Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <-------GAMYB                                        <-----------RAV1(1)                                      <---------ANAC46                                   <---------DEAR3(1)             ----------->RAV1(1)     ------>ZmHOX2a(2)                <-------TEIL    <---------REM1(2)      <---------CCA1(2)                --------->ARR11(3)      ---------->DOF2          --------->HSFB2a(2)    --------->LBD16                   <---------ARR11(3)    --------->ANAC46           <---------HSFB2a(2)   --------->ANAC55(2)                <-----------ARR10 ------->ARR14(2)         <---------AtMYB61          <---------ANAC55(2)    --------->ARR11(3)<------ --------ARR14(2)       <----------DOF2 --------->ALFIN1  --------->ZAT6    <---------ARR11(3)-------   aaatccacaaaagagaaatgcatgagctttggtctagacggtgtgttgctcaaacccgtatcactagacaacataagagatgttctgtctgatcttctcg  24741000                                                                     --------->LBD16                                                                    --------->ANAC58                                                                    --------->ANAC58          <---------SPL7                                       --------->At4g35610   --------->LBD16                                    ----------->GT1------>NtERF2  <---------ANAC46                               --------->LBD16  <---------ATERF1(1)           -----  --------->LBD16         --------->DAG2        <-----------RAV1(2) --------->ANAC46            <---- <---------LBD16        ---------->DOF2       ----------->RAV1(1)--------->PCF2  ----------->GT1<---- ---HSFB2a(2)<---------TOE1(1)           <---------ALFIN1      <---------At4g35610--------->LBD16 -->HSFB2a(2)<---------TOE2(1)   <---------MYB46(3)  <------ZmHOX2a(1)           <---------ANAC55(2)   agccccgggtactgtacgagggcatgtaaaggcgatggatgccccatgccccagaggagtaattccgctcccgccttcttctcccgtaaaacatcggaag  24741100                                                                       ----------->GT1                                                                    ---------->DOF2                                                           --------------->AGL15                                                          --------->TOE2(3)                    <---------ZAT18   --------->ETT(1)  --------->ARR11(3)                   <---------ANAC46 <-----------HVH21   <---------ARR11(3)                  --------------->AtSPL8    <----------DOF2<---------------AGL15 ---->At4g35610   <---------------AtSPL8<------NtERF2  --------->GLK1(1) -----ZAT2   <---------AHL20(2)  <---------GLK1(2)     <---------GLK1(1)                            < -----At4g35610<------------CBF  <------------CBF     <---------ARR11(3)               <---------GLK1(2)   ctgatgttctctggtttaattgtgtacatatcagagattgtcggagcgttttggatgatatcttaaaacagaaagggaataacaaaatagaaactctaaa  24741200                                                      --------->YAB1                                                      <---------ICU4                                                     <---------YAB1                            <-----                 <---------ARR14(2)           ----------->GT1                                 ------>ZmHOX2a(1)             <------NtERF2                   <---------AtMYB61                      <-----------RAV1(1)           --------->ALFIN1                <---------MYB46(3)                      <---------TOE2(3)         <---------ANAC58                 --------->ALFIN1             --------->ANAC55(2)   --------         <---------ANAC58                 <---------AtMYB61            <---------ANAC55(2)   --------      <-----------HVH21        <------ZmHOX2a(1)   --------->YAB1 <---------At4g35610     <---------- ---------MYB52(1)    <-------GAMYB    --------->ALFIN1           --------->At4g35610    <---------CCA1(2)   ccggtatgtgtccgtggcgatttcggttatagaggaacaagatggtggtggtataatcataccatttcagattacatgtttgactaatgttgtatcctta  24741300                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              <------                                                                                              ------>NtERF2                                                                                              <------                                                                                             <-------                                                                                         <----------DOF2                                                                                       --------->ZAT2                                                                                       --------->At4g35610                                                                                       <---------ZAT2                                                                                       <---------At4g35610                                                                                    --------->ATERF1(1)                                                  <---------ANAC55(1)               --------->TGA2(2)                                                  <---------ANAC46                  <------NtERF2----                                                  <---------ANAC58                 <-----------TGA1                                             <---------MYB46(3)                    <-----------HVH21                                             <-----------RAV1(1)                  --------->TGA2(1)        <-------TEIL                       <---------ANAC58                       --------->bZIP60(1)    ----------->GT1                        <---------ANAC46     <------------CBF  <---------bZIP60(1) ------TBP                           <---------YAB1  <-------TEIL                 <---------ANAC46 ->TOE1(3)        --------->YAB1     <---------TOE2(3)<---------AtLEC2            <---------ANAC58 ->TOE2(3)    <---------YAB1  ------>ZmHOX2a(2)   <---------ANAC58          <---------YAB1   -------- -GT1  <-----------GT1--------->GLK1(2)    <---------ANAC58 ----------->HVH21     <---------ANAC58   tatatgtagttacattcttataagaatttggatcgagttatggatgcttgttgcgtgcatgtatgacattgatgcagtattatggcgtcagctttgcgcc  24741400 -->NtERF2 ------At4g35610 ---->RAP2.3(2) ---->DEAR3(1) -NtERF2                                        ------>ZmHOX2a(2) --->RAP2.3(1)                                  ====================================HOX2a_HOX2a --->ORA47(2)                                  <------ZmHOX2a(2) --->DEAR4(2)           --------->MYB52(2)     --------->GLK1(1) --->ATERF1(1)        <---------MYB52(1)       =====================================HOX2a_HOX2a ---RAP2.3(1)       <---------ANAC58          <---------ARR14(2) ---RRTF1(1)        ----------->GT1           --------->ARR14(2) --RAP2.3(2)        <---------ANAC46     -------->P                          ------>ZmHOX2a(1)     -- ----->At4g35610    <---------ANAC58  <---------ATHB12             <---------ANAC58                <- ->ANAC46   ----------->RAV1(1)     --------->WOX13(1)             <---------ANAC58------>ZmHOX2a(1)-   gcttagtagaacaacaacaatggcgttacttagtttctcaatcaacccgatctccaaaactcatccatggcttcttctccttctcctccaaaactaatcc  24741500                                                                                                    =                                                                                                    =                                                                                                    -                                                                                                   ==                                                                                                   ==                                                                                                   <-                                                                                                  <--                                                                                           ------>ZmHOX2a(1)                                                                                           ==========                                                                                           ==========                       ------>ZmHOX2a(1)                         --------->LBD16    --------->ARR14(2)              ----------->RAV1(1)                              --------->TOE1(2)    <---------GLK1(2)        --------->ANAC46                                       --------->TOE2(2)    <---------ARR14(2) ------->ARR14(2)  --------->ARR14(2)     <---------ARR14(2)   <---------LBD16     ------>MYB46(1)--- --------ARR14(2)  <---------ARR14(2)     --------->ARR14(2)  ----------->RAV1(2)  ------>MYB83   --- ----------------------->ANAC81  --------->REM1(1)    --------->TOE1(2)         --------->ANAC46  <--   aaatccaaacaaacaacaacaaatcctcatcgactacatctccaaatccctccaatccaacgatacctgggaaactctctccaccaaattctcctccata  24741600           --------->TOE1(3)           --------->TOE2(3)        --------->GLK1(2)       <---------GLK1(2)      --------->At4g35610    --------->YAB1                                            --------->ANAC58 --------->WOX13(1)                                        <---------ATHB12 ==================HOX2a_HOX2a                       ------->GAMYB ==================================HOX2a_HOX2a       --------->ANAC46 ----->ZmHOX2a(2)                                    --------->RAP2.6(2) ==================================HOX2a_HOX2a       --------->DEAR3(1) ==================HOX2a_HOX2a                      --------->DEAR3(2) -----ZmHOX2a(2)                                    --------->MYB46(3)                          ----- -------ARR11(3)                                  <---------ARR14(2)                            ----- =====HOX2a_HOX2a                                 --------->ARR14(2)                        <-------- ======HOX2a_HOX2a                             --------->ANAC58         ------>ZmHOX2a(1) <---------ALFIN1 ------>AGP1                                   --------->ANAC46  <----------DOF2    --------->WRKY18(1) ------>ARR11(3)            ------>ZmHOX2a(1)  --------->LBD16--------->ANAC58     <-----------HVH21< -------AGP1------>ZmHOX2a(1)                  --------->ANAC58  <---------DAG2 <---------MYB52(1) <-   gatctatcagattccttaatcgaaacaatccttctccgattcaaaaaccccgaaaccgccaaacaagctttatccttcttccattggtcatcccacactc  24741700          --------->ANAC58          --------->ANAC46          --------->ANAC58          --------->ANAC55(1)          <---------ANAC55(2)          --------->ANAC55(2)       ----------->HVH21                <---------CCA1(2)       <---------MYB52(1)       <---------TOE2(3)      <-----------HVH21        >>>>>>>>>WRKY18      <-----------TGA1        ----------->HVH21     --------->ANAC46    <---------ANAC55(2) ---->ANAC58             --------->ANAC58<---------ARR14(2) ---->ANAC58             --------->ANAC55(2)   <-----------HVH21                    <---------WOX13(1) -ALFIN1 <---------LBD16 --------->ANAC58--------->ARR14(2)                      <---------AHL20(2) ---------ARR11(3) <-----------ARR10  --------->YAB1                           <----------DOF2 --------GLK1(1)  <---------CCA1(2)  <-------TEIL ---------->DOF2             <-----------------AGL3<   gaaatctccgtcacggaatcaaatcttacgcattgacgattcatatccttgtcaaagctcgattactaatcgacgctcgagctttaattgaatcgtctct  24741800              <---------ARR14(2)              --------->ARR14(2)              <---------GLK1(2)                      <------ZmHOX2a(2)            --------->LBD16                         --------->ARR11(3)                 --------->MYB52(2)         ------>ZmHOX2a(1)     <-------TEIL  --------->ICU4                    --------->ATHB12     <-----------GT1         <---------ARR14(2)     <---------ARR11(3)<---------MYB52(1)           --  <---------GLK1(2) <---------ARR14(2)   <---------GLK1(2)           <----------DOF2 <---------MYB52(1) ---------AHL20(2)  --------->ARR14(2) --------->MYB59------>ZmHOX2a(2)   <---------ZAT6           --   gttaaattctcctcccgattcggatttagtcgattcgttgttagatacttatgagatctcatcttctactcctttagtgtttgatttgttagttcaatgt  24741900  Previous    Next  AGI:  At1g66340.1    Description:  ETR1 (ETHYLENE RESPONSE 1); two-component response regulator. Identical to Ethylene receptor (ETR1) [Arabidopsis Thaliana] (GB:P49333); similar to ERS1 (ETHYLENE RESPONSE SENSOR 1), receptor [Arabidopsis thaliana] (TAIR:AT2G40940.1); similar to Ethylene receptor (GB:O49230); similar to mutant Arabidopsis ethylene receptor [Cloning vector pBEO210] (GB:ABM69036.1); similar to ethylene receptor [Prunus domestica subsp. insititia] (GB:CAI64505.1); contains InterPro domain Histidine kinase; (InterPro:IPR005467); contains InterPro domain Histidine kinase, homodimeric; (InterPro:IPR009082); contains InterPro domain Response regulator receiver; (Int Range:  from: 24737825    to: 24741419    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g66345.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G01110.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82481.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 24741382    to: 24743016    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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