Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <-----------HVH21                                                                          <---------YAB1                                                                        --------->YAB1              -                                                                       <---------ATHB12            <-                                                                       <---------YAB1             ---                                 --------->HSFB2a(2)                   --------->ICU4             ---                     ----------->HVH21          <---------ANAC58   <---------RAP2.6(3)           ----                     ------>ZmHOX2a(1)          <---------ANAC58  --------->ANAC55(2)          ------                   <---------At4g35610        <---------YAB1      <---------ANAC55(2)         -------   --------->DAG2  ----------->RAV1(2) --------->TOE2(3)          --------->RAP2.6(2)         -------  ---------->DOF2<-----------GT1 <---------HSFB2a(2)              <---------ANAC46      ----------->RAV1(2)   tcccaaaagttgtatgtattctcctgacccatcttctacaaacttaacatgcttgttctcagagcatgccgtaatcataaatgggtcatcccctgcaacc  24576700     --------->ATHB12 -------->YAB1 --------ATHB12          <---------TOE2(3) --->MYB46(1)           <-----------GT1             --------->ANAC46 --->MYB83<---------ANAC58                       --------->ARR14(2) ----->WOX13(1)       --------->AHL20(2)         --------->ZAT14       <------ZmHOX2a(2) --->MYB46(3)         <---------AHL20(2)  <---------HSFB2a(2)         <---------ARR11(3)      <------ -->ANAC58<---------ANAC58             --------->GLK1(1)       --------->YAB1              <---------ICU4 -->ANAC58<---------ANAC46             <---------GLK1(1)      <---------YAB1            --------->YAB1   aatcaaaccattgcgtcaatacaattaaacgttttgatcagatttcagaagtatacacaaactcatcatagagatcaaaaacatatcaattcatagttac  24576800             ===================================HOX2a_HOX2a             ------>ZmHOX2a(2)           <---------ARR11(3)           --------->ARR11(3)                         <---------ATHB12   --------->ANAC58                           <----------DOF2   --------->ANAC58                 <---------At4g35610                    --------->AtLEC2--------->ANAC58 ---------->DOF2     --------->ANAC46    ------>ZmHOX2a(1)    --------->AtLEC2    --------->TOE2(3) -----GT1<---------ATHB12           --------->At4g35610  ------->TEIL   <-------TEIL       --------->ANAC58   cacttaagcaaatgatctcatcaacaccatttgatttgagctcctctgctttctcaatgaatccattcacatggttcatgctaacctcataacaagaaaa  24576900                                            --------->YAB1                                            <------ZmHOX2a(1)                                      --                                  --------->AHL20(2)                                              ---                                  <---------AHL20(2)                                              <--                                --------->YAB1                                                    <--                              <---------AHL20(2)                                                 <---                              --------->AHL20(2)   --------->YAB1                             <------                             --------->YAB1----------->GT1                                   --------                      <---------ARR11(3)  <---------TOE1(3)                                ----------                     <---------ALFIN1     <---------TOE2(3)                    <---------AtLEC2 -----                     <---------CCA1(2) <---------AHL20(2)                 ------->TEIL<------ZmHOX2a(1)                   <---------ALFIN1--------->AHL20(2)                 --------------->AtSPL8 --------   cacaattctcaaatccaaaacccacatcttataaaaataattttaaggataaatcagaaaacgttttgaaactttgtacctgcatgtaggagggaaagca  24577000                                  <---------ANAC46                                 <------NtERF2                                 --------->ATERF1(1)                                ------>NtERF2                                <---------ATERF1(1)                                <---------ERF1                                <---------RAP2.3(1)                                <---------DEAR4(2)        ---------->DOF2        <---------RAP2.3(3)      --------->ANAC58         <---------ATERF1(2)  ------>NtERF2                <---------DEAR3(1)                                                  --  <---------ATERF1(1)          --------->DEAR3(1)                                                  -- ----------->HVH21             --------->ATERF1(2)                                               ==== ------->LBD16                 <---------RAP2.3(2)                                               <--- ------>DEAR3(1)              <---------ABI4(1)                                                <----- -------LBD16                 --------->ATERF1(1)                                              <----- -------ANAC46              <---------ATERF1(2)                                               <------ ------LBD16                --------->ATERF1(2)                                               <------ ---ABI4(2)                --------->DEAR3(2)                                            --------->HSFC1(2) ->ANAC58                 --------->MYB52(1)--------->MYB52(1)         <-----------TGA1--------->ARR11(3) >DOF2--------->ANAC58 <---------ANAC58    --------->ZAT14             <-----------HVH21 <---------HSFC1(2) ---->MYB52(1)         <---------ANAC58    <---------ZAT14         --------->YAB1      <---------ARR11(3) ->ANAC58           <----------DOF2        --------->ZAT18        <---------YAB1 ---------->DOF2<----   ccggggacaccaaagagtatgactttcttaccggcggcgagagagtgaacggagacagtctgaagttgatcatcgtcatcgaagaaagagatacttccgt  24577100             ----------->RAV1(1)       <---------ARR11(3)       --------->ARR11(3)      <---------GLK1(2)  <-------TEIL ------->At4g35610 --------->GT1                                                                                     <- ========================RAV                                                                       <- --------RAV1(2)                                                                              <------ ------HVH21 ------>NtERF2                                                                 --------->WOX13(1) ------TGA1 --------->ANAC46                       --------->CCA1(2)                      ----------- ---ANAC58  ----------->HVH21               ---------->DOF2                              ------------ ---ANAC58  <---------ETT(1)             --------->ANAC58                                <----------- -----MYB52(1)                           --------->ANAC58           <----------DOF2      ------------   caggtacaaaatctccgacatcaattggagccatgaggctgagaagcaaagagatttgaagagttttggactttgagggaaaatgaaattagccaattag  24577200                                                                       <---------AHL20(2)                                                                       <-----------TBP                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)                                                                   <-----------TBP                                                                   --------->AHL20(2)                                                                   <---------AHL20(2)                                                                 <-----------TBP                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)                                                             <---------AHL20(2)<---------AHL20(2)                                                             --------->AHL20(2)<-----------TBP                                                           <---------AHL20(2)<---------AHL20(2)                        <---------YAB1                     <-----------TBP <-----------TBP                        <---------AHL20(2)               --------->AHL20(2)--------->AHL20(2)                        --------->AHL20(2)               <---------AHL20(2)<---------AHL20(2)                     --------->AHL20(1)                  <-----------TBP --------->AHL20(2)                     <---------ARR11(3)                <---------AHL20(2)<-----------TBP                     --------->ARR11(3)                --------->AHL20(2)<---------AHL20(2)   ------- --------ANAC58      <---------AHL20(2)     --------->ARR11(3) <-----------TBP --------->AHL20(2) --------ANAC58      --------->AHL20(2)     <---------ARR11(3) <---------AHL20(2)       ----------->GT1 ---ICU4<---------ARR14(2)    <---------ANAC55(2)    <-----------TBP <-----------TBP ---------->DOF2 ---->AGL15          <---------AHL20(1)   <---------AHL20(2) <-----------TBP --------->AHL20(2) >CBF   --------->ARR14(2) <---------YAB1--------->AHL20(2)--------->AHL20(2)<-----------TBP  <------ ------AGL2        ------->TEIL     --------->AHL20(2) <-----------TBP --------->AHL20(2)  --------->AHL20(2) ----->AG       <---------YAB1----------->GT1--------->RVE1(1) --------->AHL20(2)  <---------AHL20(2)   ggcttgagagtattttctatgaatatattattatgtaaaaatataaaatctctgtatatatatatatatatatatatatatatatataaaagataaaatc  24577300                                                                                                 ----                                                                                                 <---        --------->AHL20(2)                                                                      <----        <---------AHL20(2)                                     --------->AHL20(2)               -----  --------->ANAC46                              <---------AHL20(2)                              <----  --------->ANAC58                             --------->AHL20(2)                --------->AHL20(1)  --------->ANAC58                        --------->TOE1(3)    <---------AHL20(2)<---------AHL20(1) -->ARR11(3)                              --------->TOE2(3)   --------->YAB1     <---------AHL20(2) - ---ARR11(3)------------>CBF    <----------DOF2<---------AHL20(2) <---------TOE2(3)       -----------   tttcaagaaataaaatcaatttgattttagtcttctttagaaaaccttattaattttgtagtaattttaatgaaattttctaaaatatttgatggtaatt  24577400                                                           ----------->GT1                                                       <---------AHL20(1)                                                       --------->AHL20(1)   <---------YAB1                                      <---------AHL20(2) <---------AHL20(2)                                    --------->AHL20(2) --------->ATHB51                                  --------->AHL20(2)                             --- <---------ICU4                                    <---------AHL20(2)                             <-- --------->AHL20(2)      <---------AHL20(2)       --------->AHL20(2)                          <------ ----->AHL20(2)          --------->AHL20(2)    <---------AHL20(2)                         <---------AHL20(2) ------AHL20(2)       --------->GLK1(2)       --------->AHL20(2)                         --------->AHL20(2) -----AHL20(1)   ----------->GT1              <---------ARR11(3)                         <---------AHL20(2) ---->AHL20(2)  --------->ALFIN1              <---------AHL20(2)                         <---------AHL20(1) -----AHL20(2)--------->ALFIN1                --------->ARR11(3)                         --------->AHL20(1) -------->ICU4<---------ANAC46                <---------AHL20(1)                         <---------ARR11(3) >GT1        --------->ALFIN1                 --------->AHL20(1) ---------->DOF2         --------->ARR11(3)   taattatttttgggaggggtggagaatttaaatatgctgtttttgaaatatatttaataaattgtaaaaaagaaatatgctgtttttgaaatatatttta  24577500                                                  ----------->HVH21                                                --------->At4g35610                                                <---------At4g35610                                            ----------->RAV1(1)                                   ---                                       <---------ANAC58                                           <--                                       <---------ANAC46                                       <------   --------->YAB1                      <---------ANAC58      <---------AHL20(2)              <-------  <-------TEIL                  <---------YAB1--------->MYB46(3)  ---------->DOF2            -------- ------>ARR11(3)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------->AHL20(2)     <----------DOF2-- -------AHL20(1)      --------->ANAC46<-----------------------TaNAC69(2)            --------------->AGL15 ---AHL20(2)      <-----------GT1<-----------RAV1(1)     --------->AHL20(2)         =================   tatattcatcaaatttgataatacacttcatcttattgttggcttgcaacagatgacaactaattaaacaaagaacagataagcttctttttttataaat  24577600  Previous    Next  AGI:  At1g65990.1    Description:  type 2 peroxiredoxin-related / thiol specific antioxidant / mal allergen family protein. Identical to Peroxiredoxin-2A (PRXIIA) [Arabidopsis Thaliana] (GB:Q7G959); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G10740.1); similar to type 2 peroxiredoxin [Brassica rapa subsp. pekinensis] (GB:AAD33602.1); contains InterPro domain Redoxin; (InterPro:IPR013740); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain F-box associated type 1 (InterPro:IPR006527); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 24575266    to: 24577134    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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