Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              ----------------->AGL3                            ----------------->AGL2                       ---------->DOF2                   --------->ANAC58                                                        --------->GLK1(2)                 --------->GLK1(1)          <---------ATHB12     --------->At4g35610     <---------KAN4(1)                --------->ARR14(2)         ------>MYB83<----------ID1                    --------->KAN4(1)                <---------ARR14(2)         ------>MYB46(1)     --------->DAG2           <---------KAN4(2)   <---------ATHB12--------->ANAC58     --------->MYB46(3)    ---------->DOF2      --------->ALFIN1   ttccaatgagcaaaaaccgatacccaaaagaccaattacagaaccaatcgacaaaaaaaaacaaaaaagctgaaaacttgaaaatgtgggaataatctat  24377100                   <------NtERF2                  --------->LBD16                 <---------ANAC58                 <---------ANAC46         --------->ANAC58                 <---------ANAC58         --------->ANAC58                <---------LBD16 --------->LBD16                                                ======              --------->DAG2    --------->At5g28300                    --------->ANAC58        ======             ---------->DOF2   ----------->GT1                         --------->ANAC58        <-----            ---------->DOF2 <---------ARR14(2)                    <------ZmHOX2a(2)<---------GLK1(2)       <------ZmHOX2a(1)    --------->ARR14(2)                    ===================================     --------->ANAC58      <------ZmHOX2a(1)   --------->SPL7   <------ZmHOX2a(1)  <---------ARR11(3)     --------->ANAC58   --------->CCA1(2) <---------ANAC55(2)  --------->ICU4      --------->ARR11(3)   acttggccaggaacaaaaggcgggagataggaaccgtgaaaatcacgcatacgacctctcatgtaaggatcacaagacaagtatagatttttgacgagga  24377200                   <----------DOF2          <----------DOF2          ------>ZmHOX2a(1)        ------>ZmHOX2a(2)       <------ZmHOX2a(2)      <---------ARR14(3)      --------->ARR14(3)      --------->ARR14(2)      <---------ARR14(2)      --------->ARR11(3)      <---------ARR11(3)<---------At4g35610    ----------->ARR10   --------->At4g35610 =============HOX2a_HOX2a ==============HOX2a_HOX2a                                                                          < -ZmHOX2a(1)   ---------->ID1                                                                    <--- =HOX2a_HOX2a<-----------RAV1(1)        --------->LBD16              <------ZmHOX2a(1)   <----------DOF2   aacaagaagatccttttggtgcttttagctcaattgtttctccgagtttcacttccatgtctgtttctgtaggaataccatctacataattctttagtat  24377300               --------->AtMYB61              --------->MYB46(3)            --------->ANAC46   <---------ANAC58   <---------ANAC58                                          >>>>>>>>>TBF1                    ------- ----------DOF2<---------ALFIN1                ----------->HVH21>>>>>>>>>TBF1 --------->REM1(1)    -- --------GT1<---------ALFIN1           <---------YAB1     >>>>>>>>>TBF1  ----------->GT1<-----------RAV1(1)   cactttcttgttctccaccactgaaacttctcccatttgttatgagtctgtgatggagaagaagaagaagaagatgagttacaacaagttttgttgcaaa  24377400                                                                      --------->AHL20(2)                                                               <------MYB83                                                               <------MYB46(1)                                                              <---------TOE2(2)                                                              <---------TOE1(2)             <---------ANAC46                                 <---------AtMYB61         <---------ANAC58                                    *TSS     <---------AHL20(2)        <----         <---------ANAC58   <------MYB83                     <--------P        <-------GAMYB    <----        <---------MYB46(3)  <------MYB46(1)              <---------ANAC46     <---------MYB46(3)<----       <---------AtMYB61   --------->MYB59               <---------bZIP60(2) <---------TOE2(3)  <---- --->DOF2<-------GAMYB     --------->MYB46(2)         ----------->HVH21      <---------YAB1<---------AHL20(2) ------->CCA1(2)  <------ZmHOX2a(1)                 --------->ANAC55(2)<---------AHL20(2) --------->AHL20(2)   gagatggttttggttgtgtaggagagagtttggtaagacgagtgtttctcgtttatgtgacgcgtaggttttttaaattttggttgaagtcatttaatgc  24377500                                <---------ARR14(2)                               --------->GLK1(1)                               <---------GLK1(1)                             <---------ANAC58                             <---------ANAC58    <------------CBF                          <---------WOX13(1)   <---------YAB1 --------->LBD16                         <------------CBF     <---------GLK1(2)      <-----------RAV1(1) ----------->GT1        --------->ATHB12    <---------TOE2(3)<---------ANAC58 -----ANAC46        ------>MYB83--------->ARR14(2)           <---------ANAC58 -----ANAC58        ------>MYB46(1)    --------->LBD16       <---------ANAC55(1)           <---------AHL20(2) -----ANAC55(2)    <---------ALFIN1  <---------LBD16         <---------ANAC46 <----------DOF2 -----ANAC58      --------->MYB46(3)------>ZmHOX2a(1)        <---------ANAC55(2)    <----------DOF2--   gtatggttttttttggttcacccacttgattgggtttcctccggtttagattattgtcttcttgcgtgaaattgttggccctttaacttttattcaatta  24377600                                                                            <---------YAB1                                                                           <---------AHL20(2)                                                                      <---------AHL20(2)          ---                                                                      --------->AHL20(2)    ---------                                                                      --------->AHL20(1)    <--------             --------->AHL20(2)                                       <---------AHL20(1)    <--------        --------->ZAT14               --------->YAB1               --------->YAB1           ---------    --------------->AtSPL8        <---------AHL20(2)              <---------AHL20(2)<-------TEIL  <--  --------->MYB52(1)          --------->AHL20(2)           <-----------GT1 --------->AHL20(2)  <----- ------->ANAC46         --------->ANAC46    <---------MYB46(3)   --------->AHL20(2)--------->CCA1(2)   cacataccagtacaatattatgttctacacaaatatttattcacaatggttacgaagtatataaccatataataaattttaatagatacacaaatatttt  24377700      --------->MYB46(3)     --------->ANAC46     --------->ANAC58     --------->ANAC58     >>>>>>>>>>>>>>>>>LFY ------------>AtSPL8                                                                               -- >ARR11(3)                                                                         ------>MYB46(1)<-- -ARR11(3)                                   --------->MYB52(1)                    ------>MYB83 ----- -AHL20(1)                    <---------ARR14(2)                                  --------->WOX13(1) >AHL20(1)     --------->ICU4 --------->ARR14(2)                                --------->MYB46(3)--- -------------AtSPL8     <-----------GT1   --------->MYB46(3)                 <-----------GT1<------- ----AHL20(2)  <---------YAB1 --------->ARR11(3)        <-----------HVH21  <---------REM1(1) <-------   tatgtacaaccaatgtcatgtttaatattacaaatcttggtctgaacaaacgtatagaggtcatagacatccactaggtgtaaccaatccaagttgctta  24377800                                                                  <---------ARR14(2)    --------->ATHB12                                   <---------ANAC46            <----------DOF2 ------->ANAC46                                        <---------ANAC58           --------->HSFB2a(1) -------HSFB2a(2)                                   <---------WOX13(1)            <---------HSFB2a(1) --->P                             --------->At5g28300 <---------ANAC58    <---------AtLEC2 ------>HSFB2a(2)            <----------DOF2      --------->ATHB12--------->ARR14(2) --ANAC58               <---------At4g35610      --------->AHL20(2)       --------->ZAT14   <-------- --ANAC58            <----------DOF2             <---------AHL20(2)       <---------ZAT14   ---------   ccagaaacattggtgcaagaagtctttgctgcttcaccgtaagaagttagattaattgcctgcattcgaatcccagtgcatgggactttctcactgcaat  24377900                                             --------->AHL20(1)                         <---------ICU4                                             <---------AHL20(1)                        <---------AHL20(2)                                  <---------ICU4                                     --------->YAB1                                 <---------ATHB12                                   --------->AHL20(2)                                 <---------YAB1                                     <---------AHL20(2)   <---------YAB1                --------->ICU4                              ------>ZmHOX2a(1)  --------->AHL20(2) <---------ANAC46        <---------ARR11(3)            ----------->RAV1(2) -ZAT14         <-----------RAV1(1)          --------->AHL20(2)<---------YAB1--------->LBD16   <----- >ZAT14   --------->WOX13(1)    <---------TOE1(2)<-----------GT1      ------>ZmHOX2a(1)<---------YAB1   ccatttttatagcaatctctgtggccgatgttcccatgattccactatatattacatcgtttattttgattcctgactcctgaaaatttataatttcata  24378000  Previous    Next  AGI:  At1g65560.1    Description:  allyl alcohol dehydrogenase, putative. similar to AT-AER (ALKENAL REDUCTASE), 2-alkenal reductase [Arabidopsis thaliana] (TAIR:AT5G16970.1); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT3G03080.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62492.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085) Range:  from: 24375050    to: 24377461    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g65570.1    Description:  polygalacturonase, putative / pectinase, putative. similar to polygalacturonase, putative / pectinase, putative [Arabidopsis thaliana] (TAIR:AT3G59850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44461.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Parallel beta-helix repeat (InterPro:IPR006626); contains InterPro domain Glycoside hydrolase, family 28; (InterPro:IPR000743); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 24377761    to: 24379509    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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