Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    ----------->GT1                                --------->GLK1(2)                 --------->DAG2                         <------MYB83          ----------->GT1                               <------MYB46(1)       ---------->DOF2---------->DOF2               --------->ATHB12       --------->MYB52(1)                          <---------YAB1<---------ARR14(2)  <-----------------AGL1                 ----------->HVH21       --------->ARR14(2) -----ZAT18     ---------->DOF2        ----------->GT1<---------WOX13(1)                           <-   ctcttcacctaaaggtaaaaaagttaaagaagaagatggagatgtgacaaactctgattggtttgagaattcgtttctacttccatcaattgagagtctt  24781500                --------->TOE2(3)         <-------GAMYB        ----------->GT1                                                                 ---------->DOF2     --------->ARR14(1)                                                  <---------MYB46(3)    --------->ARR11(1)                                              <------MYB46(1)   <---------YAB1-    --------->ARR14(2)                                              <------MYB83    --------->At4g35610    <---------ARR14(2)                           ----------->GT1  <--------P     <---------At4g35610- --------ANAC46--------->ANAC46         <---------ANAC46        <---------MYB46(3)  <---------At4g35610   ggtgtggattcggttaaacgtaaatggaatgttgtgcctatggagtttaagaagaaaattgaagagaggttggagttgttggaggctgatgaaagtgaat  24781600                                                 ---------->DOF2                                         --------->LBD16                                           <<                       ----------->GT1  <---------ANAC55(2)                            <---------ANAC58                      ----------->GT1   <---------ANAC58                ----------->HVH21    --------              --------->ARR11(3)        <---------ANAC46       <---------YAB1          <---------ANAC58 -------->ANAC58     <---------TOE2(3)  <---------ANAC58   <---------DAG2   ------>ZmHOX2a(2)<------- -------->ANAC58     <---------TOE1(3)  ----------->GT1  -------->P  <-----------------------TaNAC69(2)   gcaagaaaatggaagagatgttgaaggttaaaaatagcgaatgcgtgaaacaaaagactaaccttttgaatgaggtgatcgatgtgatgacttgagattt  24781700                                                                     --------->TOE2(3)                                                                   --------->ARR11(3)      ----------->GT1                                              <---------ARR11(3) --------->CCA1(2)                            <-----------RAV1(1) <---------CCA1(2)   <-------TEIL <<<<<<<RAP2.2                           <----------DOF2    <----------DOF2       --------->DAG2 ->ARR11(3)             <---------MYB46(3)   <---------TOE2(3)--------->AHL20(2) ---------->DOF2 --ARR11(3) <---------TOE2(3)      <---------YAB1        <-----------GT1  --------->YAB1   tagatatgaagtttaatgttttctagtggtttatcttatgactcttttatgttggattatttctttatatatcttagcataaaaaaagttcattttggta  24781800                              <---------ANAC55(2)                              --------->ANAC55(2)                              --------->ANAC58                              --------->ANAC58                              --------->ANAC46                            <-----------GT1                                      --------->AHL20(2)                 <---------AHL20(2)                             --------->YAB1<--------HAHB4                 --------->AHL20(2)                             --------->TOE2(3)<---------AHL20(2)              <------ZmHOX2a(1)                                <---------YAB1<---------YAB1          ---------->DOF2<---------ICU4                        ----------->GT1--------->YAB1  ------>ZmHOX2a(2)     ----------->GT1  ----------->GT1    --------->YAB1     --------->ICU4   --------->ICU4 ---------   ----------->GT1  --------->ICU4      <---------ATHB12 <---------YAB1    <----------DOF2  <--------   gaaaacagagaaaaaaggattaattagtaattacgcaatctaatcaaattttaaaacttgtgattatgttaatagcgctataattaaaaactctgatccg  24781900                                  *TSS                                <--------P                               <---------ANAC58                               <---------ANAC58                               <-------GAMYB                              <---------MYB46(3)                            <---------MYB52(1)                           --------------------->WRI1                           <----------DOF2 --------->REM1(1)                     --------->YAB1                      --------->GLK1(1) <---------MYB52(1)      --------->At4g35610      --------->AHL20(2)                      <---------GLK1(1)<---------At4g35610      <---------At4g35610 --------->AHL20(2)                     --------->ARR14(2)--------->LBD16          <---------ZAT2  <---------ATHB12     --------->YAB1  <---------GLK1(2)--------->ANAC46          --------->ZAT2  <<<<<<<<<ARR1      -- >ARR14(2)          <------------------------ANAC81 <-----------HVH21           <<<<<<<<<ARR2     --- -ARR14(2)    <----------DOF2<---------AtMYB61     <-----------RAV1(1)------>ZmHOX2a(1) --------->AHL20(2)   tttaaaatgaaaatgacttttcagatttcctttggttgctccgctacttctcactgtcgctctctcagcttcctctctcacaatcataaaataaaaaaca  24782000                                     --------->ARR14(2)                                     <---------ARR14(2)--------->LBD16                                  <---------ANAC58     ------>NtERF2         <---------HSFB2a(2) <---------ARR11(3)       <---------ETT(1)         --------->HSFB2a(2) <-----------ARR10        <---------LBD16     <---------ANAC58--------->ARR14(2)              <---------LBD16     <---------ANAC58<---------ARR14(2)    <---------MYB52(1)                                     ---    <---------HSFC1(2)       --------->ARR14(2)<---------ANAC58                    <---------TOE1(2)    --------->HSFC1(2)       --------->ARR11(3)<---------ANAC58       --------->ANAC58          <---- ------->DAG2    <---------LBD16  <---------ANAC58<----------DOF2     --------->ANAC46      <-------- ------->DOF2--------->ANAC46<---------ARR14(2)<---------ANAC46       --------->ANAC58    <---------At4g35610   aaaagtagcttctccaagacgcggttcccaatatctgcgtttcccgtttgcgttttccggcaatggctctccaagccactactactacgttctgcttctc  24782100      <----------DOF2                                                                            <--- ------>LBD16        ------>ZmHOX2a(1)                 ---------->DOF2                          <---- -----LBD16  <------ZmHOX2a(2)               ------>ZmHOX2a(1)             ------>ZmHOX2a(1)<-------- --DOF2      ===============HOX2a_HOX2a      <---------CCA1(2)             ==========================   cggtccaactttccgatcaactcctcactcactcacttcaaaacgtcctatctccatcaaagctactacttcttctccttcaagactctccaattcacga  24782200                                                                                               <-----                        --------->AHL20(2)                      <---------YAB1                 <-----         ----------->GT1<---------ICU4                      <---------GLK1(2)               <--------      ---------->DOF2  --------->AHL20(2)              --------->TOE2(3)                    <--------   --------->TOE2(3)   <---------AHL20(2)              --------->TOE1(3)                  <---------YAB1 ---ZmHOX2a(2)         <---------ATHB51                --------->YAB1                  --------->ARR14(2) -----ARR11(3)         <---------ATHB12             <-----------GT1 --------->AHL20(2) <---------ARR14(2) ---GT1 <---------TOE2(3)                         <----------DOF2--------->YAB1        ---------->TaMYB80 ===HOX2a_HOX2a  --------->TOE2(3)           <<<<<<<<<MYB2--------->AHL20(2)           <---------KAN4(2)   tctaatctcaaaggttaaatctcaaataatttctccatcacattttggttttctttaccataaattctcataaaatgttgaaattgcagaatatgcttgg  24782300                                                                                          <----------DOF2 -MYB46(1)       <---------GLK1(2)                                                       <---------ANAC58 -MYB83       --------->HSFB2a(2)             --------------->AtSPL8               --------->GLK1(2) -ANAC58   <---------YAB1            <---------AHL20(2)              <---------MYB46(3)  <---------ANAC58 -ANAC58  --------->TOE2(3)         --------->AHL20(2)     ----------->GT1  ---------->DOF2      ----   tttatgcattaatcttatagaatttgtatttttgtatattatatagtctttgtacatgaaattgtatatagttgttgagaaagagaattttgctttgtac  24782400  Previous    Next  AGI:  At1g66420.1    Description:  transcription regulator. similar to DNA-binding storekeeper protein-related [Arabidopsis thaliana] (TAIR:AT1G61730.1); similar to unknown [Populus trichocarpa] (GB:ABK93310.1); contains InterPro domain Protein of unknown function DUF573 (InterPro:IPR007592) Range:  from: 24780847    to: 24781695    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g66430.1    Description:  pfkB-type carbohydrate kinase family protein. similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT5G51830.1); similar to fructokinase 3 [Lycopersicon esculentum] (GB:AAR24912.1); contains InterPro domain Carbohydrate/purine kinase (InterPro:IPR011611); contains InterPro domain Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); contains InterPro domain Ribokinase; (InterPro:IPR002139) Range:  from: 24781934    to: 24784292    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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