Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                               ------                 <---------AHL20(2)              <---------AHL20(2)                            <-----                 --------->AHL20(1)              --------->AHL20(2)                            ------                 --------->AHL20(2)             --------->AHL20(2)                            <------                 <---------AHL20(1)             <---------AHL20(2)                            -------          --------->TOE2(3)                     --------->AHL20(1)                       ------->GAMYB          --------->YAB1                 <-----------GT1     --------->YAB1              --------->YAB1    <-----------GT1                     <---------YAB1      <---------ATHB51             --------->TOE2(3) <---------ICU4 --------->AHL20(2)    <---------ICU4        <---------ATHB12            --------->MYB46(3) -------->AHL20(1)                    <--------HAHB4     --------------->AGL15         ------>MYB46(1) ---------AHL20(1)             ---------->DOF2  <---------AHL20(1)                     -------->P ------->YAB1   <---------AHL20(2)   <---------YAB1   <-----------GT1                  ------>MYB83<-   aaaatattacattcttaattaaatttttagtctaaaagtattattactaatttatttttccaattataccaaaacaaaattgtatttccaaccaaaataa  24912500                                                                              <-------TEIL                   <---------AHL20(2)                                      --------->ZAT2                   --------->AHL20(2)                                      --------->At4g35610 ----AHL20(1)     --------->AHL20(2)                               --------->ARR14(2) --->AHL20(1) --------->AHL20(2)                                   <---------ARR14(2) ----AHL20(2)--------->AHL20(2)                                   <---------At4g35610 --->AHL20(2)--------->AHL20(1)       <----------DOF2             --------->At4g35610               - ---AHL20(2) <---------AHL20(2)     <-------TEIL               <---------MYB52(1)          <<<<<<<<<GATA-1 -->AHL20(2) <---------AHL20(1) --------->MYB59               <-----------HVH21       <----------DOF2 ----------GT1<---------AHL20(2)<---------TOE2(3)    <---------MYB52(1)  <---------ALFIN1 <----------   attacaaattacaaataaaattaaaatttctatttaggttctttctgaaatttccattagtttctgtcagttccaccagcttcattctcttttatctatt  24912600                                     <---------DOF5.7(2)                --------->TOE2(3)   <---------WRKY12             <---------DOF5.7(2)    <---------WRKY45                               --------->ANAC46            <---------WRKY38(1)     <---------WRKY38(1)                           ------>MYB83            <---------WRKY12 --------->ARR11(3)                                   ------>MYB46(1)            <---------WRKY45 <---------ARR11(3)                                 <---------MYB59    ------->GAMYB            --------->GLK1(2)                                  <---------MYB111(1)   <---------MYB52(2)       --------->RVE1(1)                                   <---------MYB46(2) -------->MYB46(3)        --------->AHL20(2)      <-----------GT1      <---------CCA1(2) <----------DOF2 -GT1      --------->WRKY18(1)     --------->WRKY18(1)   ------>ZmHOX2a(1)--------->ZAT6 ============   caacaactaactagtcaacgtttaaaaaaaaaatctagtcaacgttttgtattaacttcctcgacaagttcccataactctacctactcaacttttatgg  24912700            <-----------TGA1           --------->ANAC46   --------->ANAC58   <---------O2   --------->bZIP60(2)                 <---------WRKY12   --------->O2<------------CBF       --------->WRKY18(1)   --------->ANAC58                  <-----------HVH21                                           ----   --------->TGA1a             <-----------GT1     <-----------GT1                              <----   --------->ANAC46      <---------AHL20(2)   <---------CCA1(2)                       <----------DOF2 <---------ALFIN1    <---------AHL20(2)<---------WRKY45                            --------->ARR11(3) ============bZIP_DOF--------->AHL20(2)<---------WRKY38(1)  <---------AHL20(2)     <---------ARR11(3)   agaccacgtcttcgcgtcattgtttaattcatttcacaaggtcaacgcatatatttccctattttttagtctaattcaacgaagagttctttatcgttcc  24912800                                                                                                   --                                 --------->ATHB12                                              ------                            <---------YAB1                                                     ------                           --------->TOE2(3)                                                   <-----                           --------->YAB1                                                   <--------                      ------------>CBF                                                      <------MYB83                      <---------ATHB12                                                      <--------                  <-------TEIL<------------CBF                                              <------MYB46(1)                  ------>ZmHOX2a(2)                                                        <---------DEAR3(1)                 <------ZmHOX2a(2)                                                         <---------TOE1(2) ----->LBD16    --------->ARR14(2)                                   ------------>CBF      <---------AtMYB61 -----HSFB2a(2) <---------ARR14(2)<------------CBF                  <<<<<<<<<<<<<<<<<LFY  <---------MYB52(1)   ccaagtttttttcatttggatccattcaatcttattgattgtagcgcttctctaaaaacagttttgatcaagacaatggaaaatggtttctcgttggtgc  24912900                                                           <---------AHL20(2) -------->DOF2                                            --------->ICU4 --->ZAT18                                   --------->ARR11(3)       ------->GAMYB >NtERF2<------ZmHOX2a(1)           --------->GLK1(1)     <---------YAB1   --------->ICU4         --- ----ZAT18            <---------YAB1<---------GLK1(1)----------->GT1--------->At4g35610      <-------TEIL -MYB46(3)     >>>>>>>>>TBF1    --------->YAB1<------ZmHOX2a(2)     <---------At4g35610   <---------At4g35610 -DEAR3(2)  >>>>>>>>>TBF1 --------->YAB1     <---------ARR11(3)   --------->ETT(2)        --------->At4g35610   ccaaagaagaggaagaagaagaagattatagtaatgagaaatctgaagatcagacgagttattatttgtcaacagagatgatgaagaaggtaagcttcat  24913000               <-----------RAV1(1)             <------NtERF2                                           <---------ANAC46            <---------MYB46(3)                                       <---------O2           <---------RAP2.6(2)                                   <-----------HVH21        <---------ATHB12                                        <------MYB46(1)   ----------->RAV1(1)                                          <------MYB83 --------->At4g35610  <---------At4g35610                      <---------MYB46(3) <---------ZAT14    <---------RAP2.6(2)                       <---------ANAC58 --------->ZAT18  <---------MYB46(3)                          <---------ANAC58               <------- <------NtERF2 <---------MYB46(3)                             <---------ANAC46             <---------At4g35610 ------>RAP2.6(3)--------->ALFIN1     ------>ZmHOX2a(1) <---------YAB1          <----------DOF2<-----   ggctgcaccaatggtggctgtggctgcttctcaatacctccttcaagttatctccattgttatggctggtcacttggacgagctttctctctcagccgtt  24913100                                                                  ------>ZmHOX2a(1)                                                                 <---------ALFIN1                                                               ------>ZmHOX2a(1)                                                              <---------ALFIN1                                                            ------>ZmHOX2a(1)                                                         ------>ZmHOX2a(1)                                                        <---------ALFIN1                                                      ------>ZmHOX2a(1)                          --------->DEAR3(1)         <xxxxxxxxxxxxxxxxsmallRNA(se3)                         <---------LBD16             <---------ALFIN1       --------->O2      <---------At4g35610       ------>ZmHOX2a(1) ------>ZmHOX2a(1)             <- --MYB46(3)            <-----------GT1    --------->TOE2(3)<---------ALFIN1                       <-- ----MYB52(1)        <-----------HVH21   ----------->GT1<xxxxxxxxxxxxxxxxsmallRNA(se3)         ------   gctattgccacttctcttaccaatgtcaccggcttcagcctcatcgtaaattcctcctcctcctcctcctccttctctctcgacttatagacctgtccaa  24913200                                                     --------->TOE2(3)                                                --------->AHL20(2)                                                <---------AHL20(2)                                          <---------AHL20(2)                            <----------DOF2                                         <---------AHL20(2)          --------------->AGL15                  <---------AHL20(2) <---------AHL20(2)              <---------DAG2  <---------ARR11(3) -----ZmHOX2a(1)  --------->AHL20(2)<---------AHL20(2)<---------AHL20(2)             --------->ARR11(3) --------ID1--------->ANAC58        --------->AHL20(2)<---------YAB1 <---------------AGL15   <------ZmHOX2a(1) ---->DOF2  --------->ANAC58  <------NtERF2 <---------YAB1           <----------DOF2<---------CCA1(2)   aggacaaacatgctaagcaaaaaattagggtcgccaaattttttttatttttaaatattaatgcaacttcactttttttagtagttatatctttaggact  24913300                                                          <---------ANAC58                        <--                                                <---------ZAT18                                 -----                                                <---------ZAT14                                 -----                                        ----------------------->TaNAC69(2)                    <------                                       --------->CCA1(2)  <---------ANAC58                    -------                                  ---------->DOF2 <---------ZAT14                     --------->ATHB12                             <----------DOF2    --------->ZAT18                      <---------AHL20(2)            <---------YAB1  <---------DAG2      --------->ZAT14  --------->YAB1      <---------YAB1   <---------AHL20(2)    --------->REM1(1)    <---------------AtSPL8                <---------AHL20(2)   --------->AHL20(2)    <---------ALFIN1     --------------->AtSPL8      <------ZmHOX2a(1)  --------   accaattttttgttttgatagaaacttacaccttttcaaagttatgggagtgtacacatttcttgtttcataactaggaccactatttttattggaccga  24913400  Previous    Next  AGI:  At1g66780.1    Description:  MATE efflux family protein. similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G64820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42224.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 24912876    to: 24915148    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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