Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------ZAT14           <---------WOX13(1)               --------->ZAT18          <---------ANAC58            --------->YAB1                                            -----          <---------ANAC58    <---------ATHB12  <----------DOF2                              --------         --------->ATHB12   ------>MYB83    --------->ZAT14                     ------->TEIL -------- <---------TOE2(3)          ------>MYB46(1) <---------ZAT18        <---------ICU4            -------- -------DOF2       ---------->DOF2 --------->YAB1      --------->YAB1 --------->YAB1  --------->MYB46(3)   tttaagaaaattgattgctaacaaagaaccaaatcaataagaatagtgaactttgaatcagactcttaagaatcacaatttgaatctaaccaaaaccata  24424600                      ---------->DOF2                 --------->YAB1                <---------ATHB12               ------>MYB46(1)                                       ----------->GT1               ------>MYB83                                          --------->ANAC58 ---->MYB52(1)--------->WOX13(1)                                     --------->ANAC58 ->TOE2(3)   --------->MYB46(3)             ----------->GT1      --------->ANAC58 ->YAB1  --------->MYB46(3)           --------->YAB1             --------->ANAC58    ----------->GT1 ->TOE1(3)   --------->AtMYB61   <---------ATHB12          --------->YAB1           ------->TEIL   --   acagagagagaaccaccaatcacagaaagtctcaaatcaataagaatagcaaaaatttgaatcagactcgtaagtaaaacaaaatggatgtaaaaccaaa  24424700                                                     -------->HAHB4                                            --------->AHL20(2)                                   ----                                         --------->TOE2(3)       <---------ANAC55(2)            <----                                         --------->TOE1(3)       <---------YAB1                <-----                          --------->HSFB2a(2)        --------->YAB1                      <---------CCA1(1)                         ----------------->AGL1     <---------YAB1                       <---------RVE1(1)            --------->YAB1<---------HSFB2a(2)    --------->AHL20(2)                     <---------ARR11(3)           <---------ATHB12            ------->TEIL<---------TOE2(3)                    <---------GLK1(2) ----------->GT1         ----------------->AG    <---------AHL20(2)       --------->ATHB12 <---------AHL20(2) --------->GT1<---------YAB1    ----------->GT1 --------->AHL20(2)       <---------YAB1 --------->ARR11(3)   atagagaaaatcaatgataatacaacttccaaaacagtaagaaccttaaaattaatgatacaaaattacgagagtatgattcgaaatcgagattttttta  24424800                                                                                           --------->YAB1                                                                                           --------->ATHB51                                                                                           <---------ICU4                                                                                           <--------HAHB4                                                                                          --------->ICU4                                                                                          <---------YAB1                                                                                       <------NtERF2                                                                                      ------>NtERF2                                                                                     <---------ETT(2)                                                                                     --------->DEAR3(1)       ----------->GT1                                                              <------NtERF2      ----------->GT1                                                               --------->ATERF1(1)     --------->DAG2                                                                <---------ATERF1(1)   ---------->DOF2                                                                --------->DEAR3(1) --------->AtMYB61                                                           ---------->DOF2--------- ----->MYB46(3)                                         --------->ICU4      ----------->HVH21 -----At5g28300---------->DOF2             --------->AHL20(2)             --------->At4g35610   <---- ------GT1    <---------AHL20(2)          <---------ATHB12                ----------->RAV1(2)<-------   ccaccaaaagggaaatttaaagctaaattgaaaaccagtttcaaatgaattagaagaaatgttgaaggaaatgggtacctgaagccgtcgccattattat  24424900                                                                               ----------->GT1     <-        <---------HSFC1(2)          --------->GLK1(2)                         <---------TOE1(3)   <--  ------>ZmHOX2a(2)                 <---------ARR11(3)                        <---------YAB1--------- <------ZmHOX2a(2)            <---------ANAC46                                <---------TOE2(3)<----- >AHL20(2)                    ----------->GT1          *TSS                 --------->YAB1--------->ANAC55(2) -------GT1              <-----------RAV1(1)           >>>>>>>>>TBF1       <---------YAB1 <---------ANAC55(2) --YAB1 --------->HSFC1(2)<-------GAMYB             >>>>>>>>>TBF1      <----------DOF2--------->ARR11(3)   acgatcgtgaagcttcgacttctctctctgttgcgaaaaatctgaaggaacgaagaagaagaaatggctacggctttattatggttaaaatcatgtgata  24425000                                                                                             ------>NtERF2                                                                                            ---------                                  <------NtERF2                                             <--------                                <---------ANAC58                                           --------->ATERF1(1)                                <---------ANAC58           --------->AtMYB61              <---------ATERF1(1)                                <---------ANAC46           <---------ALFIN1           --------->DAG2                             --------->DAG2             --------->ANAC46         --------->ANAC58 <-- --------WOX13(1)          ---------->DOF2             --------->MYB46(3)        --------->ANAC58 --- ----------CBF         <-------GAMYB          --------->ATHB12                 ---------->DOF2<------NtERF2 -->HVH21             ----------->GT1         --------->YAB1        <-----------GT1  ---------->DOF2 ----WOX13(1)         <---------MYB46(3)     <---------ATHB12 <---------ATHB12--------->AtMYB61  <---   gattgaaatgtgatcaaatatgggctgttaaaaggcgtagaggcccattcattagcaaacaccactcatttaacccaaaaccaaagcaaaagcgacgccg  24425100             <---------YAB1           -------->ATHB1           --------->ATHB51           --------->YAB1           <---------AHL20(2)           -------->HAHB4           <--------HAHB4           <---------ICU4          --------->ICU4          <---------YAB1        <---------ICU4        --------->YAB1       <---------ATHB12         --------->ANAC58             ----------->GT1                       <- --------->ANAC46               --------->ANAC58           <---------ZAT14                         <- >DEAR3(1)<---------ATHB51  ------>MYB46(1)                --------->ZAT14                      <---- -DEAR3(1)<---------ATHB12  ------>MYB83            <---------ARR14(2)                         <----- -------ARR14(2)          --------->AtMYB61       --------->LBD16                              ------ ------>ARR14(2)          <---------MYB59       <---------LBD16                         --------->GLK1(1) ------MYB52(1)   --------->ANAC46<------ZmHOX2a(1) --------->ARR14(2)                  <---------GLK1(1)   ttttcgccactaattattatccccaagaccaaacaaggaccagatttaaaaccggatatagtatagtagaatcaattttctaagtaagagatttcagttt  24425200                                                                                 ----------->GT1                                                                              <---------AHL20(2)                                                                             <---------AHL20(1)                                                                    --------->AHL20(1)                                                                    <---------AHL20(1)                                                                    --------->AHL20(2)    <----------DOF2                                                 <---------AHL20(2) --------DAG2       ----------->GT1                        <---------ARR11(3)--------->AHL20(1) ---------DOF2    <-------GAMYB                            --------->ARR11(3)--------->AHL20(2) -------GT1   <---------WOX13(1)                        --------->DAG2  --------->AHL20(2)          - ----ZAT14  --------->ATHB12                      ----------->GT1  <---------ATHB12           <------ --->ZAT14 <---------YAB1           ---------->DOF2    ---------->DOF2 <---------WOX13(1)     -------   acttttcttttttttgattgggttgaaaaatgtccatagaaagagaaaaccatggtataaagttctccaattaattgaatataatgtaaatgggcatata  24425300           <---------ANAC58           <---------ANAC58          --------->ZAT2      --------->TOE2(3)      --------->AtMYB61    -------->P    ------>MYB83    ------>MYB46(1)  <---------MYB59  --------->AtMYB61                                                                               --- --------->DEAR3(2)        ----------->GT1                                                      ----- --------->MYB46(3)--------->TOE1(3)                                                            ----- ------>TEIL       --------->TOE2(3)                                   <---------AHL20(2)    -------- ---ARR14(2)     --------->ANAC58                                  ----------->GT1    ---------->DOF2 -->ARR14(2)     --------->ANAC58                        --------->MYB52(1)        ----------------->AGL1   tgaaccaacctaagcttgcaagcttaaaaatgtaaacaggtctaaaactaaacaggcctaaacggctacttgttaaattgccagagcctaaagaggtcaa  24425400                            <----------DOF2          <---------TOE2(3)<---------ANAC58     --------->ANAC46                            ------->TEIL ------->DOF2              <---------ANAC58     --------->ANAC55(2)                        <---------AtLEC2 ---->ANAC58      <---------ARR14(2)            ----------->GT1                  <------ZmHOX2a(1) ---->ANAC58      --------->ARR14(2)       <---------YAB1  ------->TEIL      --------->TOE2(2)      - ->WRKY18(1)     <------ZmHOX2a(1)        --------->AHL20(2)  <-----------GT1--------->TOE1(2)    <--   gaaagcatgttttaggtgaggatttgtttgcttttaatctccatttttataggtaacaatgtattttcaatttgttcaacataggaaaaatatgcatgtt  24425500  Previous    Next  AGI:  At1g65660.1    Description:  SMP1 (swellmap 1); nucleic acid binding. Identical to Pre-mRNA-splicing factor SLU7-A [Arabidopsis Thaliana] (GB:Q9SHY8;GB:O04483;GB:Q84WT4); similar to SMP2 (swellmap 2) [Arabidopsis thaliana] (TAIR:AT4G37120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71409.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ79297.1); similar to hypothetical protein OsI_026691 [Oryza sativa (indica cultivar-group)] (GB:EAZ05459.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) Range:  from: 24421770    to: 24424955    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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