Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------YAB1 ---------->GT1                                                                        <-----------RAV1(1) ------->DAG2                        ----------->GT1                                 --------->CCA1(2) ------->DOF2                       <---------TOE1(3)                               --------->ARR14(2) --->TOE2(3)                        <---------TOE2(3)                   --------->CCA1(2)  <---------MYB46(3) --->TOE1(3)             --------->YAB1                  --------->ANAC58           <---------ARR14(2) --->YAB1               <---------ATHB12                 --------->ANAC58           --------->ARR11(3) ---YAB1              --------->WOX13(1)        ------>ZmHOX2a(2)    <---------YAB1 <---------ARR11(3)   taaagtaatatgaatacagttcgtcaatcagcaaggctaaggtaattcgatctctattcaagcatgggatgaagatagagattggagatatgttggatga  25217100                                                                                          <---------SPL7                                                                                          --------->ZAT14                                                                                          --------->ZAT18                                                                                          <---------ZAT14                                                                                        <------------                                                                                       <---------ANAC46                            <------ZmHOX2a(1)                                      <---------At4g35610                           <---------bZIP60(2)                                     --------->At4g35610         ----------->GT1--------->ALFIN1                                    <---------ANAC46---------   gttgcagtaagttgtgaaaaacgaaggtgaggaggctgttttggacaagtgtatcacacatttgcgatagaattagaggctgggaagcagagtgtacgat  25217200                                                                                     <---------ANAC58                                                                            --------->ATHB12    -----                                                                            --------->YAB1 --------->ANAC58                                                                           <-------TEIL    --------->ANAC58            ---------->DOF2          <---------ARR11(3)               <-----------GT1<---------ANAC46          <------MYB46(1)            --------->ARR11(3)               <---------AHL20(2) <--------P     <---------TOE1(3)          <--------P                        <---------AHL20(2) <---------ANAC58     <---------TOE2(3) <---------------AGL15                  <----------DOF2       <---------At4g35610 ---AtSPL3<------MYB83 --------------->AGL15               <---------ARR11(3)    <---------ANAC58 >SPL7  <--------P  <---------ARR11(3)    <----------DOF2  --------->ARR11(3)    <---------ANAC58   agaaattgaggttggaaagcagggtcttataagggtaagtatctctttcttctcttaagaatgtctttttatttacattcattgtttgctggtaagaaag  25217300                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                <----                                                                                             <-------                                                                                           <---------ICU4                                                                                          --------->ICU4                    --------->ICU4                                                        <---------YAB1               --------->ANAC46  --------->CCA1(2)                                      <---------ICU4               --------->ANAC58  <---------GLK1(1)        ----------->GT1               <--------HAHB4               --------->ANAC58 <---------ARR14(2) --------->AHL20(2)                   --------->YAB1        ------->TEIL<---------ATHB12           <---------YAB1                          <---------YAB1 ------>GT1 --------->ZAT14     --------->ARR14(2)<---------YAB1                 <---------YAB1 -----   gtttattctgtatgtgcaggcaatgactaagttggatatgtgagtatatatgattatatatggttaattatctattatctactatgtttatcattatttt  25217400                                                                                         <-----------                                   <---------CCA1(1)                                   <---------AHL20(2)    <---------DAG2                 <---------RVE1(1)                                  <---------AHL20(2)    <----------DOF2               <---------ARR11(3)                                  --------->AHL20(2) ---------ZAT14                   --------->ARR11(3)                           --------->ANAC55(2) -------->ZAT18                  --------->YAB1                                <---------ANAC55(2) ---------ZAT18                 <---------YAB1                               <-----------GT1 -------->ZAT14    --------->AHL20(2)                <---------AHL20(2)  <---------AHL20(1) -----------AtSPL8 <---------AHL20(2)                <-----------GT1     --------->AHL20(2)        <- --YAB1  <----------DOF2      --------->YAB1    --------->AHL20(2)       <---------AHL20(2)        -- ---------->AtSPL8--------->AHL20(2)         --------->YAB1              --------->AHL20(1)     -----   agtacacttttcttttgatatttaattttgtatgatgatattttttgtcataaatttacttacaaaatttgataatttattacataatttaaattgctat  25217500               <----------DOF2          <-----------GT1                     <-----------GT1        ------>ZmHOX2a(2)  <----------DOF2                 <---------AHL20(2)                <------ZmHOX2a(2) <---------ICU4*TSS               --------->AHL20(2)               --------->AGP1 -CBF <---------YAB1            <---------------AGL15        --------->At4g35610 --------ARR11(3)       <---------DAG2       --------->AHL20(2)    <---------ARR11(3) ------->ARR11(3)       <----------DOF2----------->GT1       <---------At4g35610 ------>TBP<-----------GT1     --------->TOE2(3)   <---------YAB1  --------->ARR11(3)  ----------->GT1   aaatctttactattacccttttaaaacttttttcattaaaatggaaataaactatatttgatcagttgagatctatatttaagagaagtgagtaaattag  25217600                             <---------ANAC58        <---------ANAC58                             --------->ANAC55(2)     --------->TGA1a                             <---------ANAC55(2)     <---------ANAC58                             <---------ANAC58        <---------TGA1a                          --------->TOE2(2)<---------WOX13(1)                         --------->YAB1  -------->HAHB4                        <---------ATHB12 <---------ICU4                 --------->ZAT6                      --------->WOX13(1) --------->ATHB12            --------->WRKY38(1)          <--                    <------ZmHOX2a(2)    <--------ATHB1              --------->WRKY12          <-----               <---------ARR14(2)       --------->ICU4<-------PIF5   --------->WRKY45       <--------               --------->ARR14(2)       <---------ATHB12            <---------MYB52(1)    <----------              =============HOX2a_HOX2a  <---------YAB1------->PIF5  --------->DOF5.7(2)--------->ATHB51              <------ZmHOX2a(1)        <---------TOE2(3)          <---------MYB46(3)   <---------ICU4 ---------->DOF2 ------>ZmHOX2a(2)    --------->YAB1------->TEIL <-------TEIL      <---------YAB1 <--   attaaaagaacaacgaggatcgatcaatcatacgtgccattaatgattgagacggacgtgcttcacattcgttgactctaccattagcattatttctcca  25217700                                                                            --------->YAB1                                                                 --------->ANAC58                                                                 --------->ANAC58                                                                --------->DAG2                                                               ---------->DOF2<---------YAB1 --------DOF2                          <---------At4g35610<---------------AGL15 ----ALFIN1------>ZmHOX2a(2)           --------->At4g35610--------------->AGL15 ---GT1   <------ZmHOX2a(2)     --------->ARR14(2)     <---------ALFIN1    <---------ATHB12 -GT1     --------->GLK1(1)     <---------ARR14(2)--------->ANAC58        ------>MYB46(1)        ---- -------DAG2              <-----------GT1         --------->ANAC58        ------>MYB83         ------   ctttctcatccgatctcttcaccttgtataaccatatactcatcagcctctctcgccaaaccccaaaaagcaaaccaaacatgattcaagacaagtctaa  25217800                               --------->ARR14(2)                               <---------ARR14(2)                        ------>NtERF2                             <---------ANAC46                       --------->RAP2.6(2)                       --------->RAP2.3(1)     --------->ANAC58 <---------RAP2.6(2)        <---------At4g35610<------NtERF2                <---     --------->ANAC58--------->At4g35610         --------->ZAT2  <------NtERF2                -------   ---------->DOF2   <---------At4g35610         <---------ZAT2 <---------ORA47(2)            <------ <-------TEIL    --------->HSFB2a(2)     --------->ALFIN1       <---------ATERF1(1)   <-------TEIL ----->DAG2      --------->HSFC1(1)------>ZmHOX2a(1)           --------->ALFIN1   --------->ANAC58 ---->DOF2       <---------HSFB2a(2)   <-----------RAV1(1)     <---------DEAR3(1) --------->ANAC58   aggtgcaaagcaaacgcttctagagcggccatggttcctcgctgtggctctagctggtcttataggtggcgcaatgctcatcacaagcttcatccgagct  25217900                                                                   --------->ANAC46                                           <---------ANAC58        --------->ANAC58                --                                           <---------ANAC58        --------->ANAC58               ---                                           <---------ANAC46       ------>NtERF2                   ---                         --------->ANAC46 <-------TEIL           <---------ALFIN1                 ---                        <---------LBD16--------->ZAT2   <---------ARR14(2)                      <----     <---------ALFIN1  <---------ALFIN1----------->RAV1(2)       --------->DEAR3(1)            ------ ------LBD16       --------->At4g35610 <---------ZAT2   --------->ARR14(2)                  <-------- -->ZAT2           <---------At4g35610 <---------At4g35610       --------->RAP2.6(2)        --------- ---ZAT2   <-----------HVH21           --------->At4g35610      --------->MYB46(3)  <---------ATHB12   acggacaacaccttgtcactctgctccacggctaagaacacagctgcgtctatagccaaatacacagccaccccaatccaactccaatccatcgtccact  25218000  Previous    Next  AGI:  At1g67328.1    Description:  other RNA Range:  from: 25217506    to: 25218713    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g67330.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G27930.1); similar to unknown [Populus trichocarpa] (GB:ABK93495.1); contains InterPro domain Protein of unknown function DUF579, plant (InterPro:IPR006514) Range:  from: 25217515    to: 25218837    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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