Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                  <--                                                                                                  ---           <---------AHL20(2)                                                                    ----          --------->AHL20(2)                                                                     <---      <---------MYB52(1)                                                                         <---   <------------MYB.PH3(1)                                                                       ---- --------->MYB52(1)                                                                             ----- -------ICU4                                                                                    <---- ------>YAB1              <---------ZAT6 --------->YAB1   --------->AHL20(2)            <---------AHL20(2) ------ATHB12    <-----------GT1      --------->YAB1   --------->YAB1         <---------YAB1---------   tcataaccgttatttaatattacacctagtcttcatcaaataatcaaaatcacaaaataatcaaatatcaaaaacaagttgttatagtttttaatcaaaa  24751500                                                >>>>>>>GRF7   <---------YAB1                              <-----------RAV1(2) --------->YAB1                              <-----------HVH21 -------->HAHB4                             --------->TGA2(1) <---------ICU4                           <---------ICU4 -------->ICU4                         --------->YAB1 -------ICU4                           <---------ICU4 ------>YAB1                          <---------ATHB51 ----->AHL20(2)                       <---------ATHB12 ------AHL20(2)                       --------->ICU4          --------->YAB1           <---------ARR14(2) ------ATHB51             --------->ARR11(3)<---------bZIP60(1)                     --------->YAB1 ----->ICU4               <---------ARR14(2)--------->bZIP60(1)             --------->HSFB2a(2) ---->AHL20(2)            <---------ARR11(3)<---------TGA2(1)<---------ATHB12 --------->HSFB2a(2)  -- -----AHL20(1)           --------->RVE1(1)--------->YAB1   --------->WOX13(1) <---------HSFB2a(2)  <- >YAB1                 <---------GLK1(2) --------->ICU4 --------->TOE2(3)   <---------HSFB2a(2)   ---   taattatgacatagcatagattatagaatatctcgttcaaataatgatgtcaggtttacatcaatcaaactgaattttctcgagaagcatattttgaaaa  24751600                                                                                                    <                                                                                        <-----------GT1                                                                                    --------->AHL20(1)                                                                                    <---------AHL20(1)                                                                       --------->AHL20(2)         ---                                                                       <---------AHL20(2)         <--     <---------AHL20(2)                                                --------->AHL20(1)        <---    <---------AHL20(2)                                           <------ZmHOX2a(1)  --------->AHL20(2)    --------->AHL20(2)                                         ----------->GT1      <---------AHL20(2)    <---------AHL20(1)                       <---------At5g28300----------->GT1    <---------AHL20(2)    --------->AHL20(1)                      <-----------GT1---------->DOF2         --------->AHL20(2) ------->AHL20(2)                      <---------YAB1  <---------AHL20(2)    ----------->GT1   ------ --------AHL20(2)        ---------->DOF2--------->AHL20(2)<---------AHL20(2) <---------ANAC55(2) <--- ------>AHL20(2)---------->DOF2--------->GLK1(2)      --------->AHL20(2)    --------->MYB59 <--------   ttaaaatttattcgcagaaaaagaagagaaaggaatctactattatttactgtatattatataaagaggaaaataaaataggtaaataaatttcctttta  24751700                           --------->ARR14(2)               <-------GAMYB             <---------ANAC46             <---------TOE2(3)             <---------ANAC58             <---------ANAC58                        <---------ATERF1(2)                   --------->ANAC58    <----------DOF2     --------->ANAC58             --------------->AtSPL8             --------->STY1(2)   <---------ANAC58     --------->ANAC46             --------->ATERF1(2)         ---------->DOF2   <---------ANAC58     --------->ANAC58            <---------ANAC46           --------->YAB1 ---------WOX13(1)    <---------ALFIN1 <----------DOF2                         <---------AHL20(2) ------>ATHB51<---------MYB46(3)      <---------ANAC46                         --------->AHL20(2) -------ICU4 <---------RAP2.6(2)      <---------ANAC58 <---------MYB52(1)     <---------ATHB12 ------AHL20(2)<<<<<<<<<<AtWER <---------At4g35610  <---------LBD16       ------------>CBF --------->ANAC58 --->YAB1   <---------LBD16<---------ARR14(2) <---------ARR11(3)        --------->ANAC46--------->ZAT2 ------YAB1----------------------->TaNAC69(2) --------->ARR11(3)     <---------ARR14(2) <---------ZAT2 --DOF2 <<<<<<<<<RAP2.2<---------LBD16<---------ANAC58--------->LBD16--------->ARR14(2) <---------STY1(2)   taattgctttagattgcggttgtaccacggctctgctcttgcttttaagaacttgccggtactaaatttcatatactccaattaaaagctagctcgaaac  24751800                                 --------->YAB1                           <---------ICU4                        --------->AHL20(2)                           --------->YAB1                    --------->AHL20(2)                          --------->ICU4                     --------->ATHB51          <----------DOF2                          <---------YAB1                    <---------YAB1          <-----------GT1                        --------->YAB1                      --------->ICU4    --------->AHL20(2)                       <---------AHL20(2) ----------->TBP --------->YAB1      <---------AHL20(1)                      --------->AHL20(2)  <---------YAB1  *TSS   <---------AHL20(2)<<<<<<<<<<GT-3b                <-----------GT1 <---------YAB1           <---------YAB1       <---------AHL20(2)          <---------AHL20(2)  <---------ICU4           <---------CCA1(2)      --------->AHL20(1)          --------->AHL20(2)  --------->YAB1         --------->YAB1          --------->AHL20(2)<<<<<<          <---------AHL20(1) --------->ICU4     --------->AHL20(2)        <---------GLK1(2) <<<<<<<<<TBF1   cccaaatgttattttatttttctatataataataatcatacattataaaaaaaaatcatatcattatttaaaaatagaattttatttttctttcttcttc  24751900      <---------ICU4      --------->YAB1     <---------YAB1                                                                --------->AHL20(2)   -------->ATHB1                                                                  <---------AHL20(2)   --------->ATHB51          <---------ICU4                            --------->AtLEC2   <--------HAHB4--------->ANAC55(2)                               <---------ARR11(3)   <---------ICU4<---------ANAC58                                  <---------ARR14(3)   --------->YAB1<---------ANAC46                                  --------->GLK1(2)  --------->ICU4 <---------ANAC58                         --------->At4g35610     --------->YAB1 ----  <---------ATHB12       ------>ZmHOX2a(1)      <----------DOF2    --------->ARR11(3)            <---  <---------ATHB51--------->LBD16<------------------------ANAC81   --------->ARR14(3) <---------TOE2(3) <<<TBF1<---------YAB1  <---------MYB59 <---------YAB1    <---------At4g35610<---------ATHB12    <---   ttcaattattatgacactcccgtgttcctaatcttttctcttattcttctctttcttctcatcttacaaaatcttgcaaatcaattttaatgaagagaga  24752000                                                                              --------->WRKY12                                                                              ----------->HVH21                                                                            --------->At4g35610                   ------>NtERF2                                          <------NtERF2                   --------->LBD16                                 <---------HSFB2a(1)                  ------->GAMYB                                    --------->HSFB2a(1)         <xxxxxxxxxxxxxxxxsmallRNA(i)                              --------->At4g35610             <-        --------->At5g28300                               ---------->DOF2--------->LBD16           <-        --------->LBD16                                 <---------YAB1------>NtERF2          <-------    --------->AtMYB61      --------->DAG2          ----------->GT1 --------->ZAT2          <---------ANAC58    ------->GAMYB --------->ANAC46           --------->YAB1<---------TOE2(3)<---------At4g35610    --    <---------ALFIN1<---------LBD16         <---------ATHB12       --------->HSFC1(2)      ==========   --------->MYB46(3)  <------NtERF2        ----------->HVH21      <---------HSFC1(2)      <---------ANAC58   <---------MYB52(2) --------->LBD16       ----------->TGA1       <---------At4g35610     <-------GAMYB   <---------MYB55(2)--------->DEAR3(1) <---------YAB1<---------MYB46(3)<---------ANAC46  <---------MYB46(3) ----->ZAT18     --------->MYB46(3)  <-------TEIL <---------DEAR3(1)  --------->MYB52(1) <---------AtMYB61 ------ZAT18    --------->At4g35610--------->GLK1(1)--------->At5g28300<---------LBD16=============== ------ZAT14  --------->YAB1  --------->ALFIN1 --------->ETT(2)   --------->GLK1(2)   <----------DOF2   gcacaaccaccgtgaatcatccgccggagaaggtgggagttcatcaatgacgacggtgattaaagaagaagctgccggagttgacgagcttttggttgtt  24752100                                --------->bZIP60(1)                                <---------bZIP60(1)                                <---------TGA1a                                --------->TGA1a                                <---------O2                                --------->O2                                <---------bZIP60(2)                                >>>>>>>>>>AtbZIP1                                <---------ANAC58                                <---------ANAC58                              <---------TGA2(2)                             ----------->HVH21                             ----------->TGA1                       <---------O2                       --------->O2                    ----------->HVH21                    ------->GAMYB --------->ALFIN1                                           <-------                    =============MYC_MYB                                                     --------                    <---------ETT(1)                                                  --------->HSFB2a(1)      ====================================bZIP_DOF                                   <---------ARR11(1)      ---------->DOF2  <---------TGA1a                                               --------->ARR14(2)      ===========================bZIP_DOF                                            <---------ARR14(2) --------TOE2(3)    --------->ANAC46   --------->ANAC58                              ------->TEIL --------TOE1(3)    ======================MYC_MYB                                    --------->GLK1(2) --MYB46(3)       --------->At4g35610  --------->ANAC58                              <-----------ARR10 ------->MYB59 <------ZmHOX2a(2)<---------ANAC46                             <---------GLK1(2)    --- ================================MYC_MYB   --------->ANAC58   <---------HSFC1(2)    <---------ARR14(1) ================================bZIP_DOF  --------->ANAC58   --------->HSFC1(2)    <---------CCA1(2)   ttaggttacaaagttcgatcatccgacatggctgacgtggcacacaagcttgaacagttagagatggttcttggtgatggaatctcgaatctttctgatg  24752200                                                                   <---------LBD16                                                                 <---------ARR14(2)                                                               <---------ETT(1)                                                               ----------->HVH21                                                              --------->MYB46(3)                                  <---------ANAC46      ------>ZmHOX2a(2)                                  <------MYB83         <------ZmHOX2a(2)                                  <------MYB46(1)     --------->ARR14(2)                                 <------MYB83         <---------ARR11(3)                                 <------MYB46(1)      <---------ARR14(2)                                 <---------MYB46(3)   --------->ARR11(3)                                 --------->MYB59      <---------AGP1 --------->LBD16                =                               <--------P            <---------CCA1(2)                              <                             <---------MYB46(3)   <---------LBD16--------->ARR14(2)  ----------->HVH21     <---------ICU4    ------>ZmHOX2a(2) --------->ANAC58     --------->DEAR3(2)   ----------->RAV1(2) --At4g35610          --------->GLK1(1)---------->DOF2<-----------ARR10--------->ARR14(2)          -- ->At4g35610    ==============HOX2a_HOX2a--------->ANAC58  <---------WRKY18(1) ---------->DOF2     <- ---->TEIL      ------>ZmHOX2a(1)--------->MYB55(2)  <---------ARR14(1)<---------ARR14(2)       -----   aaactgttcattacaatccttctgatctctctggttgggtcgaaagcatgctctcggatcttgacccgacccggattcaagaaaagcctgactcagagta  24752300                                              ------->MYC2                                              <-------MYC2                                              ------->MYC3                                              ------->PIF4                                              <-------PIF4                                              <-------MYC3                                              <-------PIF5                                              ------->MYC4                                             <---------TGA1a                                             --------->TGA1a                                             <---------ANAC55(2)                                             --------->bZIP60(2)                                             <---------O2                                             --------->ANAC55(2)                                             --------->ANAC58                                    ----------->HVH21                                   ------->PIF5                                   ------->MYC3                                   <-----------HVH21                                   <-------MYC2                                   ------->MYC2                                   <-------MYC3                                   <-------PIF5                                  --------->O2------->PIF5                                  --------->ANAC55(2)                                  --------->ANAC46  --------->O2                                  --------->TGA1a   <---------O2                             ------->TEIL    --------->O2<------NtERF2                             <---------ARR14(2)     <---------TGA1a                             --------->ARR14(2)----------->HVH21               ------>ZmHOX2a(1)  <---------O2<-------MYC4 =====================HOX2a_HOX2a =====================bZIP_bZIP ------>ZmHOX2a(2)          <---------CCA1(2)--------->ANAC58 =====================HOX2a_HOX2a <---------TGA1a   --------->TGA1a ------ZmHOX2a(2)       <---------ANAC46     --------->ANAC46     <------ZmHOX2a(1)                 < ------->ARR11(3)     --------->ZAT14      <------------OsbHLH66 <----------ID1                ------ --------ARR11(3)     <---------ZAT14  <---------ANAC46<---------DEAR3(1)                     <------ ---->SPL7   ----------->RAV1(2)  --------->bZIP60(2)<-----------HVH21                     ------>ZmHOX2a(1)   cgatcttagagctattcctggctctgcagtgtatccacgtgacgagcacgtgactcgtcggagcaagaggacgagaattgaatcggagttatcctctacg  24752400  Previous    Next  AGI:  At1g66350.1    Description:  RGL1 (RGA-LIKE 1); transcription factor. Identical to DELLA protein RGL1 (RGL1) [Arabidopsis Thaliana] (GB:Q9C8Y3;GB:O65367); similar to RGL2 (RGA-LIKE 2), transcription factor [Arabidopsis thaliana] (TAIR:AT3G03450.1); similar to GIA/RGA-like gibberellin response modulator [Gossypium hirsutum] (GB:AAY28970.1); similar to DELLA protein [Malus x domestica] (GB:AAY56750.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59753.1); contains InterPro domain GRAS transcription factor (InterPro:IPR005202) Range:  from: 24751858    to: 24753706    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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