Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->MYB46(3)                          ---------->DOF2                           --------->ANAC58                              --------->ANAC55(2)                           --------->ANAC46                              <---------ANAC58                           --------->ANAC58                              <---------ANAC55(2)                         --------->MYB46(3)                              --------->ANAC58                    <---------------AGL15                                --------->ANAC55(1)                    <---------HSFB2a(2)                                  --------->ANAC58                    --------------->AGL15      <---------ICU4    --------->YAB1                   ----------------->AG       <---------YAB1     --------->ATHB12                   ----------------->AGL2     --------->ICU4     <---------ICU4                   ----------------->AGL3   --------->YAB1       -------->ATHB1                   ----------------->AGL1  <---------YAB1       <---------YAB1--------->AtLEC2                <---------GLK1(1) --------->MYB52(1)  <------MYB46(1)    <---------ANAC58                --------->GLK1(1)---------->DOF2      <------MYB83  <---------ICU4                 --             <---------TOE1(3)  <---------MYB52(2)   <---------AtMYB61   <---------ANAC55(1)    -----     <---------LBD16--------->HSFB2a(2)<---------GLK1(1)<---------ZAT6   <---------ANAC46       ----- --ZmHOX2a(1)<---------TOE2(3)----------->RAV1(1) <-----------RAV1(1)  <-----------GT1          -----   aacaatttggggattagggtttccataaccagcaacaaagggtttctgataattgttggtgttagaatcattgttacgtaatgcaaaacttgaattagaa  24815900                                                             <-----------GT1                                                            <---------YAB1                                                          --------->YAB1                                                          <---------ICU4                                                         --------->ICU4                                                         <---------YAB1                                                       <---------ICU4                                                       --------->YAB1                                                      <---------YAB1                                                      --------->ICU4       <---------YAB1          --                                                 --------->ANAC46        --------->YAB1           <--          <---------ALFIN1 --------->ATHB12      --------->bZIP60(2)    <---------YAB1           ----  --------->YAB1          <---------YAB1         --------->ANAC58       --------->ICU4           <--- <---------ATHB12  ----------->GT1               --------->ANAC55(1)  --------->YAB1      <---------YAB1 ------->WOX13(1)  --------->YAB1                ----------->GT1      <---------ICU4    <---------ICU4 ---->ANAC58      --------->ICU4                 <---------ANAC55(2) --------->ICU4  ================ ---->ANAC58  --------->LBD16                    --------->ANAC58  --------->YAB1    ================ ---->ANAC46 --------->ANAC46<---------WOX13(1)  --------->ANAC55(2) <---------YAB1  <------ZmHOX2a(1)   gcaatcacatcaacaccgcaattgttatatgattgagaagaaaccctagacacgttattattattactaccatgatgatgatacagaggattatgaccag  24816000                                                --------->MYB52(1)                                               ----------->HVH21                                             --------->ANAC55(2)                                             --------->ANAC58                                             <---------ANAC55(2)                                             <------NtERF2                                             --------->ANAC58                                            ------>NtERF2                                           <---------ANAC46                                          <------NtERF2                                          --------->ATERF1(1)                                         ------>NtERF2                                         <---------RAP2.3(1)                                         <---------ATERF1(1)                                         <---------RRTF1(1)                                         <---------ERF1                                         <---------ORA47(2)                                        --------->ALFIN1                                        <---------RRTF1(2)                                        <---------RAP2.3(3)                                        <---------RRTF1(3)                                        <---------RAP2.3(2)                                        --------->ATERF1(2)                                        --------->DEAR3(1)                                        <---------DEAR3(1)                                    -------                                       <------NtERF2                                         --------                                       --------->ATERF1(1)                                   ------->GAMYB                                       <---------ABI4(1)                                    ---------                                       ------>NtERF2                                        <--------                                      <---------ERF1                                    <-----------HVH21                                      <---------ATERF1(1)                               --------->At5g28300             <---------ANAC58         <---------RRTF1(1)                              <------NtERF2             <---------ANAC46         <---------RAP2.3(1)                            ------>NtERF2             <---------ANAC58        <---------DEAR3(1)                             <xxxxxxxxxxxxxxxxsmallRNA(s)         <-------GAMYB               <---------RAP2.3(2)                            --------->DEAR3(1)        <-----------RAV1(1)          <---------RRTF1(3)                             <---------ALFIN1   --------->GLK1(1)                 <---------RAP2.3(3)                           --------->MYB46(3)  <---------ARR14(2)                 <---------RRTF1(2)                           --------->LBD16  --------->ARR14(2)                 <---------RAP2.6(2)                          ------>NtERF2 ---->ZmHOX2a(2)                    <---------LBD16  --------->ARR14(2)       --------->ARR14(2) ----ZmHOX2a(2)                    <-----------RAV1(1)<-------TEIL            <---------ARR14(2) ----->ARR14(2)         ----------->HVH21<---------RAP2.6(1)            --------->TOE1(2) --------->MYB52(1) ------ARR14(2)        ------>ZmHOX2a(2)<---------ATERF1(2)             --------->TOE2(2) --------->ARR14(2) ====HOX2a_HOX2a      <---------At4g35610<---------DEAR4(2)            --------->MYB46(3) <---------ARR14(2) =====HOX2a_HOX2a     --------->At4g35610<---------DEAR3(2)   ------>ZmHOX2a(1)  --------->ANAC46   atcggaattgctgttgcgcttgtgatctgaaacgtttttgcggcggcgcgtaacggttcgtctcctcttgataacctccgattccgccaccgtaaccgcg  24816100                                                          <-------TEIL                                                          ------>ZmHOX2a(2)                                                         --------->ARR14(1)                                                         <------ZmHOX2a(2)                                                        --------->ARR14(2)                                                        --------->ARR11(3)                                                        <---------ARR11(3)                                              <---------At4g35610                                              --------->At4g35610                                   <---------ANAC58     <---------ARR14(2)                                   <---------ANAC58   ----------->ARR10                                   <---------ANAC46 ---------->DOF2 -->LBD16                    <---------ANAC58 <---------ZAT14                         ----------->RAV1(1) ->ANAC46                    <---------ANAC46 --------->ZAT14                <---------YAB1   <------ >MYB46(3)                   <---------ANAC58 --------->ZAT2   <---------MYB46(3)     --------->MYB52(1) ----AtMYB77              >>>>>>>ZML2         <---------ZAT2 <---------MYB52(1)  --------->AHL20(2)   attgtcgcttcttctcttcatcgttgttctagcgtttgcgtttctctgagcagagaaagatccgtttgatgccatcttcacgattaaacaacagttatga  24816200                                                         <-------GAMYB                                                        <---------ANAC58                                                        <---------ANAC46                                                        <---------ANAC58                                                     <---------WOX13(1)                                                   <---------MYB46(3)                                                <------MYB83                                                <------MYB46(1)                  ---------->DOF2           --------->ARR14(2)             ------>ZmHOX2a(2)   --------->TOE2(3) --------->ATHB12      --------->GLK1(1)          --------->TOE1(3)<---------YAB1   <------ZmHOX2a(1)       ---------- ---YAB1<------ZmHOX2a(2)---------->DOF2    <---------ARR14(2)    ----------->GT1       --------->ATHB12   gttttcagagatcgatcgcagaaagagaaaagaaaccctaaatttggatttggtgattgcgttgagagaggagaattttagaaattgaaacgattgaaaa  24816300                                                                                             ------->MYC2                                                                                             ------->MYC3                                                                                             <-------MYC3                                                                                             <-------MYC2                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                   ==================================                                                                   ---------->DOF2          <--------                                                          <---------MYB46(3)                <--------                                                        =============================================                                                        <-------GAMYB                       <--------                                                       <---------DEAR3(2)                   <--------                           <------MYB46(1)            <---------DREB2C(2)                   <--------                 --------->ANAC58    ----------->TBP  <---------DEAR4(1)                <-----------HVH21               --------->CCA1(2)     --------->AHL20(2)<---------MYB46(3)            <-------GAMYB             *TSS--------->ANAC58--------------->AGL15<---------At1g77200            ================      --------->GLK1(2)    <------MYB83            <-----------RAV1(1)   <---------ANAC46   <--------      --------->ARR14(2)--------->ARR14(2)    --------->TOE2(3)--------->DAG2     <---------ANAC46      <---------ARR14(2)<---------ARR14(2)  <---------TOE2(3) ======================================= ->GT1------->TEIL    ----------->ARR10  <---------AHL20(2)   ---------->DOF2    <---------LBD16   ataaaacgaatctgaagagacgcgaagataggtttctctataaataaacgtttatgtcggttgataaagtaaaccgcgtgaatcgcgcgttgtcacgtgt  24816400 >O2 >ANAC55(2) >TGA1a -TGA1a -ANAC55(1) =bZIP_DOF -bZIP60(2) -ANAC58 =MYC_MYB -ANAC46                                             --------->HSFC1(1) -ANAC58                                             <---------HSFB2a(2) -O2<---------ALFIN1                             <----------DOF2                               <----- =MYC_MYB                                 <------------CBF                                    ------- -ANAC55(2)                         ----------->GT1  --------->HSFB2a(2)            <-----------GT1 *TSS =bZIP_DOF            <---------MYB52(1)<---------AHL20(2)               <---------At4g35610<--------   tttgggccacggtttataggcccagtttgttaatgggcctgttaaattgggccttctggaatctactcgttgttccgctctgtattttgctgttctttat  24816500                                                                                               ------                                            --------->ARR14(2)                                 <-----      --------->ANAC46                      <---------GLK1(2)                  --------->At4g35610 -------CBF                         --------->ANAC58            <---------ANAC58   --------->REM1(1) -->ATHB12                  >>>>>>>>>TBF1   <---------ARR14(2)  <---------ANAC58   <---------ALFIN1 --DOF2           --------->ZAT14   --------->ANAC58   --------->ZAT18         <---------At4g35610   tgaattcgacgctaaattagtgaagacgaagaagaaggaagctatggattctgagaaggcactagagcttgtgaagcatggagctacacttctatttctc  24816600           <<<<<<<<<<<<<<<<<LFY     ------>ZmHOX2a(1)                                                                              <    --------->TOE2(3)             <---------TOE2(2)                                              <--- --->HSFB2a(2)                   <-----------RAV1(2)         <----------DOF2  <----------DOF2    ---- ----HSFB2a(2)      --------->ETT(1)                    ---------->DOF2       <---------DAG2  -------   gatgttcctcaatatacactggtcggaatcgatactcaggtttgtctacttctaagtttaaagcttttatcgaatttcaacttttctcagtttcaaagtt  24816700                                           <---------YAB1                       <---------HSFB2a(2)   <---------DAG2                 <---------ARR14(2)                            --------->HSFB2a(2)   <----------DOF2             --------->ALFIN1                            <---------ARR11(3) -----------GT1             <---------TOE2(3)                              --------->ARR11(3) ------MYB46(3)           <---------AHL20(2)                              --------->RVE1(1) ----->MYB52(2)       <----------DOF2  <---------GLK1(2)            ----------->GT1   ---------->DOF2 ----->MYB.PH3(2)---------->DOF2  --------->ARR14(2)      <----------DOF2 --------->CCA1(1)   tgttactttattccaagtttaaagctttttaatgtggaactgattctccttgtatagtttctttttggtttagtaaatatctcgagaagaaagtgtattt  24816800  Previous    Next  AGI:  At1g66500.1    Description:  zinc finger (C2H2-type) family protein. similar to S-locus protein-related [Arabidopsis thaliana] (TAIR:AT5G43620.1); similar to S-locus protein 4 [Brassica rapa] (GB:BAA85453.1); contains domain PTHR15921 (PTHR15921) Range:  from: 24814812    to: 24816313    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g66510.1    Description:  AAR2 protein family. similar to CePP protein [Brassica napus var. napus] (GB:CAB89180.1); contains InterPro domain AAR2 (InterPro:IPR007946) Range:  from: 24816500    to: 24819811    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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