Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->ATERF1(1)                                                               <------NtERF2                                                              ------>NtERF2                                                              <---------ATERF1(1)                                                              <---------DEAR4(2)                                                              <---------ORA47(2)                                                             <---------DEAR3(1)                                                             <---------RRTF1(3)                                                             <---------RAP2.3(3)                                                             <---------RAP2.3(2)                                                             --------->DEAR3(1)                                                            --------->ATERF1(1)                                                            <------NtERF2                                                            <---------ABI4(1)                                                           ------>NtERF2                                                           <---------ATERF1(1)                                                           <---------ERF1                                                           <---------RAP2.3(1)                                                           <---------RRTF1(1)                                                          <---------ANAC46                                                          <---------ATERF1(2)                                                          <---------DEAR3(1)                                                          --------->ATERF1(2)                                                          <---------RAP2.6(2)                                                ----------->HVH21 <-------GAMYB                                               <-----------HVH21 <---------MYB46(3)                                              <---------ANAC58<---------ERF1                                              <---------ANAC58<---------RAP2.3(1)                                          --------->ATERF1(1)<---------ANAC46                                        <---------ANAC46  <---------RRTF1(3)                                       <------NtERF2      <---------RRTF1(2)                      ---                                       <---------LBD16    <---------RAP2.3(3)                 <------                                       ------>NtERF2  <-----------HVH21                       =======                                       --------->At4g35610<---------RAP2.3(2)                 ------>ZmHOX2a(2)                                      <---------ATERF1(1) <---------bZIP60(1)               <--------            <---------YAB1            ------>NtERF2<---------ANAC58                         ---------         --------->ICU4              <---------DEAR3(1)   <---------O2         <------ZmHOX2a(1) ----    <---------ANAC55(2)             --------->LBD16<---------ANAC58            ======================    --------->ANAC55(2)             <---------LBD16<---------ANAC46 <---------MYB46(3)    ----------- -->ANAC58<---------ICU4          <---------LBD16  <---------bZIP60(2)         ======================HOX2a_HOX2a -->ANAC58--------->YAB1     <-------TEIL <------NtERF2----------->HVH21       ======================   atcaatacataatcatgactcatcgctaaaatacatcccgcggcggaagcgtgacctgtgacggcggcgattgttggcataggaagagagattagatcgg  24365300        ------>ZmHOX2a(2)      --------->ARR14(2)      <---------AGP1      --------->ARR11(3)      <---------ARR11(3)      <---------ARR14(2)      <-----------ARR10     <------ZmHOX2a(1)   <---------TOE2(3) --->NtERF2                                              --------->DAG2      <---------HSFB2a(2) ---DEAR3(1)                                            ---------->DOF2   <---------MYB52(1) ===========HOX2a_HOX2a                    --------->ARR14(2)     ------>ZmHOX2a(2) -ARR14(2)        <---------ANAC46         <---------ARR14(2)    <------ZmHOX2a(2) >ARR14(2)        <---------ANAC58        ==============================HOX2a_HOX2a ----->DEAR3(1)   <---------ANAC58        <------ZmHOX2a(1)     --------->ARR11(3) ==============HOX2a_HOX2a                ===============================HOX2a_HOX2a    <---------At5g28300 >ARR10<------ZmHOX2a(2)       ------->GAMYB  ----------->HVH21 <---------ARR11(3)     <-----------GT1 =============HOX2a_HOX2a   ----------->RAV1(1)      --------->At4g35610<---------MYB46(3)  ---------   cgactaaggatctaagttttgcgtccattacaacagagagagaaggatttgactcggctaaagcgagatcgtagccgttggagaagaatttaccatctga  24365400                                               <---------MYB46(3)                                              <---------WOX13(1)                                              <--------P                                     ------>ZmHOX2a(2)                                 ----------->HVH21       <---------At4g35610                                ------>ZmHOX2a(2)        --------->At4g35610                              <---------AGP1<------MYB83<---------ANAC46                            <                              <---------ARR14(2)     --------->ALFIN1           <------MYB83        -                         -------->HAHB4 <---------ARR14(2)                      <------MYB46(1)    <-                ----------->GT1<---------At4g35610 <---------MYB46(3)           <---------ANAC46   --             --------->ATHB12 ------->TEIL  <------MYB46(1)                    <------MYB46(1)     <-            --------->ICU4    --------->ARR14(2)  <---------AtMYB61            <------MYB83       ---     --------->ICU4      --------->ATHB12  <---------AtMYB61                 <--------P <---------DEAR3(1)     <---------YAB1     --------->ICU4  --------->ARR14(2)                <---------TOE2(3)       <-- -->RAV1(2) <---------YAB1 <---------WOX13(1)<-------GAMYB                --------->MYB59  --------->ALFIN1   tgttgtgatgagtactgattgtgaaaatgatggatctgatcggatttggttgatggtggagcggagagagtcgagtaaggttgggtttagacggtgttcg  24365500      <---------MYB52(1)     <---------DEAR3(2)    <---------DEAR3(1)   <---------LBD16   --------->ATERF1(1)   <------NtERF2  <---------RAP2.3(1)  ------>NtERF2 --------->DEAR3(1)                                                                 --------->ATHB12 <---------DEAR3(1)                                                             <---------AHL20(2) ------NtERF2                                                                 <---------YAB1 -------->ATERF1(1)                                                         <---------ICU4 --------ATERF1(1)                                                         <---------YAB1 ---->NtERF2                     <---------ANAC55(2)                       --------->ICU4 ----------HVH21              <------ZmHOX2a(2)                        <---------WOX13(1) ------>DEAR3(1)      ---------->DOF2       <---------ATHB12    <----------DOF2--------->AHL20(2) -------DEAR3(1)   <---------YAB1--------->ANAC55(2)          ------>ZmHOX2a(1)<---------AHL20(2)   -   ccgtcgccggtgagttttagtatgaaaagacgatcacgtttctctaatgaacacatttctcttcctctttgtgactgattattaaatgatttggctagta  24365600                                                                                                    <                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                 --------->TOE2(3)                                              <----              <-----------HVH21--------->ARR11(3)                                               -----         <-----------HVH21     <---------ARR11(1)                                ----------->GT1-----         <-----------TGA1      <-----------ARR10                <---------AHL20(1)              <----        --------->YAB1         <---------ARR11(3)               <---------ARR11(3)     <---------ICU4 --------->DOF2               <---------CCA1(2)         *TSS    --------->ARR11(3)     <---------GLK1(2)   gtaaaagaaatcgtcatgtcaactaatacatcatatcttagcacatatcaaatctaattttgttgatatattcaaacacaaaaatgtaagaatttcaaac  24365700              <---------ARR11(3)              --------->GLK1(2)              --------->ARR11(3)         --------->ANAC58         --------->ANAC58                          --------->AHL20(1)         ----------->GT1                           --------->ARR11(3) ------------CBF                                   <---------ARR11(3) ------------AGL15                                 <---------AHL20(1) ----------->AGL15                              --------->AHL20(2) -------------AG                            ---------->DOF2 ------------>AGL1                    ------------>CBF          --------->ARR14(2) -------------AGL1                    <---------ATHB12          --------->ZAT14                     - ------------>AG                    --------->WOX13(1)          <---------ZAT14                     - -------------AGL2                 --------->AHL20(2)       --------->YAB1                         <- ------------>AGL2                 <---------AHL20(2)   <---------AHL20(2)                        <-- ------------>AGL3       ----------->GT1   --------->AHL20(2)   <---------ARR14(2)       <---------ANAC58 -------------AGL3 <-----------TBP--------->AHL20(2)--------->AHL20(2)   --------->YAB1  <---------ANAC58   catattgggaaacgaaaatctatatataagtaaaaaataaatcaataaaagaaaatatttattcagaatactgcatcataagttgtattgggcttggaat  24365800         <---------MYB52(1)       --------->MYB59  <---------MYB52(1) --------->TOE2(3) ---------------->AGL1 -------->ANAC55(2)         ----------->RAV1(1)                           ------>MYB83 --------TOE2(3)  --------->ANAC58                  ---------->DOF2       ------>MYB46(1) ---------GT1     --------->ANAC58         --------->AHL20(2)  ---------->DOF2<-------TEIL      -----   ttacgttattcggtaattgcaagcccaatacaacatatgatgcaaaaaaataccaaaagcccttctaaaggagaccaagcttcatgaagaaaccagtaat  24365900                                           ------>ZmHOX2a(1)                                   <---------AHL20(1)                                   --------->ARR11(3)                                   --------->AHL20(1)   --------->KAN4(2)                                   <---------ARR11(3)  <---------KAN4(1)                               <---------YAB1         ------->TEIL                             --------->YAB1--------->At4g35610                            <---------YAB1 <---------At4g35610        <----------DOF2            ---- ---->ICU4     <-----------HVH21--------->YAB1     <---------YAB1<----------DOF2             ------->TEIL   gttgaaaacaaaaaatgtgtcaagagacttattatgatatatttcctctgaatatgaatgttcttctcttttctttactagtagacaaaaacatgaacca  24366000                                                            <-------TEIL             <---------ANAC58                        <---------MYB46(3)             <---------ANAC58                        <---------REM1(1)                             --        --------->HSFB2a(1)                        <---------ANAC58                <---------ARR11(3)        <---------HSFB2a(1)                        <---------ANAC58              <---------At4g35610  ---------->DOF2    ----------->HVH21             <---------ANAC46        <---------At4g35610    --- ----->AtLEC2<---------ANAC46                      <-------GAMYB           --------->At4g35610    ---   tgaaaaaagaaggtttcgtctatatgacacaaaaacaaacaatctcaagacttggttgtaggctcgtctgtttcttcagcttcagcatcttcaatctcgc  24366100                                                                         --------->GLK1(2)      --------->ZAT14                                                    --------->ARR11(3) --------------------->TaNAC69(2)           --------->TOE2(3)            <---------ARR11(3) ------>ANAC58                             <----------ID1          ----------->GT1 ------>ANAC58                <-----------GT1              --------->YAB1<-----------ARR10   tcgctaacttcactaagtcttccaccagtattttgccatctaaaaaccacaaaaacttccatcagaaaaccgaaaaatctaagtagagaagttggaaatg  24366200  Previous    Next  AGI:  At1g65520.1    Description:  enoyl-CoA hydratase/isomerase family protein. similar to enoyl-CoA hydratase/isomerase family protein [Arabidopsis thaliana] (TAIR:AT4G14430.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82361.1); contains InterPro domain Crotonase, core; (InterPro:IPR001753) Range:  from: 24364695    to: 24365656    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g65540.1    Description:  calcium-binding EF hand family protein. similar to calcium-binding mitochondrial protein-related [Arabidopsis thaliana] (TAIR:AT3G59820.2); similar to calcium-binding mitochondrial protein-related [Arabidopsis thaliana] (TAIR:AT3G59820.1); similar to H0306B06.8 [Oryza sativa (indica cultivar-group)] (GB:CAH67493.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46335.1); similar to hypothetical protein OsI_007861 [Oryza sativa (indica cultivar-group)] (GB:EAY86628.1); contains InterPro domain LETM1-like (InterPro:IPR011685); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-h Range:  from: 24366045    to: 24369674    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version