Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->REM1(1)                                          --------->At4g35610                                         --------->ARR11(3)                                         <---------ARR11(3)                                   <---------TOE2(3)                                <---------WOX13(1)----------->RAV1(1)                              --------->ATHB12   --------->MYB46(3)                         ---------           ----------->GT1   <---------YAB1    ----------->RAV1(1)    --------->YAB1        <--------      <---------YAB1   --------->DAG2 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         >>>>>>>>>CBP60g ------->DOF2         ---------->DOF2<------ZmHOX2a(1)             --------->YAB1  >>>>>>>>>SARD1  --   aaaagcttatgagaagttaaaccaaaaagctgtgattgaggaacatctgcaacaacacaaattgaacaagaatcataaaccagaaatttgggaactttaa  25194000                                                                                           <---------ANAC55(2)                                                                                      --------->ATHB12           <---------HSFC1(1)                                                         <---------ICU4           --------->HSFC1(1)                               <---------DOF5.7(2)      --------->ICU4   ------->GAMYB                           ------->TEIL    <---------WRKY45          <---------YAB1   --------->TOE2(3)                 --------->ATHB12      <---------WRKY12        <------ZmHOX2a(1)< -------->P>>>>>>>ZML2  <---------ATHB12  <---------CCA1(2)<---------WRKY38(1)  <------ZmHOX2a(1)   < >TOE2(3)  --------->HSFB2a(2)       <--------ATHB1   --------->ZAT14         --------->ALFIN1    --- --DOF2    <---------HSFB2a(2)      <---------YAB1    <---------ZAT14    ---------->DOF2   <---------ANAC46 ------->MYB46(3) <-----------GT1   --------->ICU4   <---------ANAC46  ----------->HVH21  <---------LBD16   aacaaccctagttctagaattcactaatcaattggagaatgattgtatctatattgtgtagtcaacgatatatgtgaaaggaggaggatgattacggaga  25194100                                                                                                  ===                                                                                                  ---                                                                                                <----                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              -------             --------->HSFB2a(2)                                                             <-------             <---------HSFB2a(2)                                                           ==========            <---------LBD16                                                                <------ZmHOX2a(1)         --------->GLK1(1)                                                       --------->At4g35610         <---------GLK1(1)  --------->ALFIN1          <-----------RAV1(2)     <------ZmHOX2a(1) ----- ---------ANAC58     --------->ALFIN1             ---------->DOF2 <------MYB46(1)<---------At4g35610- ---------ANAC58    <------ZmHOX2a(1)       --------->GLK1(2)     <------MYB83======================= ------>ALFIN1    --------->ALFIN1      <------ZmHOX2a(1)        <---------AtMYB61 --------->RAP2.6(2)   gtgcgagagagatttctggagaggagggagatggggaagcgaggagaatcagagaagcaggcgagggaaggtcgaatggaggaagcagccataggaatga  25194200 =====================HOX2a_HOX2a --->ZmHOX2a(2) -----ARR11(3) ---KAN4(1)                                                            <----------DOF2 -->HSFB2a(1)                                                          <---------DAG2 ---HSFB2a(1)                                                    ------>NtERF2                  <---- -->ICU4                                                         <---------MYB46(3)          -------- ---->ARR10                             <-------GAMYB            <---------ATERF1(1)         -------- -->KAN4(1)                        <---------ANAC58             --------->ALFIN1           --------->ANAC55(2) --KAN4(2)                 <---------ZAT18        --------->ATHB12<------NtERF2            <---------ANAC55(2) ====HOX2a_HOX2a           --------->ZAT14   <---------YAB1     <---------DEAR3(1)  <------NtERF2 ---->ARR11(3) ------>ZmHOX2a(1)   <---------ANAC58      ---------->DOF2          <---------DEAR3(1) ----->ZmHOX2a(1)     <-------TEIL <---------ANAC46     --------->WRKY18(1)     <-----------HVH21   - ====HOX2a_HOX2a     --------->GLK1(2) --------->ALFIN1<-----------HVH21     ------>ZmHOX2a(1)  -----   tcctcaccatcttcttcctcgagattcagagctctctgcgtgtgttgatgaatgattcgtcaagcggtggctacttttcctccgtcggagattaagtgac  25194300                                                                                                   <-                                                                                                   --   ------->GAMYB                                            <----------ID1                         <- -----bZIP60(1)             <---------AHL20(2)         --------->AHL20(2)                          <- --->TGA1               <----------DOF2              --------->TOE2(3)                <---------AHL20(2) --->HVH21          --------->DAG2     <---------AHL20(2)*TSS            <----------ID1 <------------CBF -------->MYB52(1) ---------->DOF2    <---------AHL20(2)--------->AHL20(2)            --------->AHL20(2) ---->bZIP60(1)<---------ZAT6     <----------DOF2  <-------TEIL   ------------------------>ANAC81 <--   gacaacggtagagactagagataaagcttttttattcttttttattttggagattcattaaaaaaacaaaacaaaaaaacaaaaacaaaaaattgaacga  25194400                         ----------->GT1                    --------->ICU4                    <---------YAB1                  <---------ICU4                  -------->HAHB4            --------->AHL20(2)                  --------->YAB1            <---------AHL20(2)                  <---------AHL20(2)--------->AHL20(2)                 <---------YAB1     <---------AHL20(2)                 --------->ICU4  --------->ATHB12        <------------CBF    --------->ICU4--------->ATHB51 <---------WOX13(1) <----------DOF2        <---------GLK1(2)   <---------ARR11(3)  <---------YAB1    ----------->GT1--------->ATHB12     --------->ARR11(3) --------ANAC58  <---------ATHB51----------->GT1      --------->TOE2(3)    <---------TOE2(3)   <----- ------->ANAC55(2)-------->ATHB1 -------->HAHB4       <---------DAG2  <---------AHL20(2)    --------- --------ANAC58<---------ICU4   --------->ICU4   <---------At5g28300 <---------AHL20(1)    <---------ZAT6 --------ANAC55(2)<--------HAHB4<---------ATHB12<-----------GT1      --------->AHL20(1)    ---------- -----TEIL    --------->ICU4<---------AHL20(2)  <---------ICU4      <---------CCA1(2) --------->YAB1   ttcgtgatatttagacataattattattagttaaatgattaattagttaattactgccttattggaacttatatatttagattttgtattgtaatgttaa  25194500                                                                       --------->ZAT6                                                                     <-----------GT1                                                                  --------->ANAC58                                                                  --------->ANAC58       <------ZmHOX2a(1)                                                                  --------->ANAC55(2)---------->DOF2                                                                  --------->ANAC46--------->YAB1 ----AHL20(2)                                                   --------->ICU4  <---------YAB1 >TOE2(3)   <-----------GT1   --------->AHL20(2)       --------->AHL20(2)     <---------AHL20(2) ->GT1 ------->TEIL          --------->AHL20(2)        <---------AHL20(2)    --------->AHL20(2)   aatgaaatgaattttttcttacttacaaaaaataaaaaatggaatcgatgttggaaaataaatgtcataagtaacactatttattaataaaggactacaa  25194600                      --------->AHL20(2)                      <---------AHL20(2)                     --------->AHL20(2)                   --------->YAB1                    --------->YAB1               --------->YAB1                 --------->AHL20(2)                 <---------YAB1          --------->ARR11(3)         --------->AHL20(2)                       <---------ICU4           <---------CCA1(2)       --------->AHL20(2) <-----------GT1        --------->ICU4       ----------->GT1         <------ <-------GAMYB--------->AHL20(2)       ----------->GT1        <-----------GT1  --------->WOX13(1)   gactgttgaaaaaatataaaataataaataaccattctatatagtgatttcattatgacaattttctccaatttgttatatctatcaaaaaaacatttat  25194700           <--------HAHB4           --------->ATHB51           -------->HAHB4           --------->YAB1           <---------ICU4           <--------ATHB1          --------->ICU4          <---------ATHB51          <---------YAB1          --------->AHL20(2)        --------->YAB1       <---------YAB1       <---------AHL20(2)                                    <-----------GT1      <---------AHL20(1)                                <---------AHL20(2)      --------->AHL20(2)                                --------->AHL20(2)                          -      --------->AHL20(1)           <-------TEIL         --------->AHL20(1)              <---------ANAC58   --------->AHL20(2)          --------->ARR11(3)      --------->AHL20(2) ----------->GT1       ----- --------->AHL20(2)            <---------ARR11(3)----------->GT1--------->TOE2(3)       <---------ANAC58 ---AHL20(2)            ---------->DOF2        ---------->DOF2  --------->TOE1(3) <---------TOE2(3) <   tcaaaaaatataataattacaagaatcaaagaatatatacatgtaagtataaagaaaaaaaattaaccttacaaacatgttatataggtttcgtttcaaa  25194800             --------->CCA1(2)         --------->AHL20(2)      --------->YAB1     ----------->GT1                                                                               -- --------->AHL20(2)                                                                    --------->ARR11(3) <---------AHL20(2)                                                                  ----------->GT1 --------->AHL20(1)                                                           ---------->DOF2     <-- <---------AHL20(1)                                                         <------NtERF2--------->YAB1 -------->AHL20(2)                                                        --------->ANAC46     <----- ---->AHL20(2)                    --------->GLK1(2)  --------->ANAC58    --------->RAP2.6(3)   <----- ---------AHL20(2)    --------->YAB1--------->YAB1   --------->ANAC58  --------->ETT(2)<---------ARR11(3)   aaataaattgataatatatgcatatcaaaattagacaatctgaatccattctccaacgctagggacaccattgtagacggcaaagagaagataataacca  25194900  Previous    Next  AGI:  At1g67280.1    Description:  lactoylglutathione lyase, putative / glyoxalase I, putative. similar to ATGLX1 (GLYOXALASE I HOMOLOG), lactoylglutathione lyase [Arabidopsis thaliana] (TAIR:AT1G11840.3); similar to ATGLX1 (GLYOXALASE I HOMOLOG), lactoylglutathione lyase [Arabidopsis thaliana] (TAIR:AT1G11840.4); similar to ATGLX1 (GLYOXALASE I HOMOLOG), lactoylglutathione lyase [Arabidopsis thaliana] (TAIR:AT1G11840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44041.1); contains InterPro domain Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); contains InterPro domain Glyoxalase/extradiol ring-cleavage dioxygenase (InterPro:IPR011588 Range:  from: 25191937    to: 25194357    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g67290.1    Description:  glyoxal oxidase-related. similar to glyoxal oxidase-related [Arabidopsis thaliana] (TAIR:AT5G19580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65484.1); contains InterPro domain Immunoglobulin E-set (InterPro:IPR014756); contains InterPro domain Galactose oxidase, beta-propeller (InterPro:IPR015916); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043); contains InterPro domain Region of unknown function DUF1929 (InterPro:IPR015202); contains InterPro domain Glyoxal oxidase, N-terminal (InterPro:IPR009880) Range:  from: 25194684    to: 25196900    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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