Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          ------->GAMYB                                                                                       --------->MYB46(3)                                                                                      -------->P                                                                                     ----------->RAV1(1)                                                                                    --------->MYB46(3)                                                                                   --------->At4g35610                                                                                ------>ZmHOX2a(1)                                                                            --------->ARR14(2)                                                                ----------->HVH21  <---------At4g35610                <---------ZAT18                                <---------MYB59 --------->TOE2(3)              --------->At4g35610                             ----------->RAV1(2) --------->ANAC46              <---------At4g35610                            -------->P     <---------ARR14(2)  <----    <----------DOF2    <---------At4g35610             <---------ARR11(3)  <---------GLK1(1)   <-----   cttctgctttggccttagcagactcagcaactcttctactctctctgtagataccaagttctctacctgacttatgcaaatcctcagcaaccgaagactg  24939400                                            <---------ICU4                                            --------->YAB1                                           <---------YAB1                                         <---------ICU4                                         --------->YAB1                                        <---------YAB1                                      --------->YAB1                                      <---------ICU4                                     <---------YAB1                                   <---------ICU4                                   --------->YAB1                                <---------ICU4                                         --------->TOE2(3)                               <---------ATHB12                                  --------->YAB1                            --------->AHL20(2)                                   <---------ICU4                            <---------AHL20(2)                                 <---------ARR11(3) <----------ID1            --------->AHL20(2)                          --------->ARR11(3)       ----- ---GAMYB           <----------ID1<---------YAB1    ------>MYB83       <---------ARR11(3)       ----- ----ZAT6     --------->AHL20(2)--------->YAB1      ------>MYB46(1)  <---------TOE2(3) <----------DOF2   ttaacaacaaaactcataaattagaacaaataaatcatcatcatcatcatcacctacagaaaaattgccttaagatttcaaaatcataactttagcaata  24939500                                                                       --------->ANAC46                                  --------->ATHB12                  <---------ZAT18        <----------DOF2--------->ANAC46                             --------->ZAT18         --------- ---->AHL20(2)      <---------ZAT18         --------->YAB1 --------->ANAC58             <---------AtLEC2 ---->YAB1          --------->ZAT18     <---------AtLEC2   --------->ANAC58       --------->ATHB12   aaaatcgaaactttagcaattgtacacaaaattgcatcatttgcattaaaaattgaaacttaagcaattgtacacaaaattgcatcatttgcattaaaaa  24939600                                                                            <----------DOF2                                                                           ------>ZmHOX2a(2)                                                                         --------->ARR11(3)                                                                         <---------ARR11(3)                                                                     --------->CCA1(2)        -------                                                                    --------->ARR11(1)   --------->TOE2(3)                                                              ----------->HVH21  <---------ARR14(2)               <-----------GT1                   <-----------GT1    <---------ARR11(3)   --------->TOE1(3)    <----------DOF2                    ---------->DOF2      <---------At4g35610  <---------GLK1(2) >YAB1       --------->AHL20(2)      <---------YAB1         --------->At4g35610  --------->ARR14(2)   tcgaaactttagcaatataacaacattctttgcacaaatatgaaagaaatttcacatttttcatctgaaagatttgatctttggattctcaccttaatga  24939700                                    <---------ANAC58                                    <---------ANAC58                                    <---------ANAC46                 --------------->AtSPL3                 --------------->AtSPL8          <---------DAG2           <------NtERF2      ---------->ID1             <---------RAP2.6(2)                         --------->YAB1      <---------CCA1(2)    <---------AHL20(2)                           --------->MYB46(3)  <---------ANAC46     --------->ICU4<----------DOF2               <-----------HVH21 ---->TGA1<----------DOF2 <---------YAB1                          <----------DOF2      ------>ZmHOX2a(1)   cgcttcttgtagctttttgtccgtacttattaatggtggctttcactgatacagttccatctaaattcctttcacccattgatcagttcctactaagttt  24939800                                        <------MYB46(1)                                        <------MYB83                         <-----------RAV1(2)                                    --------->ARR14(2)                    ----------->HVH21                                    <---------ARR14(2)                   <---------MYB59                               <------------CBF                 ---------->DOF2<---------At4g35610                              --------->ATHB12     --------->MYB52(1)  <---------ARR11(3)     ------------>CBF        <---------YAB1       ---------->DOF2      --------->ARR11(3)   ctactgaaacaataaacaaatattctagttcaagattggatttggtgatgaacaaagggaatttttgaaaggagaccttacaggtgagtgagaagttgga  24939900                                                                 <---------O2                                                                 --------->ANAC46                                                                 ====================================                                                           <------MYB46(1)                                                           <------MYB83                                                           <---------MYB46(3)                                                         <---------WOX13(1)                                                        <------------CBF                                                      --------->ICU4               <-------GAMYB                          <---------YAB1              --------->ALFIN1--------->ANAC58      --------->YAB1              <-----------RAV1(1)     <------ZmHOX2a(1)--------->ATHB12            <---------ANAC46  --------->ANAC46     --------->ICU4--------->O2            <---------ANAC58  --------->ANAC58     <---------YAB1<---------TGA1a                   <-            <---------ANAC58--------->MYB52(1)  --------->ICU4   --------->TGA1a     --------->YAB1<-      --------->DAG2     <---------KAN4(2)  <------ZmHOX2a(1)  <---------DOF5.7(2)  <---------YAB1 <-   tgaagagaaaggttgtgtgttgcagagaataaacggaagaggagaaggagatgatgatgattggttcacgtcgtctctgttttcttatcattttgtttct  24940000                                                                      <---------------AGL15                                                                      --------------->AGL15      --------->DAG2                                              <---------ARR14(2)     ---------->DOF2          <----------DOF2                     --------->ARR14(2) ===============bZIP_DOF   ------->TEIL              <---------At4g35610 --------ANAC58         <---------YAB1               ----------->RAV1(2)       --------->YAB1 --------ANAC58      <---------AHL20(2)           <---------AHL20(2)  =============================== --------ANAC46    --------->GLK1(2)    <---------At4g35610------>NtERF2  --------->ANAC46 ----------   gtcttggaaaagtttagagagaatttatgaaacttttgtttcttctgagcattttatctgaggccaaggataccacaagtagcataaacatatatgacat  24940100                                                                                                   <-                                                             ----------------->AG        <---------MYB52(1)      <---------TGA1a                                      <-----------GT1       <---------ANAC55(2)   ----------->HVH21                 <-------TEIL   --------->YAB1               --------->ANAC55(2) ==============================================================================MADS_MADS------>ZmHOX2a(1) ->HVH21 <-----------HVH21   <---------ICU4    <---------TOE2(3)       --------->YAB1   <----------DOF2   attgtctgacctgtgagactatcccaactaattttcacatacactaattgagaatgagaattatccaaataagtcataagattacatgtcctttagttta  24940200           <----------DOF2       <------MYB46(1)       <------MYB83      --------->MYB59      <---------AtMYB61                                     <-------TEIL                      <------ ----------RAV1(1)            --------->WOX13(1)     ------->TEIL      <---------ATHB12<---------TOE2(3)   tgtgttgtttggtcttttgttttagatggtagcaatccaactagaagacagaatgaaactggttcatcacccattcaatatttgtgatttaggctacttt  24940300  Previous    Next  AGI:  At1g66840.1    Description:  Identical to Protein PLASTID MOVEMENT IMPAIRED 2 (PMI2) [Arabidopsis Thaliana] (GB:Q9C9N6); similar to PMI15 (plastid movement impaired 15) [Arabidopsis thaliana] (TAIR:AT5G38150.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79831.1); contains InterPro domain Protein of unknown function DUF827, plant (InterPro:IPR008545) Range:  from: 24937661    to: 24939779    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version