Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                ----------->RAV1(1)                                                                           --------->ANAC55(2)                                                                           --------->ANAC58                                                      <---------At4g35610  --------->ANAC58                                                 --------->ANAC58          <---------ANAC55(2)                   <---------HSFB2a(2)           <---------ANAC55(2)       --------->ANAC46                   <---------HSFC1(1)            --------->ANAC55(2)       --------->bZIP60(1)     --                   --------->HSFC1(1)       ---------->DOF2   --------->CCA1(2)                    --                   --------->HSFB2a(2)    --------->At5g28300--------->ARR14(2)                    --             --------------->AGL15       ----------->GT1     <---------ARR14(2)                  ----            ----------------->AGL2      --------->ANAC58     --------->ARR11(3)          ---------->DOF2          <-----------GT1      <----------DOF2   --------->ANAC58       <---------ARR14(2)       <---        <---------DAG2<<<<<<<ZML2       --------->ANAC46     --------->ARR11(1)       <----------DOF2        <----------DOF2   --------->DOF5.7(2)    --------->ANAC55(1)    --------->ARR14(2)       <--- ----->ATHB12<---------------AGL15      --------->ANAC58     <---------ARR11(3)  ---------->DOF2----- -----ATHB12----------------->AGL1    <---------ALFIN1--------->At4g35610  <---------bZIP60(1)  -----   catttgcaaactttacccattctagaacgataactttgacacacggtaaagacgtaagctcaagatttggcaaggttacgccacaaagctttaaagacac  24727700                                             --------->ANAC55(2)                                             --------->ANAC55(1)                                             <---------ANAC55(2)                                             ================================bZIP_DOF                                             --------->ANAC46                                             --------->ANAC58                                             --------->O2                                             <---------O2                                             --------->bZIP60(2)                                             --------->TGA1a                                             <---------TGA1a                                     ----                                           <---------ALFIN1                                     -----                                        --------->ANAC46                                        -----   <-----------HVH21                    --------->ANAC58                                        -----  ----------->GT1                       --------->ANAC58                                       <----- ---->MYB83                            ------->TEIL                                            ------ ------->MYB52(1)                     <---------ALFIN1                                        ------- ---->MYB46(1)                       <---------ZAT14                                         -------- ----->AtMYB61                       --------->ZAT18                   --------->At4g35610  <-------- ------MYB111(2)                     --------->ZAT14              <----------DOF2          <---------ALFIN1 ------MYB46(2)                      <---------ZAT18<------ZmHOX2a(2)  <---------At4g35610--------->MYB46(3) ---->ANAC58                  --------->ZAT6 --------->ANAC58 <---------ZAT18             ------>ZmHOX2a(2) ---->ANAC58      <------ZmHOX2a(1)--------->ANAC46--------->ARR11(3)  --------->LBD16--------->WRKY12   caaactgttacacaagtataggattggaggtatctctactgcaccccacgtaagatcgagattgtgaactttccgcttaacaacatcgttgatccaccgc  24727800                                                            ----------------------->TaNAC69(2) ----->LBD16                                                <----------DOF2 ---->ANAC58                                    --------->TOE1(3) ---->ANAC58                                    --------->YAB1 ---->ANAC46                                  <-----------ARR10 ----LBD16                                    --------->GLK1(2)                 --------->At5g28300 --->LBD16                                   <---------GLK1(2)           --------->ANAC58 -->DEAR3(1)                             ---------->DOF2    <---------DAG2   <---------At5g28300  --- ->ANAC46        <---------ALFIN1<---------YAB1 --------->TOE2(3)        --------->ANAC46         --- -At5g28300  <-----------GT1     <---------TOE2(3)   --------->TOE2(3)   --------->ANAC58     -------   gcaatatgagcattttcactcacctcatccccattaagattgcaaaagaatcttaacttaaactttttcaagtacaagtcactgtgaaaactcatgaacc  24727900                                        --------->ZAT14                                    <---------ICU4                            <---------ANAC55(1)                                 <-----------GT1                            <---------ANAC58                                 <---------GLK1(1)                            <---------ANAC58                       --------->MYB46(3) --->MYB83                  <---------ANAC46                      -------->P --------->GLK1(1)  ----- --->MYB46(1)              <---------LBD16                --------->LBD16   --------->ARR11(3)  ----- >TEIL        ---------->DOF2--------->LBD16             <-----------RAV1(2)<---------ARR11(3)  -----   tatcgataaaactcacaaaagtattgttttccgtgaaatcactactgtctaagtctaatccaggtactaacctccaaagatttctccatttgctagacaa  24728000                                                        --------->ARR11(3)                                                        <---------GLK1(2)                                                      ----------->ARR10        <---------ATHB12                                                      --------->ICU4          --------->ANAC58                                <-------TEIL     --------->ANAC58             --------->ANAC58                               --------->CCA1(2) --------->ANAC58            --------->WOX13(1)    --                        --------->ETT(1)   <----------ID1             XXXXXXXXXXXXXXXXXXXX>MIR3440B-5P                      <xxxxxxxxxxxxxxxxsmallRNA(i)   xxxxxxxxxxxxxxxx>smallRNA(s)                 ---     <---------ZAT6<xxxxxxxxxxxxxxxxsmallRNA(i)---------->DOF2    --------->ARR14(2)           <----- ---->ANAC58      <----------DOF2       --------->ARR14(2)        <---------ARR14(2)       <---------At4g35610 ---->ANAC58   --------->ARR11(3)       --------->GLK1(2)--------->GLK1(2)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ---->ANAC46   <---------ARR11(3)       <---------ARR14(2)       <---------CCA1(2)     <-----------TGA1   gacactagtcttaacaacatcttttgtcggaagattcaagagaatatgacaaagcaaagattctggcaaatctcttagccaatcaacttcgtcatcagat  24728100             ------->MYC3             <-------MYC3            --------->O2            --------->ANAC55(2)            --------->ANAC58            <---------O2                                              <------MYB46(1)            --------->TGA1a                                           ----------->GT1            <---------ANAC55(2)                          --------->At4g35610            --------->ANAC58                  ---------->DOF2         <------MYB83    <---------REM1(1)       ----------->HVH21                   ------------>CBF          --------->MYB111(1)      --------->ANAC58                    --------->ANAC58  <------NtERF2       ---------->DOF2      --------->ANAC58                    --------->ANAC58 --------->RAP2.6(2)--------->ANAC58 --------------------->TaNAC69(2)    ------->TEIL     ---------->DOF2--------->MYB46(2)    <------ZmHOX2a(1) ------>ATHB12                 ------>ZmHOX2a(2) <-----------------------TaNAC69(2) <------ZmHOX2a(1) ----GLK1(2)=============================================bZIP_DOF   <--------P--------->ANAC58   tgtttggcacggacacgtttctctccgtcttgatccatgtaccttcgcaatagcgaagaagcggcaacgagtaggtgaaaacgaaaggatgtaggattaa  24728200                                                                <----------DOF2                                                      --------->AtMYB61                  <----------DOF2                    --------->MYB46(3)                         <----                  <---------DAG2                     <---------MYB55(2)     --------->TOE2(3)   <----         --------->ZAT6                            --------->ANAC46        <---------YAB1  <---------        ------------>CBF                         <---------MYB52(2)       <---------ARR11(3)    <----       ------>MYB46(1)                           --------->MYB46(3)       --------->ARR11(3)    -----       ------>MYB83--------->DOF5.7(2) --------->MYB52(1)    <---------DOF5.7(2)     <----------DOF2       --------->MYB52(1)            --------->ARR11(3)    <---------MYB52(1)     --------->GLK1(2)     <---------MYB59 <---------DOF5.7(2)    ----------->GT1--------->DOF5.7(2)   <---------GLK1(2) --   acccaaacctaacaataccactttaacgtcttcgtaagagataatggagtaacaaaccaccgttaacttttaaaattatcttagattctttttttgtggt  24728300                              --------->AHL20(2) -----ANAC58                  <---------AHL20(2)                     --------->ARR11(3) -----ANAC58                 --------->AHL20(2)         <----------DOF2 --RAV1(1)            ----------->GT1                <-----------GT1 <---------ARR11(3)         ----- -----ANAC46          <---------ANAC46          <---------YAB1    <-----------GT1        --------->YAB1 ---->ALFIN1    <---------AHL20(2)            --------->YAB1 <---------ANAC46         --------->WOX13(1) --------->GT1 --------->AHL20(2)           ----------->GT1 ---------->ID1          <---------YAB1 --   gtggaaattatctcagatttaatggagtatatttaataaacaaaattagtataattttctttttcgtttaacatcttgttttgtttattaatcaaaaaca  24728400                                       --------->AHL20(2)                                      --------->AHL20(2)                                  <---------AHL20(2)            ----------->GT1      --------->YAB1     --------->AHL20(2)         <---------YAB1     --------->YAB1           <---------AHL20(2)            <---------GLK1(2)  --------->YAB1             <---------AHL20(2) ----------->GT1                                  <--- <---------AHL20(2)       <---------AHL20(2)  ---------->DOF2                                    ---- ---->TOE2(3)      <-----------GT1--------->AHL20(2)     <---------TOE2(3)                       <--- ------->YAB1 <---------YAB1 --------->AHL20(2)--------->DAG2                   <---------TOE2(3)----   taaataataaaaatttgttattaactgtttatttattaaaataaaaaataaagttatttatggattttctaaaatcgaaactaagtttattttaaacaat  24728500                                                 --------->HSFB2a(2)           <-----------GT1                     <-----------------AGL1       --------->ATHB51                    --------->ARR11(3)       <--------HAHB4                      <---------ARR11(3)       <---------ICU4                      <---------GLK1(2)      <---------YAB1                   ---------->DOF2             ------>MYB46(1)      --------->ICU4              --------->AHL20(2)               ------>MYB83    --------->YAB1               <---------ARR11(3)           --------->CCA1(2)      <---------ARR14(2)   <---------YAB1                --------->ARR11(3)          <---------ARR11(3)      --------->ARR14(2)  <-----------GT1                <---------AHL20(1)   --------->ANAC58          <---------bZIP60(2) ------AHL20(1)                  --------->AHL20(1)   --------->ANAC58          <---------ANAC58 ----->AHL20(2)               --------->AHL20(2) <---------HSFB2a(2)            <---------ANAC46 ------AHL20(2)         <<<<<<<<<MYB98--------->AHL20(2)     --------->ARR11(3) <---------ANAC58 ----->AHL20(1)        ----------->GT1<---------AHL20(2) ---------->DOF2      <------ZmHOX2a(1)   aaattttcattattaactgtttatatgttaaaaaaaatatttaaagattttctaaaacggaaagataccaacgttttttaggacgtgtattctcaaacta  24728600  Previous    Next  AGI:  At1g66310.1    Description:  F-box family protein. Identical to FBD-associated F-box protein At1g66310 [Arabidopsis Thaliana] (GB:Q9C8Y6); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G66300.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 24726634    to: 24728138    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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