Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------ANAC46       <---------ANAC58  <---------AHL20(2)  --------->AHL20(2)  --------->ATHB51  <---------ICU4 --------->ICU4                                                                       ---------->DOF2 ------->YAB1                                                               --------->ANAC58 -------AHL20(2)                                                          --------->MYB52(1) ------>AHL20(2)                                          --------->MYB52(1)--------->ANAC58   <----- ------DOF2                         ---------->DOF2  ---------->DOF2     <---------ARR14(2)   <------ --ALFIN1           --------->AHL20(2)           --------->YAB1       <------ZmHOX2a(1)       ------- -GT1  <---------ANAC58  ----------->GT1     --------->ANAC46  <---------ANAC46 ----------->RAV1(1) -   ttaattatttcttggagataaaaaaaatagcaaaataacaaagttacacaaaaataaaagtaacgtcgtagaggagaaacggcaacaaaaaagaagtaac  25233500          --------->ATHB51          --------->ATHB12      <---------WRKY18(1)         <---------YAB1         <-----------GT1      <---------AHL20(2)       --------->WRKY12                           <---------MYB52(1)      --------->AHL20(1)       ----------->HVH21                         --------->TOE2(3)      --------->AHL20(2)   <---------ANAC58                            ------>MYB83      <---------AHL20(1)   <---------ANAC58              <---------ANAC55(2) ----At5g28300          ------>ZmHOX2a(1)                --------->ANAC55(2) -----GT1<---------AHL20(2)<---------ANAC46            <-----------GT1 ------>MYB46(1) -->MYB52(1)           <---------ANAC58       <---------DAG2--------->MYB52(1) ---------->GT1        <---------ANAC58       <----------DOF2----------->RAV1(2)       --------->ZAT6   cgttgtaaaatattattggctgattccttacgtttgacctctctctccctttatttgttacatacctgatacctcccttaatcgctcttacactctcgtg  25233600                                                       >>>>>>>>>>AtMYB44                                             <---------ICU4                                             --------->ATHB51                                             -------->HAHB4                                            <---------YAB1                                            --------->ICU4                                          --------->YAB1                                          <---------ICU4                                     --------->AHL20(2)--------->MYB52(2)                           <-------GAMYB --------->ICU4--------->MYB111(1)              --------->ANAC46     ----------->GT1     --------->MYB46(2)              --------->ANAC58    --------->DAG2       --------->MYB59              --------->ANAC58   ---------->DOF2    ------------>MYB.PH3(2)       --------->LBD16     --------->At5g28300--------->MYB52(1)                         <-----------GT1      --------->ANAC58    ----------->GT1<---------AHL20(2)                     ------>ZmHOX2a(1)      --------->ANAC58  <---------LBD16  <---------ATHB51                  <-----------GT1        <--      --------->ANAC46  --------->LBD16  --------->AHL20(2)  <----------DOF2<-----------GT1       ---   atttagacgcgcgactaagcaatttccacggttaaaaaagtaaataattatcggagttagttactttcaaacaatttttatcctttgaaaaaaaccattt  25233700                 ------>ZmHOX2a(1)               ------>ZmHOX2a(2)              <------ZmHOX2a(2)             --------->ARR14(2)             <---------ARR14(2)             --------->ARR11(3)             --------->ARR14(3)                                                                    <-             <---------ARR11(3)                                                --------->ZAT6     ---             <---------GLK1(2)                                          --------->DAG2            ---             <---------ARR14(3)              --------->TOE2(3)      --------->TOE2(3)             ---            --------->RVE1(1)          --------->YAB1              --------->ANAC58               ---           ----------->ARR10        <---------AHL20(2)             --------->ANAC55(2)     ------->GAMYB         ---------->DOF2           <---------AHL20(2)              <---------ANAC55(2)    --------->ANAC46    <---------HSFB2a(2)         <---------AHL20(2)                 <---------ANAC46       --------->MYB46(3)    --------->HSFB2a(2)         --------->AHL20(2)                 --------->ANAC58  <-----------HVH21 -------------AGL15            --------->AHL20(2)      <---------YAB1  ---------->DOF2 <---------WRKY12 ------------>AGL15      <-----------GT1  <-----------GT1         <-------TEIL<---------ZAT14   <----   cgatttatagaaaaagatcctctaatttctctatttatttattgtaacctcataaatattcttgaagctacgtaaaagcgaacactgtgtcaacgacgct  25233800    --------->LBD16   <---------LBD16   --------->LBD16  <---------LBD16                                             --------->ANAC58 -------->ZAP1                                           ------->TEIL <---------LBD16                                      --------->ANAC55(2) --------WRKY18(1)                           <---------GLK1(2)--------->ANAC46                     -- ------>WRKY38(1)                           <---------ZAT2    --------->ANAC58                     <- ------>WRKY12                              --------->At4g35610                                  <--- ------>WRKY45                              <---------At4g35610                          <----------DOF2 -------->HVH21 ---------->DOF2       <----------DOF2 <---------ANAC55(2)             <---------ALFIN1 ------DOF2<----------ID1 ----------->GT1   --------->ZAT2   ------->TEIL            --------->MYB46(3)   ttgaccggggaataagacaaaagtacaagggtaaactcgtcttttcagcttcgcatacgtatgtacgcagaagagagaaacaactcaaccactttgtata  25233900       ---------->DOF2   --------->ANAC58                                                                           -------   --------->ANAC46                                                                           -------   --------->ANAC58                                                                       --------->ANAC46 ------->YAB1               *TSS     --------->CCA1(2)               ---------->DOF2  <-----------GT1 --------AHL20(2)      --------->CCA1(2)      --------->GLK1(2)---------->DOF2     <---------YAB1 --------TBP      ---------->DOF2  --------->CCA1(2)       ------>ZmHOX2a(1)   --------->ARR11(3)   tttataagccaaagagaataaaaagatagacacagagagataagagagagtctgtgtaatcctctcaaagacaaagaagaagattatgttaccctcaaga  25234000                                                                                            ---------                                                                                     --------->HSFB2a(2)                                                                                     <---------HSFB2a(2)                                --------->HSFB2a(2)                                 <---------LBD16                                <---------HSFB2a(2)                                --------->MYB52(1)                                --------->LBD16                                    --------->SPL7                               <---------LBD16                                    --------->ARR14(2)                               <---------ANAC46                                   <---------ARR14(2)                         <---------ZAT14                <---------MYB46(3)       <---------SPL7                         --------->ZAT14             <-----------RAV1(1)         <---------MYB52(1)--                    ----------->HVH21                --------->ALFIN1           --------->LBD16   ---         <-----------ARR10    <---------LBD16  <------NtERF2                   --------->ANAC46  <---   --------->MYB52(1)   <----------DOF2       ------>NtERF2                   <---------LBD16   ----- -->ANAC58        ------>ZmHOX2a(1)          --------->DEAR3(1)               <-----------------AGL1 -->ANAC58      ----------->RAV1(2)         --------->RAP2.3(1)      ------>ZmHOX2a(1)--------->LBD16   aaaactaagagagtcttctcctgtgactttactccgggaagaaaacgccgacgatgtgttgttgttccttcctctgtttctccggtaccggaaaacacaa  25234100      --------->ARR14(2)      <---------ARR14(2)     <---------RAP2.6(3)                --------->ZAT6   <------NtERF2                ------>ZmHOX2a(2)  <---------At4g35610          <------ZmHOX2a(2)  ------>NtERF2               --------->ARR14(2) <---------ARR14(2)           <---------ARR11(3) --------->ARR14(2)           --------->ARR11(3)                                <---------At4g35610 >ANAC46                      <---------ARR14(2)                                <---------ZAT2 ------->LBD16                <---------ARR14(3)                                --------->At4g35610 ---->GAMYB             --------->HSFB2a(2)                                    ------>ZmHOX2a(1)    < ------LBD16            <---------HSFB2a(2)                           --------->HSFB2a(2)           - ---->MYB52(1)   <-------TEIL --------->ARR14(3)                      <---------HSFB2a(2)    <-------   ccggagccgatttgctagattcaattccagacgatcttgttatctctatactttgtaaacttggctctacttctcgatgtcctgctgatttcatcaacgt  25234200              ----------->HVH21             <-----------HVH21            <----------DOF2          <---------At4g35610      <---------SPL7     ==================bZIP_DOF     <---------TGA1a     --------->TGA2(1)     <---------ANAC55(2)     ==============================================bZIP_DOF     <---------TGA2(1)     --------->ANAC55(2)     <---------ANAC58     <---------bZIP60(1)     <---------ANAC58     --------->TGA1a     <---------ANAC46                   <----------DOF2     ====================================bZIP_DOF     --------->bZIP60(1)              <---------DEAR3(2)     <---------O2<---------LBD16    ---------->ID1   <---------TGA2(2)          <----------DOF2        <---------CCA1(2)  ----------->TGA1       --------->ARR11(3)      <---------ANAC58  ----------->HVH21      <---------ARR11(3)      <---------ANAC58             <----------DOF2 ---------At4g35610     <---------CCA1(2)      --------->ARR14(2) --------->ATHB12 -------->At4g35610----------->GT1<-----------RAV1(1)---------->ID1>>>>>>>>>ARR2            <-------- --TOE2(3)--------->At4g35610 <---------DAG2   <---------ARR14(2)<---------YAB1   <---------LBD16  --   tttgctgacgtaagctttcaccggttatatctctttttgtcggttttcggttcttgtctctctaattttgattgtgttttcttttggggaacagatgtaa  25234300                                                                                      --------->KAN4(2)                                                                                     <---------HSFB2a(1)                                                                                     <----------TaMYB80                                                                                     --------->KAN4(1)                                                                                     --------->HSFB2a(1)                                                                                     <---------KAN4(1)                                                                                    ---------->TaMYB80                                                                                    <---------KAN4(2)                                                 ---------->DOF2         --------->ATHB12                                          <---------ARR11(3)             <---------ICU4        <------ZmHOX2a(1)    <-----------RAV1(1)------>ZmHOX2a(1)        --------->ATHB51    ---------->DOF2     ------>ZmHOX2a(1) --------->ARR11(3)            --------->ICU4--------->ARR14(2) -REM1(1)           ------->TEIL       <---------GLK1(2)                <---------YAB1<---------ARR14(2) --------->GT1   <---------YAB1    --------->ETT(2)             ---------->DOF2 --------->ETT(1)<----   gagattaaaaggattagctatgaatcctattgtgttgtcgagattatctcctaaagctatcgctgttaaagctcataattggtcggaatattctcaccgg  25234400  Previous    Next  AGI:  At1g67340.1    Description:  zinc finger (MYND type) family protein / F-box family protein. Identical to F-box protein At1g67340 [Arabidopsis Thaliana] (GB:Q9FYF9); similar to zinc finger (MYND type) family protein [Arabidopsis thaliana] (TAIR:AT5G50450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66168.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Sel1-like (InterPro:IPR006597); contains InterPro domain Zinc finger, MYND-type; (InterPro:IPR002893) Range:  from: 25233928    to: 25235503    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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