Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->MYB46(3)                                                ------>MYB46(1)                                                ------>MYB83                                               --------->MYB52(1)                                              --------->AtMYB61                                              ------->GAMYB                                             <---------MYB52(2)                        --------->GLK1(2)         <---------GLK1(2)                   <---------MYB55(2)                       <---------GLK1(2)       --------->ICU4                        --------->MYB46(3)               <---------ICU4       <---------YAB1                       --------->ANAC46                 --------->ICU4     --------->YAB1                  ----------->GT1                     <---------ZAT14  <----------DOF2                  <------ZmHOX2a(1)                     --------->ZAT14          --- ------HVH21                    <-----------RAV1(2)                    --------------->AtSPL8    >>>>   caagctttcatgattctgcaatatgaagagtacctcaggaggtttcaaccaacggctatgagcttcttgatacagagtactaatttcatattctgagaag  25206400                                                          <------ZmHOX2a(1)                                                   <----------DOF2                                                  <---------ANAC58       <----------ID1                       <---------------------WRI1       ----------->GT1                  --------->DAG2 --------->HSFB2a(2)     --------->MYB52(1)                ---------->DOF2 <---------HSFB2a(2)                        --- -------->GT1                       <---------ANAC55(2)<---------LBD16                           xxxx >>>>>TBF1         <---------ZAT6  <-------TEIL   <---------ANAC58   <---------GLK1(1)          -----   aagaaaaaaacgaaaaatgtagtcttagtcatcgaaatacataaagtttgatgctttcgaggaaaatgaagaaacccctcaaaactcaccagattgcata  25206500                                                                                      --------->At4g35610                                                                                      --------->GLK1(1)                                                                                      --------->ZAT2                                                                                      <---------ZAT2                                                                                  ------>ZmHOX2a(2)                                                            <------MYB83          ===================                                                            <------MYB46(1)     <---------ARR14(2)                                                            <---------MYB46(3)  --------->ARR14(2)     ----------->HVH21                        --------->TOE1(2)                <------ZmHOX2a(1)     ----------->TGA1            --------->WOX13(1) ==================================HOX2a_HOX2a ------>MYB46(3)             --------->WOX13(1)     <------ZmHOX2a(2)        <---------TOE2(3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       --------->YAB1--------->MYB59 --------->CCA1(2) ---->MYB52(1)       <---------ZAT6 --------->YAB1 --------->ARR11(3)    --------->CCA1(2)   acgactggtgacgaattgaagtagagtaagtcaatctatcaagacaaacatgagatcaagtttggttcggaagagagataaggatcggagctcgagacag  25206600                                                                --------->AHL20(2)                                                                <---------AHL20(2)           --------                                                                --------->ATHB51             --------                                                                <--------ATHB1               <-------                                                                <---------ICU4              <--------                                                               --------->ICU4     --------->ANAC58                                                          ----------->GT1         --------->ANAC58                                                        ----------->GT1         --------->MYB52(1)                 --------->SPL7                   ---------->DOF2    >>>>>>>>>>WRKY63   ---------->DOF2 <------ZmHOX2a(1)<---------YAB1             <----------ID1    <---------ATHB51----------->TGA1 =======HOX2a_HOX2a       ---------->DOF2 --------->CCA1(2)  --------->YAB1    ----------->HVH21   acaggagttgctaaaccagtacgatagacaaagaagaagagaagatagagacaaaagaaggtgtaataatttgactatggactgacgaaataaagaatct  25206700                         --------->GLK1(1)                   ----------->RAV1(1)                  <---------ETT(1)               <---------ARR14(2)               --------->ARR14(2)             <---------HSFB2a(1)                                                       --------->AHL20(1)       ========================RAV                                                     <---------AHL20(1)       <-----------RAV1(2)                                                             <---------AHL20(2) <------ZmHOX2a(1)----------->HVH21             ----------->HVH21           --------->ANAC58 ->ARR14(2)  --------->HSFB2a(1)               <-----------HVH21     ------>ZmHOX2a(1) --------->AHL20(2) ->GLK1(2)   --------->HSFC1(2)         <--------P <-----------RAV1(2)      --------->ANAC58 --ARR14(2)  <---------HSFC1(2)        <-------GAMYB<---------TOE2(2)----------->RAV1(2)     <------- -GLK1(2) <------ZmHOX2a(1)           <---------MYB46(3)---------->DOF2  ----------->HVH21<---------YAB1   gaaggattagcaggagggttccgacagatagccacgaagatggttgctatgtcacaggtaaaggaattatcctctgcgacgctactcattttattattag  25206800                   <-------PIF5                   ------->MYC4                   <-------MYC2                   ------->MYC2                                                         <---------YAB1                   ------->PIF5                                                        <---------AHL20(2)                   <-------MYC4                                                        --------->AHL20(2)                   ------->MYC3                                                   --------->AHL20(1)                  --------->O2                                                    <---------AHL20(1)                  <---------O2              <---------GLK1(2)                     <---------AHL20(2)                  --------->PIF3(3)         --------->ARR11(3)                    --------->AHL20(2)                  <---------PIF3(3)         <---------ARR11(3)               --------->AHL20(2)                  <---------TGA1a           <---------ARR14(2)              --------->AHL20(2)                  --------->ANAC46          --------->ARR14(2)          <---------AHL20(1)                  --------->TGA1a    <-----------HVH21                  --------->AHL20(1)                <---------ALFIN1    --------->ALFIN1                    --------->AHL20(2)        <---------WOX13(1)   ------>ZmHOX2a(2)                          <---------AHL20(2)      --------->ATHB51     <---------ARR11(3)  --------->AHL20(2)      <---------AHL20(2)         ---     <---------YAB1<-------MYC3     <-----------RAV1(1)                --------->AHL20(2)    <-------     <---------AHL20(2)<---------ANAC46   <---------TOE2(2)     <------NtERF2<---------AHL20(2)   <--   --------->HSFB2a(2) <---------ANAC58   <---------TOE1(2)    ----------->GT1   <---------AHL20(2)  <-----------------AGL3   --------->ARR11(3)  <---------AHL20(2)    --------->YAB1   --------->AHL20(2) --YAB1<------------CBF<---------ANAC58<---------ANAC46      --------->ATERF1(1) --------->AHL20(2)   ttcttctataattgatacccacgtggcatgatcttagagtgtcgcagattttatttctatggagtcggcaaaaataaattaaaataaattaaaattaaca  25206900                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                               <-----                                                                                              ------>NtERF2                                                                                              <------                                                                                             <-------                                                                                            ---------                                                                       <---------ZAT18     ------->PIF5                              --------->ANAC58                         <---------ZAT14     <---------                              --------->ANAC46                       <---------------AtSPL8<-------PIF5                              --------->ANAC58                      <---------ANAC46      ===========                              <---------ANAC55(2)            <---------ANAC58             --------->O2       <---------ICU4         --------->ANAC55(2)      <----------DOF2<---------ZAT6      --------->ANAC58       --------->YAB1        <---------LBD16           =============================================bZIP_DOF      --------->ICU4        --------->MYB52(1) <---------ANAC58   --------->ZAT14         <---------TGA1a      <---------ATHB12 ------------>CBF        <---------ANAC58   <---------ZAT14         --------->ANAC46 ---->MYC3           --------->ANAC46         ---------->ID1 <---------ANAC58             --------->TGA1a ----GT1       <---------ANAC46           <----------DOF2    <---------ANAC46             <---------O2 -----MYC3   <---------MYB46(3)      <-----------GT1  >>>>>>>>>>>>WRKY18 ------->TEIL     --------->ANAC58   tgtgtgaaatcatggtggtttagacgacaattacggaattagccctttgtcgtttgacttttgacttgtgtagtgtacgtagagaaattagcacgtcggc  25207000       ---------->DOF2 ------>ANAC58                                       --------->GLK1(2) ------>ANAC58                                    ------------>CBF ----->SPL7                                      <-----------GT1 -NtERF2               <---------ANAC58       <------------CBF                                 ------ ---DEAR3(2)           <---------ANAC58    ------------>CBF         <----------DOF2       --------->MYB52(1) --DEAR3(1)            <---------ANAC46    <-------TEIL      --------->ICU4               ---------->DOF2 >RAP2.6(3)    ------------>CBF          --------->ZAT18  <---------MYB52(1)         ---------->DOF2 --HVH21   <---------------AtSPL8      <---------------AtSPL8<---------YAB1       --------->TOE2(3) =================bZIP_DOF            <---------ANAC46  ----------->GT1          --------->REM1(1)  -   acgacgattaaaagtagtacaatttgcctgtgaaaaacttgagggtacaattgacaatctgttattatttctttgtgtaatctacatcaaagtaaaggag  25207100                                                                ----------->GT1                                                        <---------ANAC58                   <---------YAB1                       <---------ANAC46                  --------->ARR11(3)                    ----------->GT1          --------->ANAC46                              <---------ANAC58                          ---          --------->ANAC58                        <------ZmHOX2a(1)                            ------ --------->DAG2   <---------ARR11(3)            --------->MYB59--------->DAG2                -------- ----->GT1--------->ANAC58  <------NtERF2<---------------AGL15 <---------TOE2(3)          --------->AHL20(2) --------->DOF2  --------->YAB1          --------------->AGL15 <---------TOE1(3)         --------->AHL20(2)   aaaaaagtgtccaagaaaatgatatttggctgcatagcattttcttgaattaggaattgggtgataaggttttattcaagaacatgacaaaataaaaaag  25207200                                            --------->AHL20(1)                                            <---------AHL20(2)                                   ----                                            --------->AHL20(2)                          <----------DOF2                                           --------->AHL20(2)                        <---------ARR11(3)                                 <----------ID1              ------>ZmHOX2a(1)  <---------AHL20(2)                            --------->CCA1(2)         <------MYB46(1)       --------->AHL20(2)   <--- ------>ALFIN1  ---------->DOF2  <---------ETT(2)     <------MYB83<---------YAB1--------->AHL20(2) --->DAG2<---------REM1(1) --------->ARR11(3)        <---------AtMYB61      <---------AHL20(2)<------ -->DOF2 ----------->GT1   <---------ARR11(3)       <---------WOX13(1)   ------->TEIL--------->ARR11(3)   gtggtattgagatgtaacaaaagtcaaaagatatatcgacaaaaaaaaaattggattggtgtcctatttttaatgcatttttttaaatgtctttatttac  25207300  Previous    Next  AGI:  At1g67310.1    Description:  calmodulin binding / transcription regulator. Identical to Calmodulin-binding transcription activator 4 (CMTA4) [Arabidopsis Thaliana] (GB:Q9FYG2); similar to ethylene-responsive calmodulin-binding protein, putative (SR1) [Arabidopsis thaliana] (TAIR:AT2G22300.2); similar to ethylene-responsive calmodulin-binding protein, putative (SR1) [Arabidopsis thaliana] (TAIR:AT2G22300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66146.1); similar to Os04g0388500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052630.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048); contains InterPro domain Immunoglobu Range:  from: 25201845    to: 25206789    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version