Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------AHL20(2)                                                       --------->AHL20(1)         <---------AHL20(1)                   --------->TOE1(3)                   --------->AHL20(2)         --------->AHL20(1)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)             <---------AHL20(1)         <---------AHL20(2)     <xxxxxxxxxxxxxxxxsmallRNA(i)                   <---------AHL20(1)            <---------ARR11(3)     --------->ATHB12                               <---------AHL20(2)            --------->ARR11(3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           --------->AHL20(2)            --------->AHL20(2) <---------At4g35610                      <---------ICU4         --------------->AGL15 --------->At4g35610   ---------->DOF2   --------->AHL20(1)  <---------YAB1    --------->AHL20(2) --------HVH21     --------->TOE2(3)     --------->AHL20(2)--------->YAB1     <---------AHL20(2) ----TOE2(3) --------->ANAC58            <---------AHL20(2)<---------ICU4     --------->AHL20(2) ----TOE1(3) --------->ANAC58           --------->AHL20(2)<---------YAB1     --------->ICU4  <------- -ARR10<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)         --------->AHL20(1)  ----------->GT1 <----------DOF2   gtcatctccattggtaagaaaccttcaaagtttctcaaaaaaaaaaattactaatattttattatgacttaattttgtaattaatatattcttttctttt  24780400                                                                                   <xxxxxxxxxxxxxxxxx                                                                               ----------->GT1     <x                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     --                             <---------REM1(2)    --------->YAB1          <---------YAB1          xxx                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <----                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------YAB1    <----------DOF2     <---------YAB1  <-------GAMYBxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<---------ICU4      <---------DAG2     <---------AHL20(1)  --------->At4g35610        <---------ZAT14     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   --------->AHL20(2)  <---------At4g35610        --------->ZAT14     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->AHL20(1) ---DOF2    <---------AHL20(2)                   --------->ICU4    ------>ZmHOX2a(1)     <---------AHL20(2)   tttcagttgtctaattacttcaaaatttctctgcacagaaacgtttctgtaattatgttattctctctcctcctttatgaattgtttatattatattagt  24780500                                 <-----------ARR10                                 <---------ARR11(3)                                 --------->ARR11(3)                             <---------At4g35610                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                     --------->MYB46(3)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    xxxxxxxxxxxxxxxx>smallRNA(i)             xxxxxxxxxxxxxxxx>smallRNA(i)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                           ---------->ID1 --------->ANAC58   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 <-----------GT1 --------->ANAC58   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)              --------->AHL20(2) xxxxxsmallRNA(si3)<-----------GT1                                    <---------AHL20(2) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <-----------GT1         --------->AHL20(2) -------->DOF2    xxxxxxxxxxxxxxxx>smallRNA(s)                       <---------AHL20(2)       ------- xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)------>ZmHOX2a(2)                 <---------AHL20(1)      <------- -----ZAT6<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      ------------>CBF--------->AHL20(1)<---------MYB52(1)   gaaaagcaactctcaaaattgtaaccgatggagatgatctaacctatttaccaaaaacaattcagacaaaatttattttcggtttagtcgttttttttcg  24780600                                         --------->YAB1                             ----------->GT1               --------->AHL20(2)        --------->ATHB12               <---------AHL20(2)        <--------HAHB4               --------->AHL20(1)        <---------ICU4               <------------CBF              -              --------->AHL20(2)        --------->ICU4           ------>ZmHOX2a(2)                  -              <---------AHL20(2)        <---------YAB1          <------ZmHOX2a(2)              ------ --------->TOE2(3)         ---------->DOF2                     <---------ARR11(3)             ------- --->ID1     <---------AHL20(1)       <---------ICU4           --------->ARR11(3)  --------->HSFB2a(2) ----GT1     --------->AHL20(2)       --------->YAB1       ---------->DOF2         <---------HSFB2a(2)   ttttcttaatttcaaaataatttactgggaaaagaaaaaatcatcattacgctcatgtgaaaaaagatcgttcattgtatgggttttggaagttagaaaa  24780700                                                               ----------->TBP                                                            --------->AHL20(2)                                                            <---------AHL20(2)    --------->ANAC46                                    <---------AHL20(2)    --------->ANAC58                                    --------->AHL20(2)    --------->ANAC58           <---------ARR11(3)     <----------DOF2           --------->TOE2(3) -------->ANAC58              <---------CCA1(2)    --------->ARR11(3)<---------ANAC58 -------->ANAC58            --------->AHL20(2)     <---------ARR11(3)<---------ANAC46          ------ --->DAG2          <------------CBF              --------->ANAC58    <---------ANAC58          ------ --->DOF2      --------->ANAC46--------->ARR11(3)--------->ANAC58   <-------TEIL--------->TOE1(3) <--   gtaagcaagcaacttataccctattggccattatatctaccgagaaacaacaagctctttaatttataaattcgtgtagttgccttaaacaaaccccaag  24780800                       --------->YAB1                 ------->GAMYB                 --------->YAB1                 --------->TOE2(3)                --------->MYB46(3)              ---------->DOF2        --------->ANAC58               <---------YAB1                  <----------ARF1        --------->ANAC58            --------->GLK1(2)              <---------MYB52(1)        --------->ANAC46  <---------TOE1(2)  <-----------HVH21--------->ANAC58 --------->YAB1--------->ANAC58    <---------GLK1(2)          --------->ANAC58 --->ANAC58    --------->ANAC58    --------->ARR11(3)    --------->At4g35610 --->ANAC58--------->AtMYB61       --------->ARR14(2) --------->HSFC1(2) --------DOF2--------->MYB46(3)    <---------ARR14(2) <---------HSFC1(2)                           --   ctttcattacacaccacaaccaaaatcgtagtttgaagattctgatatgtcaaagaagcatctcaagccgttggagacatgttttgaagatgaagaagat  24780900                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                        --------->LBD16                                                                        ------>NtERF2                                                                      <---------LBD16                                                                      <------NtERF2                                                                      --------->ATERF1(1)                                                                     <---------ATERF1(1)                                                                     ------>NtERF2                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)                                                                   <---------At4g35610                                                                   <---------ZAT2                                                                   --------->At4g35610                                                                   <------NtERF2                                                                   --------->ATERF1(1)                                                                   --------->RAP2.3(1)                                                                   <---------ABI4(2)                                                                  <<<<<<<<<AtERF-4                                                                  <<<<<<<<<AtERF-3                                                                  <<<<<<<<<AtERF-2                                                                  ------>NtERF2                                                                  <---------RAP2.3(1)                                                                  <<<<<<<<<AtERF-1                                                                  <<<<<<<<<AtERF-5                                                                  <<<<<<<<<AtERF-7                                                                  <---------RRTF1(1)                                                                  <---------ATERF1(1)                                                                  <---------DEAR3(2)                                                                  <---------ORA47(2)                                                                  <---------ERF1                                                                 <---------ANAC46                                                                 <---------ANAC58                                                                 <---------RAP2.3(2)                                                                 <---------RRTF1(3)                                                                 --------->ATERF1(2)                                                                 <---------RAP2.6(2)                                                                 <---------RAP2.3(3)                                                                 <---------RRTF1(2)                                                                 <---------ATERF1(2)                                                                 <---------ANAC58                   <---------ARR11(3)                            <<<<<<<<<<AtTINY2            <------                   --------->ARR11(3)                            <---------DEAR3(1)         <--------                 --------->LBD16                                --------->RAP2.6(3)  ------->GAMYB  <       <-----------GT1                                          --------->ATERF1(1) --------->MYB46(3)      <-----------GT1    ----------->HVH21   --------->YAB1 <-----------RAV1(1) <-------TEIL--------- --------->GT1------>ZmHOX2a(1)  --------->ABI4(2)    <------ZmHOX2a(1)<---------ETT(1)----------->RAV1(2)   gatgttatttatcttcctccaggtcttgtgaccggtgcaacttccaagaagaatgaggagttttgtggcggctccggcaaggtacaaccgtctgagatga  24781000        <---------ZAT14       ----------->HVH21       --------->ALFIN1    <------NtERF2     ------->GAMYB  <---------DEAR3(1) --------->MYB46(3)                 <---------At4g35610 ---REM1(1)         --------->At4g35610                 --------->At4g35610 -At4g35610         <---------At4g35610          <---------HSFB2a(1) -----------HVH21  --------->MYB52(1)            --------->HSFB2a(1)                ----------->GT1-- >At4g35610  <---------PCF5     <---------------------WRI1             ---------->DOF2            <--   agcgtcggagtgaagggacctcaacggacatgacttcgaagagagccaagaaggtttcagcagaagatgagaagaaagttggagaatggacaaaaaaccc  24781100                                                       <---------AHL20(1)                                                       <---------AHL20(2)                                                       --------->AHL20(2)                                                      <---------AHL20(2)                         --------->At4g35610          --------->AHL20(2)                         <---------At4g35610       -------->ATHB1                                  --                      <------ZmHOX2a(1)            <--------HAHB4                                  <-                <---------ANAC46                   <---------ICU4                                 <--                <---------ANAC58                   --------->ATHB51                        <------ZmHOX2a(1)              --------->ZAT14                     --------->ICU4              --------->DAG2<--------              <---------ZAT14                --------->ANAC58                ---------->DOF2---------             --------->ALFIN1                --------->ANAC46    <---------ARR11(3)      <---------TOE1(3) ------->ARR14(2) --------->ALFIN1           --------->ANAC58    --------->ARR11(3)      <---------TOE2(3) -------CCA1(2) <---------ANAC58      <---------YAB1 <---------YAB1 ----------->HVH21<---------MYB52(1)   atattttcaaagactgtggagtgaggaagatgagattgttatgctacaaggaattattaaatttgaagatgttacagggaaaagtccgtttgaggataga  24781200                                                                                               <-----                                                                                           <---------TOE1(1) ------->ANAC55(2)                                    <<<<<<<<<<<<<<<<<LFY                 <---------TOE2(1) --------ANAC55(2)          <---------MYB52(1)   ----------->RAV1(1)                     --------->CCA1(2) -------LBD16         --------->GLK1(1)      <---------ZAT18      <---------GLK1(2)<------ZmHOX2a(1) -ARR14(2)           --------->ARR11(3)      --------->ZAT18    --------->ICU4    ----------->GT1 --- >ARR14(2)           <---------ARR11(3)     <---------ZAT6      ----------->ARR10----------->GT1 ----   cacgggtttatagaattcgtcaagaactccattagcttcgaggctagtgtgcaacaatacattggcaagattagccaattgaagaggaaatatacgagga  24781300  Previous    Next  AGI:  At1g66420.1    Description:  transcription regulator. similar to DNA-binding storekeeper protein-related [Arabidopsis thaliana] (TAIR:AT1G61730.1); similar to unknown [Populus trichocarpa] (GB:ABK93310.1); contains InterPro domain Protein of unknown function DUF573 (InterPro:IPR007592) Range:  from: 24780847    to: 24781695    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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