HOX2a_HOX2a         <---------ALFIN1      --------->ANAC46                      ----- ---ARR14(2) <---------At4g35610  <-----------HVH21     --------->MYB52(1)         --------->ARR11(3)   ctgctcagtgatctctgcttccttcagcttctgagccatcacctggaggtaagaaacaaaacgaaacgctaaaatcagactgagagaacttgaacagagc  25247300                                                   ------>ZmHOX2a(2)                                                --------->ATHB12                                     ----------->GT1          <---------At4g35610               -----                                    ======================HOX2a_HOX2a               --------->ALFIN1                                    <------ZmHOX2a(1)    <---------GLK1(1)    <---------HSFB2a(2)                                   ----------->GT1 <---------DEAR3(1)         --------->HSFB2a(2) ------>GT1                --------->MYB52(1)  <---------YAB1 --------->At4g35610   ----------->GT1   gaaaatttcatagactaagatgaagaacgagacggagaggagaaaattgatgatcggcgatttctgctctcaccatttttgcagaagtgtgaaacgaata  25247400                  <---------GLK1(1)             <------NtERF2           <---------DEAR3(1)          <------NtERF2         <-----------HVH21        <---------DEAR3(1)    <-------TEIL  --------->GLK1(1)  --------->ARR14(2)                                    <---------AHL20(2)  <---------GLK1(2)                                     --------->AHL20(1)                --------->ZAT6  <---------ARR14(2)                     ----------->GT1--------->AHL20(2)               <---------YAB1 ---->MYB52(1)  <------ZmHOX2a(1)<------ZmHOX2a(1)     --------->AHL20(2)       <-----------GT1     *TSS   acgagattcgtcgtcggaggaattctcagagagaaggagggaagagaaaatttcaaaaaaaattgaaaatggagagaatgtttatcagtttatgactagt  25247500              ------>ZmHOX2a(2)             <------ZmHOX2a(2)            --------->ARR11(3)            <---------ARR11(3)           --------->GLK1(1)                                                      ----------->GT1           <---------GLK1(1)                                            <---------YAB1      <---------HSFB2a(2)  <---------HSFB2a(2)           <---------At4g35610     ----------->GT1    --------->ALFIN1       --------->HSFB2a(2)        ---------->DOF2<---------ZAT6             <----   gagggagtctgggagatcgtttgaagtttatagaaatggagaagaatatttagtggcaaagctgatatttagtggtgatagcatgggtaaaatcgactaa  25247600                 <---------RVE1(1)                 <---------CCA1(1)                <---------AHL20(1)                --------->AHL20(1)                                                         <---------RVE1(1)                --------->ARR11(3)                                                         <---------CCA1(1)                <---------ARR11(3)                                                        <---------ARR11(3)          --------->ANAC58        <------MYB46(1)             --------->ARR11(3)          <---------ARR14(2)          --------->ANAC58        <------MYB83         ----------->GT1                    --------->ARR11(3)         ------>NtERF2  <---------ZAT6     <---------ZAT6     <---------ARR11(3)    <---------HSFB2a(2) --------CBF---------->DOF2 <---------DOF5.7(2) ---------->DOF2                     --------->HSFB2a(2)   ttgtgtaacgacgcgaaagatatttagtggtaacgttggtatttagtgacaaaagcagggtcaatatcgtctattcgtttcaacgtccagaagatattta  25247700                                                           <-------TEIL                                                        --------->ANAC58                                                        <---------ANAC55(2)                                                        --------->ANAC55(2)            <---------MYB52(1)                                                        --------->ANAC58              <-------GAMYB                                                   --------->YAB1                    <---------MYB46(3)        <------MYB83                              <---------YAB1    ------>NtERF2    --------->MYB52(2)        <------MYB46(1)                        <---------YAB1    --------->At4g35610<-------TEIL  <---------DOF5.7(2)                        <-----------GT1---------->DOF2    ---------->DOF2   ggggtaacgttggtatttgagatggtagtaggggcaatatagtctaattactataatcacgtacaagcgctgccaaaatccaaaagttcgttgctcttct  25247800                                                                     ------>MYB83                                                                     -------->P                                                                     ------>MYB46(1)                                                             <---------At5g28300                                                        <---------TOE2(3)        <---------AHL20(1)                  --------->AHL20(2)                    <---------TOE1(3)        --------->ARR11(3)                  <---------AHL20(2)                  <---------AHL20(2)        <---------CCA1(2)         ------>NtERF2           <---------YAB1      --------->AHL20(2)------->GAMYB        <---------ALFIN1       --------->YAB1     --------->AHL20(2) >>>>>>>>>MYB98     --------->PCF2<---------AHL20(2)         <---------YAB1<-----------GT1  <-------TEIL     --------->ANAC46       --------->HSFB2a(2)  <---------YAB1     <---------ALFIN1   taactggaccccaccctgattttaatttttctagtataattttgttttttgattatttaatgttacagcccaacccaggctcatatattgtttttgggtt  25247900                                                                                                  ---                                                                                ---------->DOF2   ---                                                         <-----------GT1        <---------DOF5.7(2)                                                        <<<<<<<<<<GT-3b---------->DOF2          -----                                               <---------MYB52(1) <----------DOF2              ------                    <----------DOF2         ---------->ID1---------->ID1      --------->DOF5.7(2) ---       --------->AHL20(2)       xxxxxxxxxxxxxxxx>smallRNA(i)<----------DOF2 ----------->GT1  <-------   tagccccaattacatttctgttcttttgaaaattttgttttgtttcttcgttttgtatttttctttttctttcaaaagtcgttaaagacttgaaataacc  25248000  Previous    Next  AGI:  At1g67370.1    Description:  ASY1 (ASYNAPTIC 1); DNA binding. similar to ASY2, DNA binding [Arabidopsis thaliana] (TAIR:AT4G32200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66172.1); similar to aysnaptic 1 [Brassica oleracea var. alboglabra] (GB:AAN37925.1); contains InterPro domain SWIRM (InterPro:IPR007526); contains InterPro domain DNA-binding HORMA; (InterPro:IPR003511) Range:  from: 25242780    to: 25247500    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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