Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------GLK1(1)                                           --------->LBD16                                          --------->HSFB2a(2)                                          <---------HSFB2a(2)                                         <---------LBD16                                        -------->P                                        --------->MYB52(1)                                       ------->GAMYB                                      <---------MYB111(2)                                      <---------MYB111(1)                                      --------->MYB46(3)                                      <---------MYB46(2)                                      <---------MYB55(2)                                      <---------MYB52(2)                                     ------>MYB83                                     ------>MYB46(1)                                  --------->MYB46(3)                             --------->ANAC46 --------->GLK1(1)                             --------->ANAC58<---------ARR14(2)                         --------->YAB1--------->MYB55(1)                                 <---------YAB1 ------>DOF2 <----------DOF2 --------->ANAC58--------->ARR14(2)                     <---------CCA1(2) -TEIL     <---------At4g35610    --------->DEAR3(2)       --------->MYB46(3)   --------->TOE2(3)   < ->CCA1(2) --------->At4g35610 <------ZmHOX2a(1)         --------->MYB52(1)     --------->TOE1(3)   <   aaagatgaaaatcagctctatggtcgaacataaggaaccaactaccggaactcgctaaacaacgactcgtagacatatcaaaccctaaatctctgattat  25130500                                                                           ------>ZmHOX2a(2)                                                                       --------->KAN4(1)                                                                       <---------KAN4(1) ------MYB46(1)    <------ZmHOX2a(2)    <---------MYB52(1)            <---------KAN4(2) ------MYB83     <------ZmHOX2a(1)  ------->TEIL                 ---------->DOF2    <---------MYB46(3)   gtaggttttgttttcatgaggatcaaacaacttacatgaaccgttgttttcgacatttttgtttggaaaaagaatgatccatggagttgttggatttgtt  25130600                 --------->ANAC58                 --------->ANAC46                 --------->ANAC58                                           --------->ZAT18       <---------WOX13(1)                                           --------->At4g35610    --------->WRKY38(1)                    ------->TEIL             <---------At4g35610    ----------->HVH21                   --------->ANAC58           ------->TEIL                     <    --------->WRKY12----------->RAV1(1) --------->ANAC58        --------->ANAC46                    <  --------->At4g35610                <---------ARR14(2)       --------->MYB52(1)                    <  <---------At4g35610                --------->ARR14(2)--------->YAB1  ---------->DOF2          -----   actccgatgactgatttcgaagcaacataccatgttgaagaaacgcatctcgctcgatgaaaatcaacgaagctcaagcgctccaagattaatctaacta  25130700              <------NtERF2              --------->At4g35610              <---------At4g35610             --------->RAP2.6(2)          --------->ANAC46      --------->CCA1(2)   --------->ANAC58   --------->ANAC58                             --------->ARR14(2)   --------->ANAC46   --------->HSFB2a(1)       <---------ARR14(2) ---------WRKY38(1)  --------->ARR14(2)   <---------ANAC58                                 --------->YAB1 ---------WRKY12     <---------ARR14(2)   <---------ANAC58    ------>ZmHOX2a(1)       ------------>CBF -------TEIL<---------ZAT18 ------>ZmHOX2a(1)   <---------GLK1(2)<----------DOF2     <-----------GT1 ---->MYB59 <---------RAP2.6(2)        <-----------GT1   <---------At4g35610  <-----------GT1   ggtccacgatataggccgcttcgaatcgtccttccatattttttccgtcggaatcgctcatctccttcttttgtgctatttcacgattttcaatcttagg  25130800                 <---------ANAC46              --------->ALFIN1            <---------ANAC58            --------->TGA1a                                                                    <-----            <---------TGA1a                                                                  <-------GAMYB            <---------ANAC58                                                                <--------            <---------ANAC46                                                                <--------            --------->O2                                                                    <--------            <---------O2            --------->DAG2            <---------ANAC55(2)<---------AHL20(2)            <---------bZIP60(2)    ---------->DOF2            ----------->GT1 --------->AHL20(2)            ==================================bZIP_DOF     --------->ICU4     <---------ARR11(3)           <-----------------------TaNAC69(2)              <---------MYB52(1) --------->AHL20(1)   <---------At4g35610        ------------>CBF    <------------CBF           <---------CCA1(2)<------   gtttgtgctcagagacgtgggggagaagatgagtcaataaagttaatgaggctattgggccattatgtaaaataggcccatatattaatgggtttcgttg  25130900                                                 ----------->GT1                                          ---------->DOF2                                       <------NtERF2                                      --------->LBD16                                      ------>NtERF2       --------->YAB1                --------->DEAR3(1)                       --------------------->WRI1       --------->TOE1(3)             --------->RAP2.3(3)                     <---------ANAC58       --------->TOE2(3)             --------->ATERF1(2)                     <---------ANAC58     <---------ARR11(3)              <---------ATERF1(2)                 <---------MYB52(1)     --------->ARR11(3)              --------->RAP2.6(2)              <---------MYB52(1)    <---------GLK1(1)               --------->RAP2.6(3)               <------NtERF2 ----TOE1(2)                      --------->ANAC58                   ------>NtERF2 -ANAC58                          --------->ANAC46                   <-----------HVH21 -ANAC58                          --------->ANAC58                  --------->DEAR3(1) -ANAC46 *TSS             --------->AHL20(2)   ---------->DOF2--------->TOE1(3) ---MYB52(1)       <------ZmHOX2a(1)<---------LBD16          <---------HSFB2a(1)   gattagaaatcttaacttgtaggaaaaaaaaaattcacgccggcaaaagaaaagaaaaaaaaaaccttcgccgtcgtttgcttagtcttcttcgctctat  25131000                                                        --------->DAG2                <---------AHL20(2)                                                 ------->TEIL                        --------->AHL20(2)                                              --------->ANAC58                    <------ZmHOX2a(1)                                           <---------SPL7                         ===================                                         --------->ANAC46                         ===================         <------ZmHOX2a(2)--------->At4g35610 --------->ANAC58                 <---------LBD16    <<<<<<<<<TAC1         <---------At4g35610<-------TEIL                  <----------DOF2     ------  --------->ZAT6         <XXXXXXXXXXXXXXXXXXXXMIR319A/B---------->DOF2    <---------DAG2  -----------  <---------ALFIN1      <---------ZAT18  <---------TOE1(2)             <---------CCA1(2)  --------->YAB1   cccaacactcgatcaaataatcccagtgagcttcttccattccaaggtacgaatcgataaagtcatcaaacctataccttttcaggatttaatggtaatt  25131100      ------>ZmHOX2a(2)    --------->ARR11(3)                                <------MYB83    --------->ARR14(2)                               --------->MYB59    <---------AGP1                            ----------------->AGL1                           <-----    <---------ARR11(3)                        --------->TOE2(3)                                ------    <-----------ARR10                      <<<<<<<ZML2<------MYB46(1)  <---------ATHB12       <------    <---------ARR14(2)                  <---------HSFC1(1)<---------HSFB2a(2)                 -------   <------ZmHOX2a(1)                    --------->HSFC1(1)--------->HSFB2a(2)         ------>NtERF2 ============HOX2a_HOX2a                <---------HSFB2a(2)   <---------KAN4(2)    <---------ANAC58 ===========HOX2a_HOX2a                 --------->HSFB2a(2)<------NtERF2           <---------ANAC58 --->ICU4                              ------>ZmHOX2a(2) <---------LBD16       <---------GLK1(1) >GT1<------ZmHOX2a(2)               --------->ARR11(3)  --------->ETT(1)    --------->ATHB12 <------   agtcaggatctaaatcgtttcttcgaatttgatttcggtgatctagaaccctaatttggtcgggaattttcaaatcaattgatttccctgccctaattta  25131200      <---------WOX13(1)                                                                  <-------TEIL    --------->ATHB12                                                                      --------->ZAT18   --------->ICU4                                                                      <---------ANAC58   <---------YAB1     <---------YAB1                                             <-----------GT1 ----AHL20(2)         <---------ATHB12                                      --------->AHL20(1) --->AHL20(2)     <---------ANAC58                                          <---------ARR11(3) ---AHL20(1)      <---------ANAC58                    ---------->DOF2       --------->ARR11(3) -->AHL20(2)  <---------MYB52(1)              --------->ANAC58              <---------AHL20(1)  <---- ---AHL20(2)<---------YAB1                    --------->ANAC58     --------->ATHB12    <---------ANAC58   atttgatgattgttctgtttgcctatgaataagtttgatttcaatggcaaacaaaaaaaagagagacattgatttgaatatttttacttaggtgcattga  25131300                 <---------ANAC58                 --------->ALFIN1         <---------ZAT6                                        <------ZmHOX2a(1)     <---------ARR14(2)                                      --------->ANAC58               ---------     --------->ARR14(2)                               --------->At4g35610                   ---------     <---------GLK1(2)    --------->YAB1              <---------At4g35610                 ---------->DOF2 <---------At4g35610<-----------HVH21     <---------TOE2(2)  --------->ANAC58       <---------AHL20(2) -----GLK1(2)    <---------ANAC58         <---------TOE1(2)  <---------TOE2(3)<----------DOF2  ------   ttctgcagattgtgttaatgtgtgtcactcttaatcttctgtcttatgtttttctcagttgataaggaatttgaagaagcctttgtttaatggaaagcaa  25131400  Previous    Next  AGI:  At1g67160.1    Description:  F-box family protein. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G03730.1); similar to At3g03730-like protein [Arabidopsis lyrata] (GB:ABY60296.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174) Range:  from: 25128482    to: 25130761    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g67170.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49261.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65241.1); contains InterPro domain Prefoldin (InterPro:IPR009053) Range:  from: 25130909    to: 25133120    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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