Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->AHL20(2)               <---------AHL20(2)                     >>>>>>>>>MYB98               <---------ARR11(3)                   <-----------GT1               --------->ARR11(3)             <---------AHL20(2)               <---------AHL20(1)            <---------AHL20(1)               --------->AHL20(1)            --------->AHL20(2)              --------->AHL20(2)         <---------YAB1       ------->TEIL   <----------ID1 -----DAG2--------->AHL20(2)<----------DOF2  <---------AHL20(2)       ----------->GT1               < ------DOF2 --------->AHL20(2)     <---------AHL20(2)<-----------GT1---------->DOF2    --------->TOE1(2)   ttttgcccaaaaaaaaatatattaagaagacttttgttttattctaatttttttttaacatatgtagctataaagaaaaactacaaaaacttgggaaact  25125700                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)                                                                                    <---------AHL20(1)                                                                                    <---------AHL20(2)                                                                                    --------->AHL20(2)                                                                                 <---------ICU4                                                                                --------->ICU4                                                                                <---------YAB1                                                                              --------->YAB1                                                                              <---------ICU4                                                                             <---------ATHB12                                                                           --------->WOX13(1)                                                                      --------->AHL20(1)                                                                      <---------AHL20(2)                                                       <-----------GT1--------->AHL20(2)                                            --------->YAB1<----------DOF2  --------->YAB1 --------->AHL20(2)                         <---------YAB1   --------->GLK1(2)       <---------AHL20(2)--------->AHL20(1)           <------ZmHOX2a(1)  <---------AHL20(2)  <---------AHL20(1)  <---------AHL20(1) --------->AHL20(2) ---------AHL20(2)   ------->TEIL     --------->YAB1   <---------AHL20(2)<---------YAB1  <---------AHL20(2)   atataaacttataggattgaatgaattttcatttattcgatgagaatcatagtatattttctttctgtttattttattaatcataatttatttaaaatag  25125800                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                              ------->TEIL                                                                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                            <---------ZAT18                                                                            ------->GAMYB                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                      <---------TOE2(3)             <---------WOX13(1)                                     ---------->DOF2               <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                   <---------YAB1                 --------->ATHB12                                 -------->ATHB1                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                 --------->YAB1                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                 <---------ICU4                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                 -------->HAHB4                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                 <---------AHL20(2)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                 <--------HAHB4               xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                 --------->ATHB51           <---------ZAT6 --------->ANAC58        --                                <---------YAB1            ----------->GT1  --------->ANAC58        <-                                <---------ATHB51     <---------AHL20(2)    --------->ANAC46  --------                                --------->ICU4       --------->AHL20(2) <xxxxxxxxxxxxxxxxsmallRNA(i)                              --------->YAB1        --------->AHL20(2)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                              <---------ICU4        <---------AHL20(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                             <---------AHL20(2)     --------->AHL20(1) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                             --------->AHL20(2)     <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                         <---------YAB1            --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   tttgacatgaagtaaacttatgagattactattaattattaaagttttttaaaattaatttagtgaaacgattgacaacgcaccctcttatgcaagtata  25125900                                   <---------ZAT18             <---------AHL20(2)    <---------ZAT14             --------->AHL20(2)    --------->ZAT18  <---------AHL20(2)         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)  <---------YAB1           <---------YAB1 --------->AHL20(2)      --------->AHL20(2) xxxsmallRNA(l2)     <---------AHL20(2)                     <-----------GT1 xxsmallRNA(i2)--------->AHL20(2)  --------->ZAT14     <---------AHL20(2) ------->AHL20(1)    --------->AHL20(2)               <---------YAB1 --------AHL20(1)   --------->AHL20(2)              <---------ICU4                            ------- ->YAB1 >>>>>>>>>GATA-1  --------->YAB1            --------->ICU4                   <---------AHL20(2)   atatataatagataaaaaaatataaaattataaatagcgcactctcttgtgtaatttttatttttctaatcccaaattgccattttttaattcgaaattc  25126000               <---------ALFIN1             --------->CCA1(2)         --------->AHL20(2)             <------ZmHOX2a(2)        <---------AHL20(2)             ================HOX2a_HOX2a            <---------ARR14(2)        --------->AHL20(2)            --------->ARR14(2)        <---------AHL20(1)            --------->AGP1------------>CBF                                                <---------CCA1(2)            --------->ARR11(3)       --------->ICU4                                      --------->LBD16 <----------DOF2      ------>ZmHOX2a(1)<---------AHL20(2)                               <---------ANAC55(2) -->GLK1(2)--------->At4g35610  ----------->GT1  ---------->DOF2 ------>ZmHOX2a(1)      --------->ANAC55(2)   tctctttgttatcagatccacatccttctccaatttgtaatttttttaaaaaaaagacttaaaaatcctacttccatagctcatttacatccgtatcaca  25126100             ------>ZmHOX2a(1)                       <----------DOF2            --------->TOE2(3)                <----------ID1            --------->TOE1(3)           --------->YAB1                           <---------MYB52(1)  <---------ANAC58       <---------ANAC46  ---------->DOF2          <----------DOF2            <-----  <---------ANAC58    *TSS   <---------CCA1(2)     ------->TEIL  <---------ARR11(3)     <----------DOF2   gtaagcttgtgtttccttaattttgtgtcttaaatctcataagcataaagacgaacttttacaacaatttcttttttttcttcggtatctctttgatttt  25126200                                                                                                 <---                                                                                                 ----                                                                                               <-----                                                                                               ------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                        <---------ZAT2                                                                                        <-------GAMYB        --------->ATHB51                                    <---------ARR11(3)          --------->ZAT2        -------->ATHB1                                ------>ZmHOX2a(2)                 <---------At4g35610        --------->ATHB12            --------->ANAC46 --------->GLK1(1)                  --------->At4g35610       <---------YAB1     ---------->DOF2            <------ZmHOX2a(2)             --------->ANAC46  <-----------GT1----------->GT1    --------->ANAC58--------->ARR11(3)             --------->ANAC58 ----AHL20(2)<---------TOE2(3)      --------->ANAC58<---------ARR11(3)             --------->ANAC58   tttttaactattattgatgttgaaaatataaagctcataagcaattggagatgggatctcaagacccttgtatatacagagtgccaagccagttgcgtga  25126300     <---------HSFB2a(2)     --------->HSFB2a(2)  --------->ARR14(2)  <---------ARR14(2)               --------->At4g35610                                  <---------At4g35610 ------ANAC46                      <---------At4g35610                                 --------->ANAC58 ------->GT1                <---------ANAC58                                           --------->ANAC58 ----ZAT14                  <---------ANAC58                                          <-------TEIL --->REM1(2)               <---------HSFB2a(1)                               --------->ARR14(2) -ANAC58                   <---------HSFC1(2)                        <-------TEIL    --------->CCA1(2) >ANAC55(2)                --------->HSFB2a(1)                --------->TOE2(3)     <---------SPL7 -ANAC55(1)           --------->TOE2(1)                 --------->ANAC58     <---------ARR14(2)   <-- -ANAC58              --------->TOE1(1)                 --------->ANAC58  --------->ANAC55(2)     --- -ANAC46<---------GLK1(2)  --------->HSFC1(2)           --------->ANAC46 <---------LBD16--------->At4g35610 -ANAC55(2)          <---------LBD16             <---------ICU4 ---------->DOF2   <---------TOE2(3)   agtgaatccagaagcttatagacctcggatgcttctcatcggccctcttactcattccaagaaacctaaagttcatacggattcaaggtacgcagacata  25126400                                                                                                   --                                                                                                  ---                             <---------AHL20(2)                                                 -----                            <---------AHL20(1)                                                  -----         <----------DOF2    --------->AHL20(2)   --------->YAB1                              --------   --------->SPL7           <---------AHL20(2)   <---------ICU4 <---------AHL20(2)      <---------AHL20(2) -------ANAC46  <---------ANAC46              --------->YAB1 --------->TOE2(3) ------->TEIL --------- -------->RAV1(2)    --------->YAB1          <---------AHL20(2) --------->AHL20(2)<---------AHL20(2)-   gcctggacgacctttgtagcctataatcaatttttttttttttgcatataatcatcttcttaacatttatttcatacaacgtatttttttttaatcgtaa  25126500 ---------------------->ANAC81 ------->DOF2 ---->ANAC58                                         <----------DOF2                --------->GLK1(2) ---->ANAC58                                   <-----------GT1                   --------->ICU4 ->TOE1(2)                   <---------TOE2(3) <---------At5g28300          ----------->GT1 >YAB1---------->DOF2<----------DOF2          <-----------GT1              --------->DAG2           < ---------->GT1   <------ZmHOX2a(1)  <---------At4g35610                  ---------->DOF2     <------   gaaagaaaaaaagaagaagaggacttttgttaagtttttggctgagttttaccctctttgttttgttagcaaaaaaaaaagtaaaaattctgcaatatac  25126600  Previous    Next  AGI:  At1g67150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G65985.1); similar to At1g67150-like protein [Arabidopsis lyrata] (GB:ABY59108.1); contains InterPro domain Protein of unknown function DUF247, plant (InterPro:IPR004158) Range:  from: 25126122    to: 25128358    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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