Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          ------>ZmHOX2a(2)                                       <------ZmHOX2a(2)                                      --------->ARR11(3)         ------->TEIL                 <---------ARR11(3)                                            -      --------->ANAC55(2)             --------->ARR14(2)                                            <    --------->MYB52(1)                <---------ARR14(2)                                            -   ----------->HVH21                ----------->ARR10                                               -  <---------MYB46(2)       ---------->DOF2                                                 <---------At4g35610  <---------MYB52(2)     --------->TOE2(3)                        --------->ZAT6           --------->At4g35610 ----->GAMYB          ----------->RAV1(1) --------->LBD16    --------->TOE2(3)   --------->ANAC46   -   agcgcctaacgtattttagaacatcaacataaaaccctaagatccccaatttctcaatctaatccataactctatacaattctcccccattgtagcagaa  24872300                                                               ----------->HVH21                                                               ----------->TGA1                                                             <---------ANAC58                                                             <---------ANAC46                                                             <---------ANAC58                                                          <---------DEAR3(1)                                                         <---------At4g35610                                                         <------NtERF2                                                         --------->At4g35610                                    ------>NtERF2        --------->ATERF1(1)                                   <---------ZAT18    --------->ATERF1(1)                                   <---------SPL7     <------NtERF2                                   --------->ZAT18   --------->RAP2.6(2)                                 <---------At4g35610 <---------RAP2.3(1)                                 --------->At4g35610 ------>NtERF2                                --------->MYB52(1)   <---------ATERF1(1)                        --------->ANAC55(2)         <---------DEAR3(1)                        <---------ANAC55(2)         --------->ATERF1(2)                        --------->ANAC58            <---------ATERF1(2) -------->ANAC58        --------->ANAC46           --------->At4g35610   ------>ZmHOX2a(2) ---------ANAC55(2)     --------->ANAC58          <---------ATERF1(1)--------->WRKY12 -------->ANAC55(2)     --------->ANAC55(1)      ---------->CDC5  <---------bZIP60(2)  <---------ANAC58 -------->ANAC58       <---------LBD16           <---------DEAR3(1)  --------->WRKY38(1)            < -------->ANAC46    --------->CCA1(2)--------->SPL7<------NtERF2  <---------ANAC46     <---------ANAC58   atacgaaacctgtaatcggaagagacacggaagttagcggacgagagagcctcggcggcatcggcgtgacgttgatcgtcatcgagagtgcttccatact  24872400                                                                                       --------->ARR14(2)                                                                                       <---------ARR14(2)                                                                                      --------->ATERF1(1)                                                                                      <------NtERF2                                                                                     ------>NtERF2                                                                                     <---------ERF1                                                                                     <---------RRTF1(1)                                                                                     <---------RAP2.3(1)                                                                                     <---------ATERF1(1)                                                                                     <---------DEAR3(2)                                                                                    <---------DEAR3(1)                                                                                    <---------RAP2.6(2)                                                                                    <---------RAP2.3(2)                                                                                    --------->DEAR3(1)                                                                                    <---------RAP2.3(3)                                                                                   <---------At4g35610                                                                                   <---------DREB2C(1)                                                                                   --------->DREB2C(1)                                                                                   --------->RAP2.3(1)                                                                                   <------NtERF2                                                                                   --------->DEAR4(2)                                                                                   --------->ATERF1(1)                                                                                  <---------RRTF1(1)                                                                                  <---------ATERF1(1)                                                                                  <---------ORA47(2)                                                                                  <---------RAP2.6(1)                                                                                  ------>NtERF2                                                                                  <---------ERF1                                                                                  <---------DEAR4(2)                                                                                  <---------RAP2.3(1)                                                                                 --------->ALFIN1                                                                                 <---------RAP2.3(3)                                                                                 <---------RRTF1(2)                                                                                 <---------RRTF1(3)                                                                                 <---------RAP2.6(2)                                                                                 <---------RAP2.3(2)                                                                                 --------->DEAR3(1)                                                                                 <---------DEAR3(1)                                                                                 --------->ATERF1(2)                       --------->LBD16                                           <---------ANAC46                       <------NtERF2                                            ------>NtERF2                       ------>NtERF2                                            <---------ABI4(1)                      --------->RAP2.6(2)                                       <------NtERF2                      --------->DEAR3(1)                                        --------->ATERF1(1)                    ------>NtERF2                                               --------->RAP2.3(1)                    --------->LBD16                                            <---------ATERF1(1)                <---------ARR14(2)                                             <---------RAP2.3(1)                --------->GLK1(2)                                            --------->LBD16                ------->TEIL                  --------->ANAC58               <---------LBD16             --------->ANAC58                 --------->ANAC58              --------->DEAR3(1)             --------->ANAC58            --------->At4g35610              <---------At5g28300<-------             --------->ANAC46            <---------At4g35610           <-----------HVH21     <-------       ------>ZmHOX2a(2)             <-----------HVH21              <-------GAMYB<---------ATERF1(2)   <---------YAB1  --------->ANAC46 --------->YAB1           <---------MYB46(3)------>NtERF2 <------- ----------DOF2 --------->ARR14(2)  ------>ZmHOX2a(2)       <---------MYB52(1)<---------DEAR3(1)  <--   cacttttgatcgaccacgaatccgccgcgatagatcgatcgtcatcggaagccaaactatccgttgttgtcgttgtcaccgcggcggcggctctggcttg  24872500                           <--------P                          <---------MYB52(1)                         --------->LBD16               <-------TEIL                        <---------HSFB2a(2)          <---------ARR14(2)                        --------->HSFB2a(2)          --------->ARR14(2)                   <-------TEIL--------->WOX13(1)  <---------TOE2(2)               <---------ARR14(2)                  <---------ARR11(3)         --------->DEAR3(1)                --------->SPL7                  <---------ARR14(2)       ------>NtERF2                       --------->ZAT14                  --------->ARR14(2)       --------->LBD16    ----------->RAV1(1)  --------->ARR14(2)     <------ZmHOX2a(1) <---------LBD16    --------->ANAC58  ------->GAMYB<-----------GT1 --ANAC46      <---------TOE2(2)          --------->ANAC58 --------->ANAC46  <---------SPL7 --ANAC58      <---------TOE1(2)          --------->ANAC46 --------->ANAC58--------->ZAT6 --ANAC58     <-----------RAV1(2)        <---------LBD16   --------->ANAC58<---------------AtSPL3 --- -------MYB46(3) <---------GLK1(2) <---------YAB1  <---------TOE1(2)  <---------KAN4(2)<----------DOF2   ttgttgaggagtcgtctcaggttcttccggtagcaatctgattcccgccatcgcagattcaacgccacagagaataaacagtacggttcctttttttttt  24872600                                                                      --------->ARR14(2)                                                                      <-----------ARR10                                                                      <---------ARR14(2)           --------->ZAT2                                             --------->ARR11(3)           <---------ZAT2                                 <-----------TBP           <---------At4g35610                         *TSS      <-----------GT1           --------->At4g35610             <-----------HVH21<-----------TBP          <---------ICU4      <---------------------WRI1           ------>ZmHOX2a(1)--------->AHL20(2)     <----------DOF2 --------->ANAC46                         --------->TOE1(3) <---------AHL20(2)<----------DOF2 -------->HVH21             <---------ALFIN1          ----------->GT1 <---------ARR11(3)   <---------   ttgacgcagtcgaagctgaaaatgaaacccctactcgtgataatccttcacttgtattgtatatatataacaaatcttctcttttctttattactttgag  24872700                                                                                                <----                                                                                               <-----                                                                                              -------                                                                                           <---------YAB1                                             <---------AHL20(1)                    --------->ATHB51                <---------HSFB2a(2)          --------->AHL20(1)                    -------->ATHB1                --------->HSFB2a(2)          --------->ARR11(3)                    <---------AHL20(2)                <---------HSFC1(1)         <---------AHL20(1)                      -------->HAHB4                --------->HSFC1(1)         --------->ARR11(3)                      --------->ATHB12         <---------TOE2(3)        --------->ZAT6    <--------P                     <---------ICU4 ---      <---------YAB1   --------->DAG2      --------->AHL20(1)          <---------YAB1<---------YAB1 -     --------->TOE2(3)---------->DOF2      <---------ARR11(3)     <---------ANAC58--------->ICU4<----   --------->ICU4  <------ZmHOX2a(1)    --------->AHL20(2)        <---------ANAC58<---------ATHB51<-- -DOF2<---------AHL20(2)      <---------AHL20(2) --------->MYB59<-----------GT1   <---------YAB1-----   acataaatattaatgtttctaggaaaaagtattttaacacaaaaaaatattttggtaagttttttttttcttgattatttgttaattattgttatgaatc  24872800                          <---------YAB1                        --------->YAB1                                <---------ANAC58                   --------->AHL20(2)                                 <---------ANAC58     <-----------GT1<---------YAB1                                  <---------YAB1 <---------YAB1   --------->YAB1                                  --------->YAB1 <---------AHL20(2)<---------AHL20(2)        <-----------GT1     <---------YAB1 -----ICU4        --------->AHL20(2)     --------->TOE2(3)---------->DOF2 ----ATHB12   --------->AHL20(2)        --------->ATHB12 <---------WRKY12 >TEIL        <---------AHL20(2)        <---------ICU4   <---------WRKY45 ------>ICU4  <---------YAB1 <---------HSFB2a(2)         <---------WRKY38(1) -------->AHL20(2)<---------AHL20(2)    --------->YAB1  <<<<<<<<<<WRKY40              <---------YAB1 ----HAHB4   <---------AHL20(1)        --------->ICU4   --------->WRKY18(1)     <---------ARR11(3) -------YAB1 --------->AHL20(2)        <---------ATHB12 <<<<<<<<<<WRKY18        --------->ARR11(3) ---->YAB1   --------->AHL20(1) ---------->DOF2         <<<<<<<<<<WRKY62    ---------->DOF2   atttttattacaaaatataattaaaattatactagaaagaaatcattaaactattttggtcaaagttattatacttgcgaaaggtcttatgattttagac  24872900             --------->ETT(2)             <---------ETT(2)           <---------ZAT14           --------->ZAT14                                                                          <      <---------ZAT14                                --------->ANAC58                        --------    <---------ZAT14                   --------->AHL20(2)                                     --------    --------->ZAT14               ---------->DOF2    --------->ANAC58                       ---------   <---------ZAT6             --------->At4g35610--------->ANAC46    ----------->GT1   ---------->DOF2 <---------ANAC46     <---------At4g35610 <-----------GT1        --------->ALFIN1     <---------WRKY45   atttagtgtagactgtagacatttatctgataagctcaaagaaaatactattcgcaagaaaacagaagtgtttgtaaaaaatgtctagtcaaagtaggca  24873000                                   <------ZmHOX2a(2)                          --------->TOE1(3)                          --------->TOE2(3)                         ----------->GT1    <---------AHL20(2)  <---------TOE2(3)                                         --------->DAG2 ----------DOF2        <-----------GT1                                           ---------->DOF2 ->ANAC58        --------->HSFB2a(2)       --------->ANAC46           --------->ANAC55(2) ->ANAC58 <---------At4g35610 <-----------GT1     --------->YAB1      <---------ANAC55(2) >MYB59 <-----------GT1--------->MYB52(1) <-------TEIL   --------->YAB1       --------->YAB1     ----   aactttttatttagctcttatggaataacgttatacgatccatatacatcattcatcaacaatactcgttatacgtataagcataaagtgaagttttatt  24873100                                                                    ---------->DOF2                                                              <------ZmHOX2a(2)                                                     ----------->RAV1(1)      --------->GLK1(2)                                                ---------->DOF2   --------->ANAC46                 <-      <------ZmHOX2a(1)     <----------ID1  <----------ID1   --------->ARR11(3)                   <-- ----->ATHB12        <-----------GT1   ---------->DOF2       <---------ARR11(3)             ---------   catttgtaggatagtggagaatattacaaaacaacaagaagaaaagacgacaaagcaccataagatcgacgaaagaagagaatcaacaatgaaatcatat  24873200  Previous    Next  AGI:  At1g66680.1    Description:  AR401. similar to catalytic [Arabidopsis thaliana] (TAIR:AT3G60910.1); similar to SLL2-S9-protein [Brassica rapa] (GB:BAA77395.1); similar to SLL2 (GB:AAB49423.1); contains InterPro domain Methyltransferase type 12 (InterPro:IPR013217) Range:  from: 24869758    to: 24872655    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version