Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               --------->HSFC1(2)                             <---------HSFB2a(1)                             <---------HSFC1(2)                             --------->HSFB2a(1)                           <---------PCF2                 <---------AHL20(1)                 <---------AHL20(2)             <---------AHL20(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)             --------->AHL20(1) ------>MYB46(1)             --------->AHL20(2) ------>MYB83            --------->AHL20(2)<---------MYB59                 <---------ANAC55(2)         xxxxxxxxxxx           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         --------->AHL20(2)            <---------ICU4          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ----------->GT1                   <-----------TGA1         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------TOE2(3)             ----------->GT1    <xxxxx -------At4g35610--------->AHL20(2)    --------->ANAC55(2)    ----------->GT1      --------->YAB1   aactcatatacaaaattaattaattcatgggaccttccttcacgttttaagtttgttataaaataagtaaaattgattcagtaaatcgtcatgacaaacc  24430500                                                                                                 <---                                                                                                -----                <---------ANAC58                                   <---------AHL20(2)           <----                <---------ANAC58                                   --------->AHL20(2)           -----               <---------TOE2(3)                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           -----              <-----------GT1                  ------->TEIL       --------->AHL20(2)           <xxxxx    --------->ANAC58                    <---------DAG2     --------->TOE1(2)                ---------    --------->ANAC58              <---------HSFB2a(2)     <---------ANAC58        --------->ANAC58  -    --------->ANAC46 --------->TOE1(2)  <----------DOF2   <---------ANAC58        --------->ANAC58 --  <-----------GT1  <-------TEIL   --------->HSFB2a(2)  <-----------GT1       ------->GAMYB ---------- xxxxxxxxxxx>smallRNA(si3)  --------->AHL20(2)<---------AtLEC2 ----------->GT1  <xxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxsmallRNA(i)    --------->ICU4   <---------YAB1------->GAMYB     --------->MYB46(3)-------   tgatttacgccaagttttacgttcatgcgattattttcagaactttatgcatgttttcaaccgtgcgattaaatttcaacgaccaagtaatccaccatta  24430600           <---------ZAT18           --------->ZAT18          <---------ANAC58          <---------ANAC58          <---------ANAC46         <---------------AtSPL8         --------------->AtSPL8         --------------->AtSPL3     --------->TOE2(3) ------At5g28300 ---->MYB52(1) -----DOF5.7(2)                                                                            --------->SPL7 ------->MYB.PH3(1)                                                                   ------>NtERF2 ------->AtMYB77                                                                  --------->ANAC58 xxxxxxxxxxxxxxxsmallRNA(si3)                                                     --------->ANAC46 ------>AGL15                                                              <xxxxxxxxxxxxxxxxxxxsmallRNA(si3) -------->At5g28300                                     <----------ID1<---------AHL20(2) <---------SPL7 --------->GT1                                          ----------->GT1   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------->AGL2                                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------ALFIN1 xxxsmallRNA(fl3)           --------->WOX13(1)--------->TOE2(3)      ----------------------->TaNAC69(2) -->DOF5.7(2)             <---------ATHB12 <-----------GT1      --------->YAB1    --------->ANAC58 --   acggttacattagcgtacaaatttcgccatcaatctaattccaaattaccttgatttagggaaaaataagaattaatatgctatacgacaccgtatgatg  24430700                                         --------->ARR14(2)                                         <---------ARR14(2)                                        <------ZmHOX2a(1)                                --------->At5g28300                               --------->ANAC46                               --------->TOE2(3)                               --------------->AGL15                               --------->TOE1(3)                               ----------->GT1                     --------->MYB52(1)<---------YAB1                    ----------->HVH21--------->YAB1     --------->CCA1(2)         ------->GAMYB                             ---------->DOF2    --------->ARR14(2)       <---------At5g28300                       --------->ANAC58            <-    <---------ARR11(3)   --------->At5g28300                           --------->ANAC58            -- ------>P         <----------DOF2   --------->ICU4                   --------->MYB52(1) <---------ANAC46   caaccagatataaactatggctctaacggttaaccgtaattaggattcacttcgaaataaaactaaacaaaaaacgaaagacttcaagtgtcttatagta  24430800                  ------->MYC2                  <-------PIF5                  ------->PIF5                  ------->MYC3                  <-------MYC3                  <-------MYC4                  ------->MYC4                  <-------MYC2                                    --------->WOX13(1)                 <---------ANAC55(2)                      <---------ARR14(2)                 ===========================================bZIP_DOF                 <---------O2                             --------->ARR14(2)                 --------->O2                    <----------DOF2------------>CBF          ----------->GT1            <---------ANAC46  --------->LBD16        ---------->DOF2              <---------ANAC58 --------->ANAC55(2)                          --        ===================bZIP_DOF  <---------ANAC58 --------->ANAC46                          <---- --------AHL20(2)--------->TGA1a   <---------ANAC46  <---------LBD16              ----------->TBP  <- ------->AHL20(2)<---------TGA1a<---------MYB52(1)<-----------HVH21             <---------------AGL15   tttttttagacaaagtaacacgtggattaatacagttgggcgtattagagtctttcacgggatttgatcaatctataaactactataagtagcccatctt  24430900             <---------YAB1          <---------YAB1          <---------ANAC58       <---------YAB1       ------------>CBF   <---------ANAC55(2)  <---------ICU4                                                 ---------->ID1   --------->ANAC55(2)------------>CBF                                             <---------ANAC58 ------->TOE2(3)     --------->YAB1    <---------ANAC46                     <------------------------ANAC81 -------GT1--------->YAB1  --------->YAB1                                <----------DOF2    ------>ZmHOX2a(1) --------MYB59    --------->YAB1  <---------ANAC58               ------->TEIL      <---------ANAC58   accttacttaatattatcatttatcacaatgacaattcttgtcgtagatcgatactacatgctcatgaacttactctttgctctaacttgtctcctcttg  24431000                                              --------->ANAC58                                              --------->ANAC58                                             ------>NtERF2                                            <---------ALFIN1                                           <------NtERF2<---------ARR14(2)                                          <---------RAP2.6(3)                         <---------SPL7                                         --------->RAP2.3(3)                  <---------GLK1(1)                                         --------->ANAC58                     --------->GLK1(1)                                         --------->RRTF1(2)                   <------ZmHOX2a(2)                                         --------->RAP2.3(2)                 <-----------ARR10                                         <---------ATERF1(2)                 <---------ARR14(2)                                         --------->RAP2.6(2)                 --------->AGP1                                         --------->ANAC58                    <---------AGP1                                         --------->DEAR3(1)                  <---------ARR11(1)                                         --------->ATERF1(2)                 <---------ARR11(3)                                         ------->GAMYB  --------->GLK1(2)    --------->ARR14(2)                                         --------->ANAC46                  --------->LBD16                        <---------ARR11(3)------>NtERF2 --------->ARR14(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                      --------->ANAC46  --------->ERF1 <---------GLK1(2)  <---------TOE1(2)         <            <----------DOF2             --------->RAP2.3(1)     <------MYB83<---------CCA1(2)       <           <---------ANAC58             --------->MYB46(3)    <---------WOX13(1)  <---------ANAC46 --           <---------ANAC58     <---------ICU4--------->MYB46(3)<------MYB46(1)------>ZmHOX2a(2)   --      <---------ICU4  --------->ANAC58 <---------At4g35610  --------->ATHB12<---------ARR14(1)    <--      --------->ATHB12--------->ANAC58 --------->At4g35610 <---------YAB1<---------LBD16        -----   aacttaactcattgctttagccccaagaaattcaacatttcagccgccacgaccagcgattctgattggtctatcgccggatctacgtggtatggtaacc  24431100       --------->ANAC58       --------->ANAC55(1)       <---------ANAC55(2)       --------->ANAC58       --------->ANAC55(2)       --------->ANAC46                                                                   --------->AHL20(1)      <---------LBD16     --------->ARR11(3)                                              <---------AHL20(2)     --------->CCA1(2)    --------->AHL20(1)                                             --------->AHL20(2)    <---------ARR14(2)    <---------ARR11(3)                                             <---------AHL20(2)    --------->ARR14(2)   <---------AHL20(2)                                      <---------AHL20(2)  --------->LBD16      --------->AHL20(2)                      --------->ANAC58 <---------ARR11(3) ---------LBD16   --------->At5g28300                          --------->ANAC46 --------->AHL20(1)  - -----------------AGL1 <---------AHL20(2)     <---------At5g28300  --------->ANAC58  --------->AHL20(2) ---->NtERF2 ----------->HVH21 <---------ANAC58   --------->AGP1   --------->ANAC58  <---------AHL20(2) ------->MYB52(1)----------->GT1          --------->WOX13(1)   --------->ANAC58 <---------AHL20(1) -- -------ALFIN1--------->MYB52(1) <---------ZAT6  <---------At4g35610      --------->MYB52(1)  <------ -->GAMYB   --------->DEAR3(2) <---------ANAC58  --------->At4g35610    <---------MYB52(2)--------->AHL20(2)   ccaccggatacggaagcgacggtatatatatattcgtgttatgtcaattacagctctagataaacaagcaagaaactaactatatatttaaattaattac  24431200                      --------->YAB1                     <---------YAB1                    --------->AHL20(1)                    <---------AHL20(2)                    --------->AHL20(2)                   <---------ICU4               <---------AHL20(2)               --------->AHL20(2)            --------->ATHB12       --------->AHL20(2)       <---------AHL20(1)       <---------ARR11(3)       <---------AHL20(2)       --------->AHL20(1)                    --------->HSFB2a(2) --------->TOE2(2)       --------->ARR11(3)                    <---------HSFB2a(2) ------->GAMYB --------->TOE2(3) --------->YAB1        <-------GAMYB          --------->MYB46(3)          <------NtERF2 ------->GAMYB<---------WOX13(1)        <---------MYB46(3)    <---------ALFIN1             --------->LBD16 -------->MYB46(3)<---------YAB1   <---------ANAC58    <-------GAMYB                     <---------LBD16 ------>P  <---------YAB1          <---------ANAC58   <-----------RAV1(1)<-----------------AGL1  <--- -----GT1  --------->ICU4     --------->ALFIN1   <---------GLK1(1)    <---------MYB52(1)--------->At4g35610   taaccacaatatattgattaattataatgaaggtggagcttgtggttatggaaatgctgttgcacaacctccgttttcgaaaatggtatcagccggaggt  24431300                                                        --------->YAB1                                                     <---------ICU4--------->At4g35610                               <---------AtLEC2     --------->AHL20(2)                               <---------ANAC58     <---------YAB1 <---------LBD16                               <---------ANAC58     <---------AHL20(2)                              <-------TEIL         --------->AHL20(1)                           <---------ANAC46        --------->AHL20(2)                  ---------->DOF2        ----------->GT1<-----------GT1   <---------MYB52(1)     <---------AtMYB61        <---------AHL20(2)  <-------GAMYB <------ZmHOX2a(1)   <-----------GT1<---------AHL20(1)             --------->YAB1 <---------MYB46(3)   <------ZmHOX2a(1)<-----------RAV1(2)    --------->YAB1    <---------TOE2(3) ----TEIL --------->ANAC46--------->ALFIN1        --------->YAB1   <---------At4g35610        <------   ccgtcgttgttcaagtcaggaaaaggatgtggtgcatgttaccaggttactaatataattacaatattaagcggaagagattaagaataaatgaaagatt  24431400  Previous    Next  AGI:  At1g65680.1    Description:  ATEXPB2 (ARABIDOPSIS THALIANA EXPANSIN B2). Identical to Putative expansin-B2 precursor (EXPB2) [Arabidopsis Thaliana] (GB:Q9SHY6;GB:O04484); similar to ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4) [Arabidopsis thaliana] (TAIR:AT2G45110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70613.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Major pollen allergen Lol pI; (InterPro:IPR005795); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Pollen allergen/expansin, C-te Range:  from: 24430929    to: 24432062    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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