Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                   <---------TOE2(3)                              <--                                                  ---------->DOF2                            --------                                                 --------->YAB1                        --------->ARR11(3)                                                 --------->AHL20(2)                    <---------ARR11(3)                                              --------->WOX13(1)          --------->ZAT18  --------->At4g35610 ------YAB1                             <---------DAG2                <----------TaMYB80<------ZmHOX2a(2) ---AHL20(2)            <---------ALFIN1<----------DOF2    --------->ZAT6 <---------ZAT18  ----------   tgtttatgcatagagacatgttgtcaacacttgagagagtccctttatcaattaaagtttaacacaaatagcatagtcccctatatcaagatcacctgca  24389200      <---------GLK1(2)      --------->ARR14(2)      <---------ARR14(2)     ------>MYB83     ------>MYB46(1)   <---------MYB59 -------->P -------->MYB52(1) ----->GAMYB                             <----------ID1 ------>MYB46(3)                         ----------->GT1 -------MYB111(1)                       ----------->GT1                                             < -------MYB52(2)                       ------------------------>ANAC81    <----------DOF2         <-- -------MYB46(2)                       --------->DAG2                    <---------ICU4          ---- ->ANAC46                             ---------->DOF2                <-------TEIL           --------- ->RAV1(2)                --------->MYB46(3)                       --------->YAB1      <-------TEIL -   actaaccaaattctcaccaaaatcactaacaaatgaaacaaaaaggaaaaaaaaaaaaaacagcatcaatgttcatcttttcccctacatacatatatat  24389300                                               --------->ATHB12                                           <---------YAB1                         <---------ANAC55(2)   <---------AHL20(2)                         --------->ANAC55(2)  <---------YAB1        --------->AHL20(2)                --------->AHL20(1)      --------->YAB1   <-----------GT1    <---------AHL20(2) ---------ARR11(3) --------->AHL20(2)     <---------AHL20(1) -------AHL20(2)   <---------AHL20(2)    --------->AHL20(2)       <----------DOF2    <-----------RAV1(1) ----->AHL20(2)    --------->AHL20(1)<---------TOE2(3)        ------>ZmHOX2a(1)    <---------At5g28300 >AHL20(2)  --------->ANAC46         <---------YAB1   <---------GLK1(1)           <-----------GT1 -------->ARR11(3)--------->AHL20(2) <---------TOE1(3)--------->GLK1(1)         <----------DOF2   aaaatctaaaataaacacaattttattacataacatattaagattatatttattggatttcttcctctcttttttaagtgtgatttactgttgtctctaa  24389400                         <-------TEIL                      <---------ANAC55(1)                      <---------ANAC58                                                      <--------                      <---------ANAC46                                                      <--------                      <---------ANAC55(2)                                                   ---------                      <---------ANAC58                                                      <--------                      --------->ANAC55(2)                                                   <--------                     --------------->AtSPL8                                                 <--------                     --------------->AtSPL3   <-----------GT1    ====================================            --------->MYB46(3)           <---------YAB1          ---------->DOF2   <---------ANAC58        --------->At4g35610           --------->ICU4 <---------ANAC58  ------------>CBF     ---------        <---------At4g35610   --------->AHL20(2)     <---------ANAC58--------->ANAC46       <--------   --------->YAB1    <---------------AtSPL8--------->YAB1      --------->AHL20(2)  <---------ANAC58   ttctttcatcagcaaacaccgattacgtacaaaataatacattattaataacatttcttactcaaaaaaatgcgccaattcaaaggcttgtctaacgtgt  24389500   --------->YAB1  <---------AHL20(2)  <---------YAB1 -TGA1a              <---------ANAC46                          *TSS -ANAC55(1)      <---------ANAC58                              ------>ZmHOX2a(1) >TGA1a          <---------ANAC58                        --------->GLK1(2) -ANAC46     <---------ANAC58                           --------->ARR14(2) -ANAC58     <---------ANAC58                           <---------GLK1(2) -ANAC58    --------->MYB52(2)     ---------->DOF2      --------->ARR11(3) =bZIP_DOF <-----------GT1        <---------AHL20(2)    <---------ARR14(2)      <---------AHL20(2) >O2    ----------->GT1         ----------->TBP       <---------TOE2(3)     --------->REM1(1) ------- -O2    <---------ZAT6        ----------->TBP         ----------->ARR10<-----------GT1  <----------DOF2   gtatataatagtgttacttgcttgcctatactatatataaagagagagagacttctaagattctcctccatttttgctacatttttttttctttgattaa  24389600                                                                                   <------NtERF2                                                                                  <---------ATERF1(1)                                                                                 --------->ATERF1(2)                                                                                 --------->DEAR3(1)                                                                                 <---------ATERF1(2)                                                                                 <---------DEAR3(1)                                                                                <---------LBD16                                                                              ------>ZmHOX2a(2)                                                                             <------ZmHOX2a(2)                                                                            <---------ARR11(3)                                                                            --------->ARR11(3)                                <---------ANAC46                        ---------->DOF2       <------                   <----------DOF2                                <---------ANAC46--------->LBD16                   <---------DAG2                                --------->At4g35610         <-------GAMYB               ---------->ID1   <---------ANAC58                 <---------At4g35610<---------ANAC46      <-----------GT1  <-----------GT1     ---------->DOF2      --------->MYB52(1)------>NtERF2 -->AHL20(2)  <-----------GT1   <---------ANAC58----------->GT1--------->ALFIN1 --------->ATERF1(1)   aaacatttttactatttttcgctttttgctatttccttgtaacttaaaagaagaaaaaatgagaggtagcggagcaaagatcgccggcgttttgccgttg  24389700                                                                   <---------ATERF1(2)                                                                   --------->ATERF1(2)                                                                   --------->ANAC46                                                                  <---------LBD16                                                                 <---------DOF5.7(2)                                                               --------->DOF5.7(2)                           --------->LBD16                     <---------MYB52(1)                           ------>NtERF2                       ----------->HVH21                          --------->ANAC46                    <-------GAMYB                        <-                         <---------LBD16                      <-----------HVH21             <------NtERF2                      XXXXXXXXXXXXXXXXXXX>MIR866-3P          <---------MYB46(3)            --------->LBD16                   <---------KAN4(1)                        ----------------->AGL1         <------NtERF2                   --------->KAN4(1)                        <-----------------AGL1       <---------ANAC46                  <---------KAN4(2)                   --------->ARR14(2)                 <---------LBD16                <------NtERF2                         <---------ARR14(2)                <------NtERF2               --------->LBD16                       <------ZmHOX2a(1)                 <---------MYB46(3)              --------->ANAC46                     <---------TOE1(3)                   ------>NtERF2-           --------->DEAR3(1)                      <---------TOE2(3)--------->LBD16   --------->ALFIN1 ---MYB52(1) <---------LBD16  <----------DOF2   --------->ALFIN1 --------->MYB52(1)<---------DEAR3(1)   tttatgctattcatcgccggaacaatctccgcctttgaagacatagagaggttgaggatttggccgttaccggcacaagttagccacggtggccggagaa  24389800                                                  ------>NtERF2                                                 --------->ANAC58                                        --------->ARR14(2)                                        <---------ARR14(2)                               <------MYB46(1)                                        --------->ICU4                                <---------ANAC58                                   --------->ANAC58            <---------YAB1         <---------ANAC58                           <---------ANAC46      --------->ANAC58---------->DOF2     --------->ATHB12       --------->ALFIN1    <---------ANAC55(2)  --------->ATERF1(1)      <---------ARR14(2) --------CCA1(2)          <---------LBD16      <---------ATERF1(1)      <------ZmHOX2a(1)<------MYB83 ------>TEIL --------->GLK1(1)     --------->ANAC58   <-----------RAV1(2)--------->ARR14(2)   <------   tgtatctaagtggagatttcaagcttgttacggagggaagcaaatatggagacgcctcagggattttgaaagaaggatttgatagaatgcttggtgttgt  24389900                     --------->WRKY38(1)                    <-----------HVH21                    <---------MYB52(1)                   --------->LBD16                   <---------At4g35610                   --------->At4g35610              <---------At4g35610                                        <-----------TGA1              --------->At4g35610                                       --------->ANAC55(2)           --------->TGA2(2)                                            <---------ANAC55(2)          <-----------HVH21                                             --------->bZIP60(1)         --------->ANAC58                                               --------->ANAC58         <---------bZIP60(1)                               =======================bZIP_DOF         --------->TGA1a                                   <----------DOF2         --------->ANAC46                                 <---------ANAC58    <---------ICU4         --------->O2----------->HVH21                ============================bZIP_DOF         --------->ANAC58                         ------>ZmHOX2a(2)     --------->ANAC55(1)         <---------O2--------->WRKY12            <---------GLK1(1)      =============================         <---------ANAC55(2)                     <---------At4g35610    <---------bZIP60(1)         <---------TGA1a                        --------->ARR14(2)      <---------TGA1a         --------->ANAC55(2)                    <---------ARR11(3)      --------->bZIP60(2)         --------->bZIP60(2)                    --------->ARR11(3)      --------->TGA1a         --------->bZIP60(1)                    <---------ARR14(2)      --------->O2        <-----------STF1     --------->GLK1(1)  <---------AGP1          <---------O2        <-----------bZIP910(1)               --------->ALFIN1<-----------RAV1(2)     ------>ZmHOX2a(1)       <---------ALFIN1 <---------LBD16     <---------MYB52(1)          --------->ANAC46 <----------CDC5 <---------LBD16        --------->MYB52(1)<---------ANAC58--------->TGA2(2)        -- ==================MYC_MYB   <---------GLK1(1)<---------MYB46(3)        --------->ANAC58          <-- ---ANAC46<-----------TGA1--------->LBD16<------NtERF2<----------DOF2  <-----------STF1 ------>ZmHOX2a(1)   gaggctgagccacgtcatctccggtgaccggaattcttcaggcaccggtggatctgctttgcttcagggacttcacgtcatcatctcctcctctaccgat  24390000       <-------TEIL   --------->MYB52(2) <---------MYB52(1)                            <---------ARR11(3) <--------P --------->WOX13(1)                 --------->ARR11(3)                      --------->YAB1 =========MYC_MYB                             <---------CCA1(2)           <---------ANAC46         <- --------->GT1        --------->REM1(1)   --------->YAB1              <----------DOF2 --------->ICU4< -------TOE2(3) --------->WOX13(1)  --------->TOE2(3)            ---------->DOF2      <---------YAB1-   gaggttagtttcatctatcaatctacaacaacaatttttcttaatgatatatcttcaagttgatgaaaaaagctttacgtttaatgtcattataagttac  24390100  Previous    Next  AGI:  At1g65590.1    Description:  ATHEX1/HEXO3 (BETA-HEXOSAMINIDASE 3); beta-N-acetylhexosaminidase/ hexosaminidase. similar to ATHEX2/HEXO1 (BETA-HEXOSAMINIDASE 1), beta-N-acetylhexosaminidase/ hexosaminidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G55260.1); similar to Os05g0415700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055557.1); similar to Os01g0891000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045052.1); similar to putative beta-N-acetylhexosaminidase [Oryza sativa (japonica cultivar-group)] (GB:AAT77374.1); contains InterPro domain Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883); contains Inter Range:  from: 24389563    to: 24394870    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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