Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          ------>MYB46(1)      <---------MYB59   <-----------GT1                                      <---------ZAT18 ---------TOE1(2)                                --------->DAG2                                ------ ------ANAC46                                   ---------->DOF2                                ------ ------ANAC58    <---------At4g35610          --------->AtMYB61                                <----- ------ANAC58   <-----------GT1              --------->ANAC46                                 ------- --DOF2 ------>MYB83       <---------ZAT18 --------->REM1(1)<----------DOF2      --------->ANAC46   cgtagttaccaacttattttgctgtccaatgcacaacttgttcttacaccaaaagttgtgctctttaaacttgcatttattctacccaaaaaaaaaaaaa  24696200                                                                                                 ----                      <-----------GT1                                                        --------        --------->AHL20(2)                                                           --------->YAB1       <---------ARR11(3)                                                            <---------ICU4       <---------AHL20(1)          --------->ZAT6       <---------YAB1              <---------ATHB12<       --------->AHL20(1)--------->TOE2(3)         <---------ZAT6                 --------->WOX13(1)< --->AHL20(1)      --------->ARR11(3)        --------->YAB1                      <---------AHL20(2)<- --->AHL20(2)      <---------ARR11(3)       <---------ATHB12                     --------->AHL20(2)-- ----AHL20(2)      --------->AHL20(1)     --------->WOX13(1)             --------->ANAC46   <-------- -->AHL20(2)      --------->AHL20(2)     --------->MYB46(3)    --------->ZAT6   --------->AHL20(2) --   attgctcaatatatatacaaatatataccatagtttatcactaacaatcagtagtattatgtttcacactaatatactcaaaattaatcatcaaatcata  24696300   <---------YAB1 ----->AHL20(2) ->YAB1   <---------WOX13(1) ---------TOE2(3) ---------YAB1  --------->ANAC46 --------AHL20(2) ------->YAB1 --------->MYB46(3)             <----------DOF2 -ATHB12--------->ATHB12          <---------ICU4  ----------->RAV1(1) ------->AHL20(2)     ---------->DOF2   <----------DOF2          ----------->HVH21  <-----------HVH21   ttaatattagtgattaacaaacaacaaagaagctaattaagacttttctttcccacagtacaactctctgactgtgtaactcactctgtcaactacaaga  24696400                                                          --------->ORA47(1)                                                          <---------RAP2.6(3)                                                         --------->RAP2.6(2)                                                         --------->DEAR3(1)                                                 <-----------ARR10                         <---------WRKY18(1)    <---------CCA1(2)                     <----------DOF2                        --------->WRKY38(1)  <------ZmHOX2a(2)               ------>MYB46(1)                        --------->WRKY45    <---------ARR11(3)               ------>MYB83          <---------MYB52(1)        <---------ARR11(3) <---------At4g35610  --------->WOX13(1)         <-------GAMYB  --------->WRKY12    --------->ARR11(3)         <---------MYB52(1)     ------------>MYB.PH3(1)        --------->ARR11(3) --------->ZAT2  --------->DOF5.7(2)  ---------->DOF2     <----------DOF2 --------->TOE2(3)--------->At4g35610------------>CBF    <------   ttacaaaagaccgttagatttcatctttgaccatttgaaatcttaagatcaaatctcagccgtccattccaccgttaccaatctctctctttcgatataa  24696500                                                                        --------->ANAC55(1)                                                                        --------->ANAC58                                      --------->YAB1                    --------->ANAC58                                     <---------ATHB12     <-----------GT1                                   --------->WOX13(1)    *TSS         <---------ALFIN1                                 ------------>CBF       <-----------GT1 --------->ANAC46        <----              <----------DOF2------>ZmHOX2a(1) <-----------GT1      ------>MYB46(1)           <------ ---AHL20(2)  <---------DAG2 <----------DOF2 <----------DOF2        ------>MYB83          <----------DOF2   tcaacaaattttctaactttttctcggtgtcctttctcaatcagaagctttaccctattttctctatacctcccacgcaatttctctcattcctttcttt  24696600                           <---------TOE2(3)                               ------>ZmHOX2a(1)   <----- -------RAV1(1)     ---------->DOF2                             ------>ZmHOX2a(1)            -------- ----DOF2  --------->KAN4(2)                        <----------DOF2    <-----------GT1    --------->TOE2(3)   gtgggtttttgtttattcttcacaaagttaacatttttagactcaaaactcattcttttgcccttcctctgtttctcctctcttggggtttatcttagat  24696700                                                                                                 ----                                                                                <---------GLK1(2)----                                                                               <---------At4g35610                                                                          <---------ANAC58       <---                                                                      <---------ANAC58           ----                                                                      <---------ANAC58           <---                          <---------ANAC58                    <----------DOF2  --------->At4g35610  -     ---------->DOF2      <---------ANAC58              <----------DOF2   <---------ANAC58     <----- ----GLK1(2)         <---------AtLEC2                <------------------------ANAC81         ------>ZmHOX2a(1) --->ARR10       <----------DOF2                  <----------DOF2   --------->ARR11(3) ------>ZmHOX2a(1)   tctccaaaaaagtctctctctttccatggcttctcttctccatcttcttctcctttctctttctcttttagttcttgcttcagcttctccttctcctcca  24696800          ----------->ARR10                                                                   -------  <---------REM1(1)                                                                           <------ ----->ZAT2  --------->GLK1(2)                                                                <------ ----->At4g35610     <---------At4g35610                                                      ------- ------ZAT2 <---------GLK1(2)                              <----------DOF2                 <---------AtLEC2 ------->RAV1(2)    <---------ARR14(2)                    --------->YAB1                   <---------ANAC58 ------At4g35610    --------->ARR14(2)                    <---------ICU4                   <---------ANAC58 -------->At4g35610 ------->TEIL                     <-------TEIL   xxxxxxxxxxxxxxxx>smallRNA(i)    < ------RAV1(2)     <---------CCA1(2)   <----------DOF2   <---------ATHB12         <---------YAB1    <   gctgatgaaggtgagattcttgtatctgattcaatcttgtactttgagtttcagattcaatctttactcccaaatttgaaagttttgatttttgcatgtg  24696900                     --------->HSFB2a(1)    -------->HAHB4                                    <------               >>>>>>>>>MYB2                <---------ICU4                                  --------- >MYC3   <---------HSFB2a(2)                <--------ATHB1                                 --------->AHL20(2) -MYC2   --------->HSFC1(1)                <---------ATHB51                            --------->AHL20(2) -MYC3   <---------HSFC1(1)                <---------YAB1         --------->YAB1     ----------->GT1 >MYC2   --------->HSFB2a(2)               --------->ICU4       <---------TOE2(3)   --------->DAG2 -- ---------TOE2(3)  ------>MYB46(1)       --------->YAB1      <---------YAB1        ---------->DOF2 -- ---------TOE1(3)  ------>MYB83       ----------->GT1<-----------HVH21     <----------DOF2 <---------AHL20(2)   ttaatgttcttctagaaaaccaaatgttccattttttatgtagtaataattccactgtcagtgattaatgaaaatagctttaatataaagtaattaaaga  24697000                                                                                                 <---                                                                                                 <---                                                                                               ------                                                               --------->YAB1                  <-----                                                              <---------YAB1                  <------                                                         <------MYB83                         <------                                                         <------MYB46(1)                      -------                                                        <---------TOE1(2)                    --------                                                        --------->MYB111(1)                  <-------                                                        --------->MYB59                      --------                                                       <--------P<---------YAB1              <-------    <----------DOF2                                 <---------AtMYB61                        <------MYB46(1)    ------>ZmHOX2a(1)                              <---------ZAT14                           <------MYB83 ----ID1                       --------->ATHB12    --------->ZAT18   <---------AHL20(2)     --------- ->DOF2       ------->TEIL    <-------TEIL        --------->ALFIN1--------->YAB1            <-------- ------->ANAC58  --------->ALFIN1       <---------YAB1 <---------MYB55(1)                   --------- ------->ANAC58  <-----------RAV1(1)<---------ANAC46--------->ALFIN1<---------YAB1         <---------   caagtccttttgtatgtatgtgttggatttgattcattgagtatgtttgagagtgtggtaggttatgataataaatgtcagtatgtgtgtttggcaggtg  24697100  Previous    Next  AGI:  At1g66250.1    Description:  glycosyl hydrolase family 17 protein. Identical to Putative glucan endo-1,3-beta-glucosidase 2 precursor [Arabidopsis Thaliana] (GB:Q9C7U5); similar to glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative [Arabidopsis thaliana] (TAIR:AT2G01630.1); similar to Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] (GB:ABN08070.1); similar to beta-1,3-glucanase [Camellia sinensis] (GB:AAK85402.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO44755.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain X8 (InterPro:IPR012946); Range:  from: 24696557    to: 24699178    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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