Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------------AGL15                                --------->CCA1(2)                 --------------->AGL15                                <------ZmHOX2a(2)                ====================================                               --------->AGP1                    ----------------->AGL2                               --------->ARR14(3)                <-----------------AGL3                               --------->ARR11(3)              <-----------GT1                               <---------ARR14(3)          --------->ATHB51                               <---------AGP1              <---------ICU4                               <---------ARR11(3)          <---------AHL20(2)                               <---------ARR14(2)          --------->YAB1                               --------->ARR14(2)          -------->ATHB1                         --------->CCA1(2)                 -------->HAHB4  ------>ZmHOX2a(1)      --------->GLK1(2)                 <--------HAHB4  =====================================HOX2a_HOX2a        <---------ATHB12  --------->LBD16----------->RAV1(1)                      <---------YAB1 ---------->RAV1(2) ------->GAMYB------>ZmHOX2a(2)        <---------ATHB51                     ------ ---------LBD16  --------->MYB52(1)                  --------->TOE2(3)                         ------ ------DOF2   ------->TEIL<-------TEIL ----------->GT1    --------->ICU4             <---------YAB1   tttcctgaaaccgatgaatcaacagagattcaagatctagagagtaagaacagaaccctaattattaacccaatttagaaccctagtaagattgaaacaa  25168300                                                                           <---------LBD16                  --------->TOE1(3)                                       <-------TEIL <---------ATHB12 ===================================================MADS_MADS            --------->CCA1(2) --->MYB52(1)     --------->TOE2(3)      ---------->DOF2<---------ATHB12 --------->GLK1(2) ----->RAV1(1)  ------->TEIL        <---------------AGL15<-----------RAV1(2)  <------ZmHOX2a(1)   cagtttctactcaaattgaaccctaaatttgcgaattgcaaaacaaagtaatcaactaatcaggcgatagaagagattcaggaatgctaatcaaacacac  25168400                                         --------->MYB52(1)              <---------At4g35610      <---------MYB52(2)             --------->ANAC58          --------->MYB46(3)             --------->ANAC58     --------->ANAC58         <---------ANAC46         --------->ANAC46         <---------ANAC58         --------->ANAC58         <---------ANAC58       --------->TOE1(2)                   ---------->DOF2        <---------ARR14(2)      <----------DOF2           --------->TOE2(2)              --------->MYB46(3)         <------ZmHOX2a(1)     <---------ANAC58          --------->MYB46(3)          <---------MYB52(2)       <---------LBD16     <---------ANAC58      <---------MYB52(1)   <-------TEIL --------->MYB52(1)    <---------LBD16<--   ttaagttcctttcgtaagctaatttctcagttaaccaaggaacaaacagattcaatttcaaactaacaaacaaagaaaaactaaatcggggaggatagtt  25168500                                ------>ZmHOX2a(2)                               --------->CCA1(2)                               --------->ARR14(1)                               <------ZmHOX2a(2)                              --------->ARR14(2)                              --------->AGP1                              <---------ARR14(2)                             <---------GLK1(1)                        <------MYB83                                                             ----               <---------ARR14(2)                                                               <----               --------->ARR14(2)                                                            --------          ----------->HVH21  --------->GLK1(1)                                            --------->AtMYB61         --------->SPL7 <------MYB46(1)<-----------RAV1(1)       ------>MYB46(1)          --------->DEAR3(1)      <---------ANAC46  <---------ANAC58                       <---------MYB59            <---------ALFIN1     <-------TEIL       <---------ANAC58               --------->LBD16                   <---------ABI4(2)   --------->ARR14(2)  --------->MYB55(2)             <---------ANAC46                   --------->MYB46(3)   <---------GLK1(2)   <---------MYB46(3)          --------->ANAC46                    --------->bZIP60(1)   <---------ARR14(2) --------->ALFIN1 <---------REM1(1) --------->REM1(2)             --------->ANAC46 ---------GT1<---------YAB1 ----------->ARR10    ---------->DOF2 ------>MYB83        <-----------GT1   ttacagattcgtatgacgattcgagtgggtgagatccgatgatgttgctcttaacgccgtgaagaccaaatcgaagagcgtcgtttttgacaccaccgat  25168600                                                           --------->HSFB2a(2)                                                           <---------HSFB2a(2)                                                      <<<<<<<<<TBF1          <----------DOF2                       <<<<<<<<<TBF1    --------->At4g35610                  xxxxxxxxxxxxxxxx>smallRNA(i)                               < -->ZmHOX2a(2)                       <------------------------ANAC81                  <---------ZAT18 --ZmHOX2a(2)            --------------------->WRI1<<<<<<<<<TBF1 --------->ALFIN1   --------->ZAT2<-- ->DEAR3(1)           >>>>>>>>>>>>>>>>>LFY xxxxxxxxxxxxxxxx>smallRNA(i)             <---------At4g35610   ctcatgagctatctttttctcagactccattgtttacttcgttgttgttcttcttcttcttctgggtgtgtttcgcttcttcttgtagctcgctctgcga  25168700           ---------->DOF2        --------->ANAC58        --------->ANAC46        --------->ANAC58                                 <---------ICU4        --------->AtLEC2            --------->DAG2       --------->YAB1  <---------HSFB2a(2)    ----------->GT1                --------->ICU4  --------->HSFB2a(2)    <----------ID1     --------->CCA1(2)                     <-----------ARR10 <---------LBD16   *TSS---------->DOF2     <----------ID1-------->HAHB4          <---------CCA1(2) ---------LBD16  ----------->GT1   ---------->DOF2      <---------ATHB51 <---------AHL20(2)     <---- --------DOF2   ------------------------>ANAC81       --------->YAB1   --------->YAB1          ------   ctttcgggacaagcaaagtaagaaaaaaagaaaaaaaaaaagtaagagacgaagtttaataatgggctcacataaataatcccaaatctaaggcccatta  25168800                                                                                                   --                                                                                                   --                                                                                              -------                                                                                           --------->YAB1                                                                                    <---------ANAC58                                                                                    <---------ANAC46                                                                   <----------DOF2  <---------ANAC58 -----AHL20(2)                                                     <---------DAG2 <---------ARR11(3) --->AHL20(2)   ---------->DOF2                      <---------AHL20(2)           --------->ARR11(3)   attttgtatttgggcctacaaagatggatttgtttgtctaaattttcttaagaatttttttgttcaaaacttttttttcaacaatgtcttgtttcataaa  25168900                                                                       <-------GAMYB                                                                      ----------->GT1              <------MYB46(1)                                         <------MYB83  <--------HAHB4              <------MYB83                                            <---------MYB46(3)             <---------MYB46(3)                                       --------->MYB52(2)             <---------AtMYB61                               <---------DAG2<---------YAB1            <--------P                                       <----------DOF2        --------->ATHB51           <-------GAMYB                       --------->ANAC58     <--------P      <---------ICU4     --------->AHL20(2)                        --------->ANAC58    <-------GAMYB   --------->ICU4     <---------AHL20(2)                        --------->ANAC46   <---------MYB46(3)--------->ATHB12 ------->ANAC58                     <----------DOF2         <---------ANAC58       <---------YAB1 --- ------->ANAC58               --------->ARR11(3)            <---------ANAC58<---------ICU4      <---- --->DOF2 <---------MYB46(3)  <---------ARR11(3)      --------->ATHB12<------MYB46(1) <---------YAB1   gaagcaattttttggttggtcattttttcaactatcttctttcatacataagcaattcatttgctttttggttggttataatttcattattagttatttt  25169000                 --------->ATHB51                 --------->AHL20(2)          <---------ICU4          --------->YAB1          -------->HAHB4         --------->ICU4       <--------HAHB4       --------->YAB1       <--------ATHB1       <---------ICU4                   --------->ANAC55(2)       -------->HAHB4                   <---------ANAC58       --------->ATHB51                 --------->TGA2(1)      --------->AHL20(2)                <---------ANAC58                                        -----      <---------ATHB51                  <---------TGA2(1)                                       <----      --------->ICU4                    <---------ANAC55(2)                                    <-----      <---------YAB1                    <---------ANAC46                <---------ARR11(3)     <-----    --------->YAB1                      <---------bZIP60(1)             <---------GLK1(2)      ------  --------->AHL20(2)   --------->YAB1   --------->bZIP60(1)        <-----------GT1       ----------->GT1 ------>ANAC55(2)<---------AHL20(2)    ----------->STF1    ----------->GT1           --------->GLK1(1) -------GT1 <---------YAB1           ----------->TGA1      <---------ANAC46          <---------GLK1(1)   acatattaataattatgaattattttcatactacaaaaaatgacgtaagacaatgactgtgatgtgaatttacagattttaaaactgaaatctgtaaatt  25169100                                                                           --------->WOX13(1)                                                                       ----------->GT1                                                                  ------>MYB83                                    --------->ARR11(3)            ------>MYB46(1)                              --------->MYB59                   <---------------AGL15                              <---------TOE2(3)                 --------------->AGL15            ----                            <---------MYB52(1)                  <---------MYB59----------->GT1------- ---->AHL20(2)             <----------DOF2  <----------DOF2     --------->TOE2(3)             ------- -----AHL20(2)         <-----------GT1 <----------DOF2         <---------ANAC55(2)       <---------TOE1(3) ----AHL20(1)       <----------DOF2 <---------ARR11(3)         --------->ANAC55(2)       <---------TOE2(3) ----AHL20(2)    ---------->ID1   >>>>>>>>>GT-1                ----------------->AGL1    <---------YAB1 --->AHL20(2)   <-----------GT1----------->GT1  <---------YAB1 ----------------->AG   <---------AHL20(2)   attttcaaagtattcgtttttccttttacctttaggtaaatcttttctttatgtttatattcaatacctaattttgtaaatcagtaaatttatggtaagc  25169200  Previous    Next  AGI:  At1g67250.1    Description:  proteasome maturation factor UMP1 family protein. similar to proteasome maturation factor UMP1 family protein [Arabidopsis thaliana] (TAIR:AT5G38650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49284.1); contains InterPro domain Proteasome maturation factor UMP1 (InterPro:IPR008012) Range:  from: 25167305    to: 25168719    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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