Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------ATHB12                                                                  ----------->HVH21 --------->ARR14(2)                                                                 <---------AHL20(1) <---------ARR14(2)                    <----------ID1                      ----------->GT1 ---------GLK1(1)              ----------->GT1                 ----------->HVH21 --------->AHL20(2) -------->GLK1(1)          --------->DAG2   --------->DAG2    <---------ANAC46   --------->YAB1 ------TOE2(3)            ---------->DOF2  ---------->DOF2   --------->At4g35610<---------ATHB12    < ------AGL15          <----------ID1 ---------->DOF2         <---------At4g35610<---------ATHB51  ---   gggtatccaatgtttttgagcaaaacgaaaaagaggtaaaaaagaaaaagttgaaacttaagttgctgacacataaatggcaataatatatgtgacccat  24625300           ---------->DOF2                                                         <---------AHL20(2)         <---------AHL20(2)                                                        --------->AHL20(2)        --------->AHL20(2)                        --------->YAB1                  <---------ATHB12        <---------AHL20(2)                       <---------YAB1                 --------->WOX13(1) ---------CCA1(2)                   <---------MYB46(3)                      ----------->GT1 ------>YAB1              --------->AtLEC2     --------->YAB1        ---------->DOF2   tcatatctaatttaaaagttatacaaccatgctaacaattgttgatcaaacatcataacttcaaatattgagaaagaattgtcaattaatccaagaacat  24625400                                                            --------------->AGL15                                                            --------->TOE1(3)                                                            --------->TOE2(3)                                                            <---------------AGL15                                                           ----------------->AGL3                                                           <-----------------AGL3                                                           ----------------->AG                                                           ----------------->AGL2                                                         <---------CCA1(2)                                                       --------->YAB1                                                      <-------TEIL                            >>>>>>>>>MYB2          <---------KAN4(1)                     ---------->DOF2  ---------->DOF2 --------------->AtSPL8                <---------GLK1(1) ---------->DOF2  --------->KAN4(1)     <------ZmHOX2a(1)  <--------                --------->GLK1(1)<---------ATHB12 <---------KAN4(2)    --------->MYB59      <--------   agaaattgagagtcttagatttccaaagaaaaccaataaagaaagatgaaagaatattcataccttatatagttaggatgatgaagagaccaaggcttgg  24625500                              --------->CCA1(2)                             <---------ARR14(2)                                               <------                             <---------GLK1(2)                           ---------->DOF2    --------- -ANAC58              <---------YAB1         ------>ZmHOX2a(2)       ---------->DOF2       <---------ARR11(3) -ANAC58     --------->ALFIN1--------->ARR14(2)              <---------ZAT18               --------->ARR11(3)   gatttgagagaagaagtgggagttatgaacagatttgagtccatcgatctcgaggttattttggggacttaaaaagaaagagaagaagtgagagatatga  24625600                      <---------YAB1         --------->At4g35610                <---------AHL20(2)  <------MYB83  ---------->DOF2                 <---------At4g35610             ----------->GT1        <------MYB46(1)     <------ZmHOX2a(1)    <---------ZAT6   <------ ---YAB1    <---------ZAT6<---------ZAT6     --------->ZAT18             <---------ZAT14   <---------AHL20(2) >CCA1(2)   ----------->GT1    <---------YAB1<---------At4g35610   *TSS  --------->ZAT14   --------->AHL20(2)   gagagagacagagagagttaaattgtgagtgttatgtttggtttgggagcacaaaagaggagagagtggaatgtgtatagtgtaagatgatgttttatta  24625700                                                --------->TGA1a                                                <---------O2                                                <---------bZIP60(2)                                    ------------>CBF                                   <<<<<<<<<<<<<<<<<LFY            ==============================================MYC_MYB            <--------P            --------->ZAT18   ----------->HVH21         <---------TOE2(3)     <---------ANAC46 --------->O2   --------->DAG2            <---------ZAT14    <---------TGA1a                                    <-  ---------->DOF2     --------->ALFIN1     --------->ALFIN1                                     <---- ---YAB1 <---------TOE1(3)  --------->ALFIN1 ----------->HVH21                        <---------LBD16   tgggaaaagctaaggttgctgtgagtgggagtggaggggacaatggtgggacgtctcacacttaagtcagaccacagttttttttttcttcggataattt  24625800                                                                                  --------->AHL20(2)                                                                       <---------ICU4                                                                       --------->YAB1                                                                       <--------ATHB1                                                                       -------->HAHB4                                                                       --------->ATHB51--------->AHL20(2)                          <---------ANAC55(2)                          <--------HAHB4  <---------AHL20(2)                        <---------ICU4                                --------->ICU4  --------->AHL20(2)                     --------->YAB1                                   <---------ATHB51--------->YAB1          --------->AHL20(2)                                          <---------YAB1  <---------AHL20(2)         --------->YAB1 --------->YAB1                                --------->AHL20(2)<---------YAB1         --------->AHL20(2)                                         --------->YAB1<---------AHL20(2) ---------DOF2      <---------AHL20(2)                          <-------TEIL --------------->AGL15 -------GT1    <-------TEIL           <---------MYB46(3)  <---------LBD16 <-----------GT1         ---   tctttatctaataaaaatacatataatcatgtaagtgtgatggttcaattggtttcatactcagggtccataataattactctattaattaaaattcagt  24625900                                                                    ------>ZmHOX2a(2)                                                                   <---------At4g35610                                                                   --------->At4g35610                                                         <---------ZAT6                                                   <----------DOF2 <------ZmHOX2a(2)                                                  <---------ANAC46<-----------ARR10                          ------>NtERF2           <---------ANAC58<---------ARR14(2)                         <---------PCF2      <---------REM1(1)    --------->ARR14(2)               --                        <---------RAP2.6(2)  <-----------RAV1(1) <---------CCA1(2)                 <-                      --------->ALFIN1      --------->ARR11(3)   <---------ARR14(1)            <-----     ---------->DOF2 <-------PIF5       <---------MYB52(1) <---------YAB1                  --------->ATHB12 ------->DOF2        ------->PIF5 <-----------GT1 <---------ANAC58<---------AGP1   <---------TOE2(3)   taaaggtgaaagttggcagtgcaagtgcggccaattgaaccagttagatgttgcttttagtattatcggatctgagttcaaatctaagataaatgattta  24626000             <-----------GT1         <---------AHL20(2)                                                                        --       ------->TEIL                                                                    --------->YAB1 ------->ARR11(3)                   <------MYB83            ---------->DOF2           <---------YAB1- --------ARR11(3)                   <------MYB46(1)  <------ZmHOX2a(1)         ----------------->AGL1 ----AHL20(2)--------->YAB1   ---------->DOF2    ---------->DOF2            --------->GLK1(1)--------   aaatctatgaatttatcacaatttgttttgtcaaaagttggtattcaactaaaaaggattacaaaagaaaaatttggaatttccagttatgaaaatggca  24626100                                                                                          -----------                                  <-----------GT1                                  <---------AHL20(2)                              --------->ATHB12                                     --------->AHL20(2)                              <--------HAHB4                                 <---------RVE1(1)                             <---------ATHB12    --------->WOX13(1)         <---------GLK1(2)     ----------->GT1        ------->TEIL      ------->TEIL                  <---------ARR11(3) -------->DOF2   <---------ARR14(2)   --------->ARR11(3)                    --------->ARR11(3)------- -------->DAG2   --------->ARR14(2)   <---------ARR11(3)                  <---------TOE2(3)  -------- --->GT1  --------->ICU4 <---------YAB1<------ZmHOX2a(2)      --------->ANAC46 <---------AHL20(2) ---   aaaaagttagtaatattcaaatccagtatgaatcatttacgatctatgaatccatcacgaatacaaaccaaaaatttagatttttttaaatattgtaaag  24626200  Previous    Next  AGI:  At1g66140.1    Description:  ZFP4 (ZINC FINGER PROTEIN 4); nucleic acid binding / transcription factor/ zinc ion binding. Identical to Zinc finger protein 4 (ZFP4) [Arabidopsis Thaliana] (GB:Q39263;GB:Q9C8D2); similar to ZFP7 (ZINC FINGER PROTEIN 7), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G24625.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45049.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74885.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 24623500    to: 24625667    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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