Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <-------TEIL                                                           --------->MYB52(1)      --------->DAG2                              ---------->DOF2        <---------ICU4     ---------->DOF2                       --------->DAG2         <---------TOE2(3)                 -   <---------AHL20(2)      <---------YAB1 ---------->DOF2         <---------TOE1(3)               --- ------ANAC55(2)   <------ZmHOX2a(1)    <------ZmHOX2a(1) <---------AHL20(2)<-----------GT1     <---- ----->ANAC55(2) <---------TOE2(3)     <----------ID1    --------->ICU4 --------->ICU4    <---------TOE2(3)   agtattaaaaagttcgtttgaggaaaactattatttgcaataggaaaagctcaaaagtatttattgtgaaggtaagaattacaaaacgaattgagatagt  24362700                                                                                           --------->YAB1                                                                                         --------->ANAC58                                                                                      --------->WRKY18(1)                                                                                     <-----------HVH21                                                                                    <---------At4g35610       <----------ID1                          ------>ZmHOX2a(2)                    --------->At4g35610       ----------->GT1                       --------->ARR11(3)                 <-----------HVH21     ---------->DOF2                        --------->YAB1                   ---------->DOF2 ---------->GT1              --------->At4g35610                             ======================== ------->DOF2                <---------At4g35610    <---------ARR14(2)<---------TOE2(3)  --------->ANAC58 -----ZAT6        --------->AHL20(2)       <---------YAB1           ---------->DOF2--------->MYB59   gaaagtaaaaagaaaaaaaaaaaaatagttatgctgacatatactatgatcgtggatagtgagactaatataaaggtactaaagtcaggtcaagcatatg  24362800            --------->ZAT14            <---------ZAT14          ----------->GT1          --------->TGA1a          <-------GAMYB          =================================MYC_MYB        <---------ALFIN1      <---------YAB1      <-----------GT1       --------->YAB1 <---------AHL20(1)        <---------YAB1                          ---------->DOF2 --------->AHL20(1)        --------->ICU4                        --------->ANAC58          ---------- --------->ARR11(3)      <---------ICU4                          --------->ANAC58 <---------YAB1 <---------ARR11(3)      --------->YAB1                   <---------ICU4   <---------TOE1(2) ===================bZIP_DOF<---------ICU4<---------YAB1--------->ARR11(3) <---------TOE2(2)   aaatattttcacacttcagtcgtttgatcatgatgactgttgttatattagagtaatagataatggcaagaaagtcgtatgtttctaatagattagttaa  24362900                                                                                     --------->ARR14(2)                                                                              ------->TEIL                                                                              <---------TOE2(2)                                                                              <-------TEIL                                                                              --------->SPL7                                                                            --------->TOE1(2)                                                                            <---------SPL7                                                                           --------->ANAC58                                                                           <---------ANAC58                                                                          <-------TEIL                                                                          --------------->AtSPL3                          <---------ATHB12                                <---------TOE1(2)                        --------->WOX13(1)         <---------AHL20(2)     --------->SPL7                  --------->HSFB2a(2)          <---------ICU4           --------->TOE1(2)                  <---------HSFB2a(2)          <---------AHL20(2)       <---------SPL7                 <---------LBD16               --------->AHL20(2)       --------->TOE2(2)                ----------->RAV1(2)            --------->ATHB51        <---------ANAC58            <---------ARR11(3)                --------->ICU4           <---------ANAC58            --------->ARR11(3)             --------->AHL20(2)         <---------------AtSPL3            --------->GLK1(2)              <---------YAB1<---------GLK1(2)------->TEIL           --------->CCA1(1)           --------->YAB1---------->DOF2 --------->MYB52(1)           --------->RVE1(1)    <-------MYC3  <---------YAB1         <---------DOF5.7(2) --------->LBD16   <xxxxxxxxxxxxxxxxsmallRNA(i) ------->MYC3--------->YAB1--------->GLK1(2)<---------ANAC58 <-------- ->GT1   --------->AHL20(2)--------->YAB1  <---------AHL20(2)<---------YAB1--------->ANAC58<---------   aaaaaaaaaaaaaaaatcttctggagcaatcaaacgtgtaatcatataattatttaaaagaatcttatagataacgtacgtacgtagaaaccgcgttatg  24363000                                                                                                    -                                                                        <---------WRKY38(1)        --                                                                       --------->WRKY18(1) <------ZmHOX2a(2)                                           --------->AHL20(2)          ------------>CBF  --------->At4g35610                                           <---------AHL20(2)        <------MYB46(1)  <------ZmHOX2a(2)  --------->AHL20(2)             <----------ID1  --------->ANAC46    <------MYB83<------ZmHOX2a(2) -- -MYB52(1)         --------->AHL20(2)     --------->AHL20(2)     <-----------RAV1(1)--------->At4g35610 -DOF2   ----------->GT1     ---------->DOF2<---------YAB1   ----------->TBP   <---------GLK1(1)  <--   ttcttaaaatatggtttttatgtaaatagcataaagaaacaaaattaaaataggccatggtctatatatgttggtcaatagagatcagatcagatcaaac  24363100            --------->AHL20(2)    ----------->GT1                                                               <----------DOF2  <---------ANAC46                         <--------P                 <---------YAB1   ------>ZmHOX2a(1) -------->REM1(2)                       <---------TOE2(3)       <---------YAB1  <---------DAG2 --------->HVH21                        <---------YAB1   <------------------------ANAC81 --------->TGA1                      <---------ARR14(2)  <---------CCA1(2)   <-----------GT1    ----- ---------HVH21 *TSS              --------->MYB46(3)   <---------CCA1(2)   <-----------GT1      <----   cgtgacgagaaaaaaaaaatgggttcgaagacatcaacaaatatggttgctcttctcttatctcttcttattctgattttcactctttcctctcaagtta  24363200                                                                        --------->YAB1                                                                        --------->ATHB12                                                                       <---------ATHB12                                                                       --------->ICU4                                                                     --------->WOX13(1)                                                                  --------->ANAC46                                                                  --------->ANAC58             ------                                                             <-----------GT1                  -------                                                        --------->AHL20(2)            --------->ANAC58                                         ------>ZmHOX2a(1)<-----------GT1       ------>ZmHOX2a(2)              --------->ANAC46          --------->TOE1(3)<---------AHL20(2)    <------ZmHOX2a(2)   <------NtERF2                        --------->TOE2(3)--------->AHL20(2)   <---------ARR14(2) ----->DOF2 --------->REM1(1)--------------->AtSPL8     <---------AHL20(2)    --------->ARR14(2) -----DOF5.7(2)             <--------P<---------YAB1<---------YAB1--------->ANAC58    --------->ANAC58   aagtcgtcgaggctacaagtcgcaaacttggtaagtacttatccttagacgcttataatttaatcacctcgcaatcatcggatcgcataagctaatatgt  24363300                                                                                --------->ANAC58                  <---------TOE2(3)                                    <---------ANAC46             --------->ATHB12                                          <---------ANAC58             -------->HAHB4                                            <---------ANAC58            <---------YAB1         --------->AHL20(1)       --------->ZAT14     --------->ANAC46 ---- <---------AHL20(2)                --------->AHL20(2)       <---------ZAT14     --------->ANAC58 <--- --------->AHL20(2)                <---------AHL20(1)       <---------ZAT18   --------->MYB52(1) <--- --->TOE2(3)--------->ICU4         <---------AHL20(2)       --------->ZAT18 <---------MYB52(2)   ---- ---->GT1 --------->YAB1          --------->AHL20(2)       xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<------   taattaaaccaaaaatgattaagaaattcacttgaattttatttgttcacctatgcgatttgtgcacttgatgtcgtagcaaacggaaggcccatcgtgt  24363400    ------>NtERF2    --------->LBD16    --------->At4g35610                                           ------>ZmHOX2a(1)   --------->ANAC46    <---------At4g35610                                      <---------At4g35610  <---------LBD16  --------->ALFIN1                                             --------->At4g35610 ----->ZAT18  <------ZmHOX2a(2)             >>>>>>>>>TBF1                <---------HSFB2a(2) ------ZAT18 <---------ARR11(3)     <---------ANAC46   ------->TEIL      --------->LBD16 ------ZAT14 --------->ARR11(3)   ------->TEIL    --------->MYB52(1)     --------->HSFB2a(2)  ------- ----->ZAT14xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   --------->ICU4       ------>ZmHOX2a(1)     <-------- ---ANAC46--------->HSFB2a(2)  --------->AtLEC2--------->YAB1  <---------DOF5.7(2) ----------->RAV1(2)   ggactccggcatctagatcatgtggagcttcccatgcatcgtggaagaagaataatggaccttgtaaacgtcctccgagaacagctcctgcttcttacaa  24363500                                                        --------->ATHB12                                      <------------------------ANAC81          --------->TOE2(3)       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     ---------->DOF2             <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   ------>ZmHOX2a(1)             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->TOE2(3)           <------------------------ANAC81  --------->TOE1(3)     <-----------GT1                <---------HSFB2a(1) -->REM1(1)  ---------->DOF2 <---------MYB52(1)      <---------GLK1(2)   <---------MYB52(2) ---GT1   --------->TOE1(3) <------------------------ANAC81  <---------At4g35610               <-----   ctctccttaaaaccataaaacacatttttctgttttttttttttttttttttttggaatctttggctgatttgaaacaaacaaattgtatggtttttgta  24363600  Previous    Next  AGI:  At1g65510.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G65490.1) Range:  from: 24363116    to: 24363744    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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