Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->YAB1                       ----------->GT1                                                <---------AtLEC2                    <---------ICU4                                                 <-----------GT1                   <---------ATHB51                                            <---------AHL20(2)                   --------->ICU4                                              <---------ICU4                   <---------ATHB12                    <---------AHL20(1)      --------->AHL20(2)           <---------MYB52(2)                          --------->AHL20(1)      <--------ATHB1 --------->At4g35610<--------ATHB1                     --------->AHL20(2)      --------->YAB1 --------->ZAT2----------------->AGL3                  <---------AHL20(2)      <---------AHL20(1) <---------ZAT2<---------ATHB12                       <---------AHL20(2)      --------->ICU4       -- <---------At4g35610--------->YAB1                    --------->AHL20(2)    --------->YAB1         -- -DOF2 ------>ZmHOX2a(2)                   <-----------GT1                 <---------AHL20(2)      <-   gcgagctgatccaactaatcaataatggtaacaaatacaaaaaataaacgctctaattttatttcagtcaaatgtttttaataattttccatgtccgaaa  24542100                    --------------->AGL15                    <---------------AGL15              --------->YAB1             <---------YAB1                                                      ------>MYB83          <---------AHL20(2)                                                     ------>MYB46(1)          --------->AHL20(2)                                                <-----------GT1        <----------DOF2                          --------->ATHB12       --------->AHL20(2)     <---------ARR11(3)                          <---------AHL20(2)     <---------YAB1     --------->ARR11(3)    <---------TOE2(3)     --------->AHL20(2)     <---------AHL20(2) ------->TOE2(3) <-----------GT1                 --------->ATHB51      --------->YAB1 ------->TOE1(3)<---------YAB1                <---------ICU4           --------->TOE2(3) ---------DOF2<---------ICU4                 --------->ICU4     ----------->GT1<---------MYB59    ---   actttaaaatcttttattattactaagttaagaaaattgcaaatgtaagaattatttgtttctaaatagataatattaataccaaattgatattccaaaa  24542200               --------->ATHB12        <---------ANAC58        <---------ANAC58      <---------AHL20(2)    --------->GLK1(2)       --------->ATHB12      <-----------GT1   --------->YAB1              <--------ATHB1   <---------AHL20(2) <---------WOX13(1)            --------->YAB1 <---------AHL20(2) --------->ATHB12               <---------YAB1 ------>AHL20(1)   <---------YAB1                --------->YAB1             <<<<<<<<<TBF1   catattattttcttgtttgatttgattgataatctattaactgataaacaacaatgatagaaatatgttctctaattcttcttctctagcattcaaaaat  24542300                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                ---------->DOF2                                                             --------->YAB1                                                          --------->YAB1                                                          <--------ATHB1                                                          <---------ICU4                                                          -------->HAHB4                                                         <---------AHL20(2)   <----------TaMYB80                                                         <---------YAB1      --------->AHL20(1)                                                         <---------ATHB51    <---------AHL20(1)                                                       --------->YAB1 ----------->GT1                --------->AHL20(2)                    --------->AHL20(2)     <---------AHL20(2)             --------->TOE1(3)              --------->ZAT6--------->ATHB51  <---------AHL20(2)             --------->TOE2(3)     <-------TEIL       <---------AHL20(2)    --------->YAB1     ----------->RAV1(1)          --------->CCA1(2)  --------->AHL20(2)     --------->AHL20(2)     --   --------->MYB46(3) ----------->GT1     <-----------GT1--------->ICU4    --------->ICU4<----------DOF2   tcacatccaacaaaaccataaattttgtaattttagatacaattttacactaaaaattaataattgtaaagcttgtaattatattcccaaactttattct  24542400                                                                                      ------->GAMYB                                                                                     ----------->GT1                                                                              --------->ATERF1(1)                                                                              --------->At4g35610                                                                              <------NtERF2                                                                             ------>NtERF2                                                                             <<<<<<<<<AtERF-3                                                                             <<<<<<<<<AtERF-1                                                                             <<<<<<<<<AtERF-5                                                                             <<<<<<<<<AtERF-4                                                                             <<<<<<<<<AtERF-2                                                                             <---------RAP2.3(1)                                                                             <---------MYB46(3)                                                                             <---------ATERF1(1)                                                                             <---------ERF1                                                                            <---------ANAC46                                                                            --------->ATERF1(2)                                                                            <---------RAP2.6(2)                                                                            <---------RAP2.3(2)                                                                 ------------>CBF --------->REM1(1)                                                           <----------DOF2  <---------RAP2.3(3)                                                      <---------PCF2        <---------DEAR3(1)                <-------TEIL                          --------->TCP20       <---------ATERF1(2)   --------->AHL20(2)                            --------->MYB52(2)        --------->RAP2.6(3) ------->AHL20(2)--------->YAB1    <----------DOF2    --------->TCP15(1) --------->ALFIN1     -------   ataaattaaaacttagcattcatattgttgaatatgacttttgaattttgttagtgggacccttttatacaataagtggcggctacaacgaaaaatcaaa  24542500                                <--------ZAP1                               ----------->GT1                          --------->MYB52(1)                                                   ------                         --------->ICU4                                                        ------     <---------MYB59----------->GT1              *TSS                                 <---------ARR11(3) --->DOF2           --------->YAB1        --------->YAB1 --------->AHL20(2)--------->MYB46(3)  ------   gtagggaccaaaatgatacaaatcgtaataacggggtcaaaataacataatccaaacttttaaatagcataaatacaacaactctcaagacctgtacaag  24542600                                                                                  ------>ZmHOX2a(2)                                                                                 <------ZmHOX2a(2)                                                                                --------->ARR14(2)                                                                                <---------ARR14(2)                                                                            ------>NtERF2                                                                           --------->DEAR3(1)                                                                        ------>ZmHOX2a(2)                                                                       <------ZmHOX2a(2)                                                                       <---------GLK1(1)                                                                      --------->ARR11(3)        ------>MYB46(1)                                               <---------ARR11(3)        ------>MYB83                                                  <---------ARR14(2)      <---------MYB111(2)                             ------>ZmHOX2a(2)--------->GLK1(1)      <---------MYB111(1)   <---------GLK1(2)       <---------ARR11(3)--------->ARR14(2)      <---------MYB46(2)   --------->At4g35610      --------->ARR11(3)<---------AGP1   <-----------GT1         --------->ZAT2        <----------DOF2     <---------CCA1(2) --->ANAC58                <---------ZAT2     --------->LBD16      --------->HSFB2a(2)             <- --->ANAC46        <---------ICU4             ------>NtERF2        <---------HSFB2a(2)       -------- --->ANAC58        --------->YAB1           <---------LBD16        <---------HSFC1(1)        <-------   ctatttcacctacttcatcactcatcaccagcttcgcatcttcttctccggcttgatcttctctcgtttctagatctccgacgatcggaatatcaaatcc  24542700                                                                           <---------ARR14(2)                                                                          --------->GLK1(1)                                                               <------ZmHOX2a(2)                                                              --------->ARR11(3)                                                              <---------ARR11(3)                                                        <---------HSFB2a(2)--------->ARR14(2)      --                 --------->YAB1                       <---------------------WRI1               <-----    --------->AHL20(2)                               <-------GAMYB        <---------GLK1(1)    <----- -----ZmHOX2a(2)<---------ATHB12                   <---------ANAC58    <------NtERF2           ------ ->ARR14(2)   --------->WOX13(1)                   <---------ANAC58   ----------->GT1 --------->HSFB2a(2) --ARR14(2)<-----------HVH21     >>>>>>>>>MYB2     <---------ANAC46  --------->ALFIN1 <---------HSFB2a(2)   gatcgattaattctgtcaatcacacaaaaaccgaaaaccaaaaaaaaaccatggcgtttgagaagatcaaggtggcaaatcccatcgtcgagatggatgg  24542800                                                                             --------->ATHB12     <-----------GT1                                                   --------->ANAC58   ==================HOX2a_HOX2a                                       --------->ANAC55(2)   ========================HOX2a_HOX2a                              --------->ARR14(2)   ------>ZmHOX2a(2)                                                <---------ARR14(2)  ===================HOX2a_HOX2a                                <---------WOX13(1)  =========================HOX2a_HOX2a                         <---------ANAC46  <------ZmHOX2a(2)                                           --------->ATHB12 <---------ARR11(3)                                           <---------MYB46(3)    <----------DOF2 --------->AGP1                                             <---------MYB52(1)   <-----------GT1 --------->ARR11(3)          ------>ZmHOX2a(2)      <---------CCA1(1)  --------->ANAC58 --------->ARR10    ------>ZmHOX2a(1)        --------->YAB1<-------GAMYB    --------->ICU4    ------- -MYB46(1)          ================HOX2a_HOX2a     <---------RVE1(1)  <---------ANAC55(2)   <------- -MYB83       ======================HOX2a_HOX2a    --------->ARR11(3)  --------->ANAC46  <---------ANAC58 ----->GT1    ------>ZmHOX2a(1) <----------DOF2    <---------ARR11(3)--------->CCA1(2)   <---------ANAC58   tgagatcttacttctccttctcctctctcgatctctttcgctatctataatcagatattttcgttgattggatacgaaatgatttactttcgcttgccta  24542900                  <---------ANAC46            --------->ANAC58               <---------MYB52(1)             --------->ANAC58                             <---------ANAC58              <-------GAMYB          --------->HSFB2a(2)                                   --------->ANAC55(2)             <---------ANAC58        <---------HSFB2a(2)                       <---------ANAC46             <---------ANAC46       <---------LBD16<-------MYC2               <---------AtMYB61             <---------ANAC58     ------>ZmHOX2a(2)<-------MYC3          <------MYB46(1)   <---------ANAC58         --------->HSFB2a(1)     <---------GLK1(1) ------->MYC3          <------MYB83      <---------ANAC55(2)         <---------HSFB2a(1)     --------->GLK1(1) ------->MYC2     --------->ATHB12  --------->YAB1         --------->HSFC1(2)  ------>ZmHOX2a(2)--------->ANAC46    <---------WOX13(1)  --------->ATHB12 -------------->WRI1<---------MYB46(3)   <-----------ARR10      --------->ATHB12 <---------ANAC46 --ANAC46<---------HSFC1(2) <---------At4g35610  ------->TEIL   <---------MYB46(3)   <---------YAB1 <   gattgtaacgaagtttcgttgtttgttctgatctgatctctggaatctacgcatgtgtaaactcgttgattgatttggttttggtgtatgattacgttac  24543000  Previous    Next  AGI:  At1g65930.1    Description:  isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative. similar to ICDH, isocitrate dehydrogenase (NADP+) [Arabidopsis thaliana] (TAIR:AT1G54340.1); similar to isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT5G14590.1); similar to NADP specific isocitrate dehydrogenase [Daucus carota] (GB:BAA34112.1); similar to NADP-dependent isocitrate dehydrogenase [Prunus persica] (GB:AAL11503.1); similar to isocitrate dehydrogenase (NADP+) [Apium graveolens] (GB:CAA73139.1); contains InterPro domain Isocitrate dehydrogenase NADP-dependent, eukaryotic; (InterPro:IPR004790) Range:  from: 24542549    to: 24545792    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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