Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->ANAC58                                             --------->ANAC58      --------->ICU4                         --------->ANAC46    <---------TOE1(2)                       --------->LBD16<---------ANAC46 <---------ANAC58                 <---------ANAC58         <---------ANAC58 --------->ANAC55(2)              <---------ANAC58    <---------YAB1 <---------ANAC55(2)         <---------ANAC55(2)    --------->YAB1 <---------ANAC46            --------->ANAC55(2)   ----------->GT1 ---------->DOF2 <---------ANAC58     ----------->GT1   ------>ZmHOX2a(2)  <---------ANAC58                    ------   gtttcgtaagtatcaagaagacgagagtaatacgtttcttgatccccacgaaattgataattcgtgtaccaaagcggagacttagtagaagaaaccctat  24657200                                                        <---------ANAC58                                                        <---------ANAC46                                          <---------ANAC58                           <------ZmHOX2a(2)            <---------ANAC58                          <---------ARR11(3)          <---------At5g28300                          --------->ARR11(3)     ------>ZmHOX2a(2)                         --------->TOE2(3)                          <---------ARR14(2)   --------->ARR11(3)               --------->ZAT14                         ===============================HOX2a_HOX2a             <---------ZAT18  ------>NtERF2          <------ZmHOX2a(1)<---------ANAC58                 <----------DOF2--------->REM1(1) --->ARR14(2)--------->ARR14(2)           <---------ANAC46   <---------AtMYB61  --------->ZAT18   tctcggccaaaaccctattctcagagaggatcatgttcttcgtggcttcgatcttgtaccgtgaaggtcgaggtattctttgtgctctcgttacatcaaa  24657300                                                  <------NtERF2                                                 <---------ATERF1(1)                                                 ------>NtERF2                                                <---------ALFIN1                                                --------->RAP2.3(3)                                                --------->RRTF1(2)                                                --------->DREB2C(2)                                                --------->RAP2.3(2)                                                --------->RRTF1(3)                                                --------->RAP2.6(2)                                               <------NtERF2                                               --------->RRTF1(1)                                               --------->DEAR4(2)                                               --------->RAP2.6(1)                                               --------->ATERF1(1)                                               --------->ORA47(2)                                               --------->ERF1                                               --------->RAP2.3(1)                                              <---------DEAR4(2)                                              ------>NtERF2                                              --------->ABI4(1)                                              <---------ATERF1(1)                                              <---------DREB2C(1)                                              --------->At4g35610                                              <---------RAP2.3(1)                                              <---------At4g35610                                             --------->ANAC46                                             --------->RAP2.3(3)                                             --------->DEAR3(1)                                             <---------DEAR3(1)                                            --------->ORA47(2)                                            --------->ERF1                                            --------->DEAR4(2)                                           ------>NtERF2                                           <---------ATERF1(1)                                          <---------TGA1a                                          --------->ANAC46                                          <---------ALFIN1                                          --------->bZIP60(2)                                          --------->ANAC58                                          <---------O2                                        <---------ALFIN1                                        <---------ATERF1(1)                                    --------->ANAC58     <---------ALFIN1                                    ------>MYB46(1)      --------->AtMYB61                           <---------MYB52(1)--------->RAP2.3(2)                          --------->LBD16 --------->ANAC58                         <---------ANAC58 --------->TGA1a--------->DEAR3(1)                         <---------ANAC55(2)--------->RRTF1(1)                         ----------->RAV1(1)                         <---------ANAC58 --------->O2  --------->MYB46(3)            <---------ALFIN1                         --------->HSFB2a(2)--------->ATERF1(1)                     ------>ZmHOX2a(1)                         <---------HSFB2a(2)--------->RAP2.6(1)                  ------>ZmHOX2a(1)                         --------->ANAC55(2)--------->RAP2.3(1)                 <---------ALFIN1            <---------MYB52(1)      --------->ANAC58  --------->REM1(1)       ------>ZmHOX2a(1)    <-     <---------YAB1  ===============================bZIP_DOF                 <---------ALFIN1      --   --------->YAB1    <----------DOF2------>MYB83--------->DEAR3(1)         ------>ZmHOX2a(1)      <--   ctctctcataatcggtttgccttctttccgtaagtaccaagcccacgccgccgccttcaccaccgctaaatcatctcctcctcctcctccaccataaacc  24657400         <---------ARR14(2)                                       ----------->GT1         --------->ARR14(2)                                       <------MYB83        <---------CCA1(2)                                         <------MYB46(1)        <---------MYB52(1)                                       <---------AtMYB61     <---------TOE1(2)                                    ----------->HVH21  --------->DEAR3(1)                                     --------->HSFB2a(2) --------ICU4         ------>ZmHOX2a(1)                  <---------HSFB2a(2) ------->YAB1      ------>ZmHOX2a(1) <---------MYB46(3)  --------->LBD16          <---------MYB46(3) -------YAB1 <<<<<<<<<TBF1    <---------TOE2(3)         --------->ANAC46          --------->MYB111(1)   atcatcgcccgtttcttcttcctcctcttgtttacgttgttgttgatagcattcttctccgagacggatggtgaagaaatgtagtagttggcaaatggga  24657500                                                                                                  ---                                                                                              <------                                                                                            <--------                                                                                            <--------                                                                                   <---------AHL20(2)                                                                                  <---------ARR11(3)                                                                                  --------->AHL20(1)                                                                                  <---------AHL20(1)                                    ----------->GT1                      <---------WOX13(1) ---------                    <---------AHL20(2)                                 --------->ATHB12     <--------                   --------->AHL20(2)                                 <---------YAB1        <--------                   <---------AHL20(1)           <---------ANAC46 <------ZmHOX2a(1)--------->AHL20(2)                   --------->AHL20(1)--------->TOE1(3)         <---------TOE2(3)  <---------AHL20(2)            <---------ZAT6         <---------TOE2(3)           <---------TOE1(3)  --------->ARR11(3)<            ----------->GT1     --------->CCA1(2)        --------->DAG2-------->HAHB4  <---------AHL20(2)   <---------ANAC46<---------AHL20(2)--------->TOE2(3) ---------->DOF2--------->ICU4   --------->AHL20(2)   gcattgtgggaatagagtaaataaaatttgtgagataaacgttaatagtggcgaagggaaaggctaaggaaaatgattgaagaatatatttatttcgtat  24657600                                                                       ------------>CBF                                                                     --------->ANAC46                                                                     --------->ANAC58                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                                                             ------>MYB83--------->WOX13(1)                                                             ------>MYB46(1)>>>>>>>>>RAP2.2 *TSS  ----------->GT1                                       --------->MYB52(1)  <---------ATHB51 ------->DOF2                                              --------->MYB46(3)    --------->AHL20(2) ---------AGL15                    --------->ALFIN1        --------->AtMYB61--------->TOE2(3) -ANAC58                           <-----------RAV1(1)     <---------MYB55(2)    <---------AHL20(2) -ANAC46                       <------MYB83               --------->ANAC46  --------->YAB1 >ANAC55(2)                    <------MYB46(1) <----------DOF2    --------->ARR11(1) -ANAC58  ---------->DOF2     --------->MYB111(2)      <-------TEIL--------->CCA1(2) -ANAC55(2) ----------->GT1   --------->MYB111(1)  <---------TOE1(3) --------->ANAC58    --------->AtLEC2 ---------TOE2(3)    ---------->DOF2<-------GAMYB  <---------TOE2(3)--------->SPL7<---------ICU4   taaaggaaatagtaaagaaaaatgaaagtaagtaggtgtgttggccttactttaaggtccaccaaatggatacggcaatctaaataattccatggagaaa  24657700                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                        ------->TEIL        <---------ANAC55(2)                          --------->ARR14(2)         <---------ANAC55(2)    --------->ANAC55(2)                          <---------ARR14(2)         --------->ANAC55(2) <---------ARR14(2)                     <-------GAMYB                  <---------TOE2(2)    --------->ARR14(2)         -                    <---------MYB46(3)              <---------TOE1(2)  --------->LBD16              <                    --------->MYB55(2)             ------>ZmHOX2a(1)  <---------ANAC55(2)        ----                    --------->MYB52(2)            --------->TOE1(2)   <---------ANAC46           ----                    --------->MYB111(1)           --------->TOE2(2)--------->PCF5 --------->TOE2(3)--                    --------->MYB46(2)      <---------ANAC58       <---------ARR14(2)    <---------ANAC58                    --------->MYB111(2)     <---------ANAC58   --------->At4g35610--------->ANAC55(2)                  <---------MYB52(1)  --------------------->WRI1  <-----------HVH21      <---------ANAC58   atgtttttttatatttctgtgttagttggatttggaattgcatagtgcttatcctacgtatcaccagcggtcccgtatacgtatacttaattcgtgcatt  24657800        --------->YAB1                                <---------TOE2(3)                <-------TEIL       <---------ATHB12                               <---------YAB1                  --------->GLK1(2)       --------->AHL20(2)                          <---------ARR14(2)           <-------TEIL  --------->TOE2(3)                                --------->GLK1(2)   --------->AHL20(1) -------->ARR11(3)                                 --------->ARR14(2)  --------->AHL20(2) ---------ARR11(3)                      --------->ZAT18                <---------AHL20(2) ----->YAB1                             --------->ZAT14     ----------->HVH21  --------->CCA1(2) ----->AHL20(2)                         <---------ZAT14   <---------MYB46(3)--------->MYB59 ------->RVE1(1)            ------>ZmHOX2a(1)  --------->HSFB2a(2)    --------->AHL20(2)      <------   aatatctcaataaatatgggactacaagtccttgttatggactggactacgagaatatggttgtgacagaaaaaaaattagatacaagattcagtttttc  24657900                                  --------->YAB1                                 <---------YAB1                          <----------DOF2                      <----------DOF2                      --------->ARR11(3)                     ------->TEIL                      <---------GLK1(2)                   --------->ANAC46                      <---------ARR11(3)                  --------->ANAC58           ---------->DOF2                    ----------->ARR10                     --------->ANAC58        <---------ZAT6     <---------AHL20(2)--------->GLK1(2)               --------->MYB46(3)       <---------ANAC46 -----GT1<---------AHL20(2)   <---------YAB1         <-----------GT1    <---------ALFIN1  <----------DOF2   caaatttttaattcattttgaaaagattctttgttattatagtatgtggaagaagtaaccacgcactttcttctccaccttgaagtgtaaagcttttggt  24658000                                                                                             --------                                                                                             <-------                                                                                             <-------                                         <---------AHL20(2)                                  --------                                       <---------YAB1                                    <------ZmHOX2a(1)                                      <---------AHL20(2)                               <---------TOE2(3)                                    <---------AHL20(2)                              >>>>>>>>>>GATA-4                                 <---------AHL20(2)                                 >>>>>>>>>>GATA-2                                 --------->AHL20(2)                                 >>>>>>>>>>GATA-3                                 --------->AHL20(1)                                 >>>>>>>>>>GATA-1                                 <---------AHL20(1)                     <-----------RAV1(1) ---------              ----------->TGA1  --------->AHL20(2)                     ------->TEIL--------->YAB1        ----------->TGA1        --------->YAB1                    --------->At4g35610  --------->ANAC58  ----------->HVH21            <---------ATHB12                   <---------At4g35610  --------->ANAC58  ----------->TGA1         ----------------->AGL3             <---------ANAC46    <---------YAB1<----   ttcgatgacgatgacgatgacgatgactatccaattatattattttaagtcaacaaggcttattgtggagatgaatgttgttgtatgataaggaattatt  24658100  Previous    Next  AGI:  At1g66190.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G37550.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75247.1) Range:  from: 24656458    to: 24657601    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version