Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->ARR14(2)                                      <---------ARR14(2)                                     ------->TEIL                                      --------->GLK1(2)                           --------->TOE2(3) <   ---------->DOF2               --------->ANAC46                      --------->ANAC46   --------->ANAC58 ------>HVH21    ----------->GT1 --------->ANAC58         <---------ICU4     --------->AtMYB61      - -----ATHB12--------->YAB1       --------->ANAC58      --------->YAB1  --------->AtLEC2   --------->ANAC58   gacgaataagccgattagaatgtaattcaaactacaagaaaatcggcctaatgccattgataactacaattccatgaaaccaaaacttaaacacgaatgt  24554400                                                  <---------At4g35610                                               <---------At4g35610                                              --------->ARR14(2)             <---------ALFIN1                 --------->GLK1(2)            <---------ZAT18                   <---------ARR14(2)        --------------->AtSPL8               <---------GLK1(2)        <---------------AtSPL8    <---------GLK1(2)     <---------AHL20(2)           --------->ARR11(3)                                                -   <---------ANAC55(2)            --------->ARR14(2)             ---------->DOF2                  <--   --------->ANAC55(2)            <---------ARR11(3)          --------->ANAC46                    --- --------->CCA1(2)                <---------ARR14(2)          --------->ANAC58       ----------->RAV1(1) ---------ARR11(3)              ----------->ARR10 --------->At4g35610               ----------->HVH21 -------->ARR11(3)   <---------MYB52(1)  --------->At4g35610  --------->ANAC58     --------->At4g35610   aagatatgtaattgtacacctctgttaatctctgaagatactcatcggaatctgctggtaatctacgcaaagtatacttgtaatcagcgacagtgagagt  24554500                                                                                 --------->MYB52(1)                                                                              <-------TEIL                                                                             --------->ARR14(1)                                                                             --------->CCA1(2)                                                                            --------->ARR14(2)                                                                            --------->ARR11(1)                                                                            <---------ARR14(2)                                                                            --------->TOE1(2)                                                                          ----------->ARR10                                                 ----------->GT1      <---------TOE2(3)                                             <---------ARR14(2)       --------->ANAC58                                             --------->ARR14(2)       --------->ANAC58 ----->ZmHOX2a(2)         <---------ATHB12  <------ZmHOX2a(1)       --------->CCA1(2) -------ARR11(3)      <-------TEIL        <---------TOE2(3)       --------->CCA1(2)            <----- ------>ARR11(3)     --------->GLK1(2)  --------->ICU4  <---------ATHB12<------ZmHOX2a(1)      <-----   gatctacaagtagagaataagagattcaatgaatgaattggaatgaggaaatggtgaaatcaatagagagataaggaagatacgaacggagtagatagcg  24554600                                                                                             <-------                                                                              --------->RAP2.3(1)                                                                              <------NtERF2 ---------                                                                              --------->ATERF1(1)                                                                             <---------At4g35610                                                                             --------->At4g35610                                                                             <---------ATERF1(1)                                                                            <---------DEAR3(1)                                                                           <------NtERF2    <--------                                                                           --------->ATERF1(1)                                                                          --------->ABI4(2) <--------                                                                          ------>NtERF2 <---------RAP2.3(2)                                                                          <---------ATERF1(1)<-------GAMYB                                                                          <---------ERF1<---------bZIP60(1)                                                                         <---------DEAR3(1)<---------DEAR3(1)                                                                         --------->ALFIN1 <------NtERF2                                                                        <-------GAMYB   <---------RAP2.3(3)                                                                        <---------ABI4(1)------------                                                                        <------NtERF2   <---------O2                                                                        --------->ATERF1(1)<---------ANAC46                                                                       <---------ATERF1(1)<----------                                                                       <---------MYB46(3)------>NtERF2                                                                       <---------DEAR3(2)<---------RAP2.3(1)                                                                       <---------DEAR4(2)<---------ERF1                                                                      --------->ALFIN1  <---------RRTF1(3)                                                                      <---------DREB2C(2)<---------RRTF1(1)                                                                      <---------DEAR3(1)<---------RRTF1(2)                                                                   <---------TGA1a      <---------RAP2.6(2)              ------>NtERF2                                        --------->TGA1a      <---------ATERF1(2)             --------->ANAC58                                      ==================================             --------->ANAC58                                      --------->ANAC58     <---------ANAC46          ----------->HVH21          --------->ATHB12              --------->ANAC58     <---------DEAR3(1)          <---------DEAR3(1)        <---------AHL20(2)             <---------O2 ------>NtERF2--------         --------->SPL7             --------->AHL20(1)             --------->ANAC46  ----------->TGA1       <---------SPL7       <------NtERF2            <---------LBD16 <---------ABI4(1)--------->MYB52(1)       --------->TOE1(2)  --------->DEAR3(1) <------MYB83          <---------DEAR3(1)----------->HVH21    --------->MYB52(1)  <---------At4g35610  <------MYB46(1)       =============MYC_MYB --------->ATERF1(2) ----ANAC58 --------->ATERF1(1)     <---------AHL20(1)             --------->O2----------->HVH21 ----ANAC58<---------ATERF1(1)      --------->AHL20(2)             =============MYC_MYB--------->RAP2.6(3)   cgagaagaacggacgacgccttctacagccgtcgctattttattggaaggtgagtctcggaagatggacacggcggtggcgctgccagtgacggcggtta  24554700            ----------->HVH21           --------->ATERF1(1)        <------NtERF2 --------->ANAC58        --------->ATERF1(1)        <---------ABI4(1)       <---------ATERF1(1)       <---------DEAR4(2)                     <---------LBD16       <---------ORA47(2)                   ------>ZmHOX2a(2)       ------>NtERF2  --------->ANAC58     <---------GLK1(1)      --------->ATERF1(2)                  --------->GLK1(1)      <---------ATERF1(2)                 <---------ARR14(2)      <---------DEAR3(1)                  --------->ARR14(2)      <---------RAP2.6(2)                 --------->ARR11(3)     <---------ORA47(1)                   <---------ARR11(3)           <-----------ARR10            < ----HVH21 --------->At5g28300<------ZmHOX2a(2)                        --------->GLK1(2)            < >MYB55(2) <------NtERF2 ---------->DOF2  <---------AGP1               --------->ARR14(2)           < -DEAR3(2)<---------ATERF1(1)<---------ARR11(3)                        <---------ARR14(2)           < -MYB46(3)<---------MYB46(3) <---------ARR14(2)                     ----------->ARR10               - >AtMYB77 <---------DEAR3(2) --------->ARR11(3)      --------->GLK1(2)<---------GLK1(2)    <--------- -----------WRI1    ---------->DOF2      <---------CCA1(2)        --------->LBD16      <---------ARR14(2) =MYC_MYB<---------DEAR3(1)  --------->ARR14(2)  --------->LBD16 <---------ANAC46      <---------GLK1(2) ->At5g28300--------->WRKY38(1)------>ZmHOX2a(2)--------->LBD16 <---------LBD16        --------->ARR14(2)   gagctaggccggcggtgactgtgaaagcaaagatcggagacttggatctcccgagaattttgaatttgcggagaatctccatttttgtggattctttggg  24554800                                                                                        <---------WOX13(1)                                                                                      --------->ATHB12              <---------ANAC58                                                      <---------WOX13(1)              <---------ANAC46                                                     <------------CBF         <---------AHL20(2)                                                     =====================       <---------YAB1                                                           ------>ZmHOX2a(2)       *TSS   <---------ANAC58                                                 <------ZmHOX2a(2)      <---------AHL20(1)                                                       ====================== ---------ANAC55(2)                                                         <---------DEAR3(2) ---------ANAC46                             <---------ALFIN1              --------->ETT(1) ---------ANAC58                         --------->At4g35610             <-----------HVH21    ------- ---------ANAC58                        --------->ANAC58               <---------DEAR3(2)  ---------- -------->ANAC55(2) --------->MYB52(1)  --------->ANAC58     <---------ANAC58 --------->ARR14(2) -DOF2<---------AHL20(2)        <------ZmHOX2a(1)            <---------ANAC58 <---------ARR14(2)   tttcgtattatttttttcgtagtaacgaagaagaggacggagaagctacacattttctaacttacttgcaagtcgggtcggatcggattgatggacaatc  24554900             --------->LBD16           ------>ZmHOX2a(2)          --------->ARR14(1)          <------ZmHOX2a(2)         --------->ARR14(2)         --------->GLK1(2)         <---------ARR14(2)        <------ZmHOX2a(1)                          --------->At4g35610                              <     <-----------RAV1(2)                           <---------ZAT2                                   - ==============HOX2a_HOX2a                         --------->ZAT2                ----------->GT1    - ==============HOX2a_HOX2a                         <---------At4g35610          --------->DAG2     -- -->GLK1(2)<---------LBD16         --------->AHL20(2)    <---------ANAC58     ---------->DOF2      -- -->CBF----------->ARR10           <---------AHL20(2)    <---------ANAC58 --------->YAB1         ----   taatgggccaggatccggttagactaatcgatgtgattttaatgggctaagtaagctgggcttggcaaatagccaaatataaaaggttaatttagtcaaa  24555000                             <---------ARR14(2)                           ---------->DOF2                        <---------ANAC46                        --------->ANAC55(2)                        <---------bZIP60(1)                        ----------->GT1                        <---------ANAC55(2)                       <---------TOE2(3)                      <---------TGA2(2)                      --------->MYB52(1)           <---------AHL20(2)--------->ARR14(2)          --------->AHL20(2)--------->GLK1(1) --------->RVE1(1)   ----------->TGA1 ---------ARR11(3)   ----------->HVH21                                       --------->ANAC58 -------->ARR11(3)   ------->GAMYB                                           --------->ANAC58 -------->GLK1(2)   <---------MYB52(2)                 --------->ICU4        --------->ANAC46     <-- ------->RVE1(1)  <-----------GT1                  --------->At5g28300   ---------->DOF2     -------- ------->CCA1(1)  --------->MYB52(1)              <---------ZAT6       --------->At5g28300  <-------- ----->AHL20(2)  --------->AHL20(2)               ----------->GT1     ----------->GT1  <-----------GT1   aaaatctctcaatttaaaattaactgacgtaaatcccccttcagtatcaatactgtaaaaattggatagacacagtaaaacgcagtgttttacagaatct  24555100                                                              <-----------GT1                                                    <---------TOE2(3)                                              --------->AHL20(2)                                              <---------AHL20(2)             <---------bZIP60(1)          <---------YAB1     <-----------GT1 --------DOF2--------->bZIP60(1) --------->GLK1(2) ---------->DOF2 <----------DOF2     ----------->GT1 ->GLK1(2) <-----------GT1       <-----------ARR10<---------AHL20(2)                  <---------TOE2(2) -GLK1(2) ----------->HVH21     <---------GLK1(2) --------->AHL20(2)           ---------->DOF2    <--   cttttaatcgatttgacatcacacaaacttcagagaatctcattttgataaattaaagttttttttccactttgtgaattttaaagcctaggtaaattag  24555200                 <---------ZAT18                 --------->ZAT18                                       ----------->RAV1(2)            <---------AHL20(2)                                      --------->MYB46(3)           <---------AHL20(2)                                   ------>MYB46(1)       <---------AHL20(2)                                       ------>MYB83     --------->ANAC55(2)                                       --------->ANAC46           <---------ANAC58  --------->ARR14(2)        ------->TEIL                      --------->MYB46(3)          <---------ANAC58  <---------ARR14(2)       <---------CCA1(2)          <----------DOF2<---------ALFIN1 <---------ANAC58 -------ZAT18  <---------------AtSPL8   --------->MYB46(3) <-----------GT1            <---------ANAC58   tgcatatatgtaatttaagtgtacatactgtatctctctgcaacgaatacaaccttcttttttacccactaccacctgttttcgctaggcttgctggact  24555300  Previous    Next  AGI:  At1g65950.1    Description:  ABC1 family protein. similar to ATATH9 (ABC2 homolog 9) [Arabidopsis thaliana] (TAIR:AT2G40090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22202.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain ABC-1 (InterPro:IPR004147); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 24550367    to: 24554807    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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