Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------AHL20(2)        --------->AHL20(2)     ----------->GT1                                                                    --------->LBD16    ----------->GT1                       --------->YAB1                                ------>ZmHOX2a(1)  <------ZmHOX2a(1)                    <---------------AGL15                     <---------ARR11(3) ---->ANAC46                           --------------->AGL15                     <---------GLK1(2) ---->bZIP60(2)                  <---------ICU4                                  --------->ARR14(3) ---------AGL15                  --------->ATHB12                                <---------ARR14(3) -------->AGL15                  --------->YAB1                                  --------->ARR11(3) ----------AGL1                 <---------ATHB12                          ---------->DOF2      <----- ----------AGL2                 <---------YAB1                   <-------TEIL    --------->ARR14(2) --------->AG                   --------->ICU4              <-----------GT1      <---------ARR14(2) --------->AGL1    --------->ICU4<--------ATHB1             <---------AHL20(2) ----------->ARR10   atcaggaagataaaatttgtaatgactatgttcaatgattacaaaaataagaagagacatatttacatacatgagaaaaagaagattttcctggtttatt  24344800                                                                                        <---------ICU4                                                                                        -------->HAHB4                                                        <---------YAB1                  --------->YAB1                                                    --------->GLK1(1)                  <---------ATHB12                                                   <---------ARR11(3)       --------->ZAT6                                                   --------->ARR11(3)      <---------TOE2(3)                <---------------AtSPL3    --------->AHL20(2)              <-----------GT1 <---------YAB1       <---------GLK1(1)                  <---------AHL20(2)        <------ZmHOX2a(1)  --------->ICU4 ----YAB1 --------->TOE2(3)  <---------AHL20(2)---------->DOF2     ----------->GT1    <---------TOE2(3)   tttgggatgaaatctcaatgtgtacgaatatttagttgtttgattaaaataaagatttctaattaagagaggaaattaacaataggctaatgatgatgtc  24344900                                                                                                <----                                                                                                <----                                                                                <---------TOE1(3) ---                                                                                <---------TOE2(3) ---                                                                           <---------YAB1    <-------                                                                       <---------ANAC58     <--------                                                      <---------LBD16  <---------ANAC58<---------DAG2                                         <---------YAB1                <---------ANAC46<----------DOF2   <----------DOF2                 <---------YAB1    --------->ALFIN1 <------NtERF2   <--------------   ttaatcttttttttttttttttttttgatgatgtcttattgttatgctggatgagttgggggactgcaaggtggcttcttataaggttcctttttctggg  24345000   <---------DAG2   <----------DOF2  <---------DAG2 -----ANAC58 -----ANAC58        <---------DAG2 ------>ATERF1(1)   <----------DOF2                         ------>ZmHOX2a(1) ------>PCF5  <---------ANAC58                          <XXXXXXXXXXXXXXXXXXXXMIR774B ----RAV1(1)  <---------ANAC58 <----------DOF2     --------->ATHB12      ------>ZmHOX2a(1)          < -LBD16   <---------ANAC58    <---------ANAC58    <---------AHL20(2)<---------At4g35610    <---------TOE2(3) ---AGL3  <---------ANAC58    <---------ANAC58    <---------YAB1<-----------GT1          <---------AHL20(2)   gtcccctttttgacttgcttcgctttactcttgctttcatttggacaacaatttcattgctcctattttcatctccttctctattccctaatttatgttt  24345100                                                       --------->ANAC55(2)                                                --------->ARR11(3)                            <---------YAB1      --------->ARR14(2)                           <-------                         --------->ICU4         <-----------ARR10                 ------>ZmHOX2a(2)             --------->ANAC58                   --------->GLK1(2)                 <---------MYB59             --------->ANAC58  ------->TEIL     <---------ARR11(3)    --------->ARR14(2)    <--------           ---------->DOF2--------->YAB1        <---------ARR14(2)    <---------ARR14(2)    ---------    ------------------------>ANAC81            <---------GLK1(2)    --------->LBD16         ---------    ------->TEIL   ---------->DOF2     --------->AtLEC2--------->ANAC46         <---------ARR11(3) ---------------------WRI1<---------ICU4   ---------->DOF2--------->YAB1        --------->ARR11(3)  -   tagatgaatcaaacaaagcaaaaaagaattatgaatctttcatacaaaagaatcttcacataataacatccgaatattgtatgatctaactaaacctaaa  24345200                                           --------->ANAC55(2)                                           --------->ANAC58                                           --------->ANAC58                                         *TSS                                         --------->MYB52(1)                                      --------->ANAC46                                      --------->ANAC58                                      --------->ANAC58                                     --------->WOX13(1)                                   <------ZmHOX2a(2)                                --------->LBD16                               <---------ANAC46                               <---------ANAC55(2)                               --------->ANAC55(2)                               --------->HSFB2a(2)          ----------->GT1                        <-                               <---------HSFB2a(2)         <-------MYC2                          <---                              <---------LBD16              ------->MYC2                        <----- --------AGL15                ----------------->AGL1       ------->MYC3                        ------ ---------AGL3              <---------ARR14(2)             <-------MYC3                   <---------At4g35610 >TOE1(3)                   --------->ARR14(2)        <---------MYB52(2)            --------->ZAT2 <- >TOE2(3)                 <---------MYB46(3)     --------->YAB1 <---------AHL20(2)  <---------ZAT2<-- ---------->GT1      <---------AHL20(2)--------->MYB46(3)------->TEIL            --------->DEAR3(1)<-   attggttaacatacttagtctatgttattggttccggatcaagcaacgtaatgaaaacgaacgtgttaaaatgttttgactcaccgagcttccgatgctt  24345300         --------->ETT(2)      <------MYB83      <------MYB46(1)     --------->MYB59                                                  --------->GLK1(2)     <---------AtMYB61                                    --------->At4g35610     <---------MYB46(3)                                   <---------ZAT2                      <------ <---------MYB46(3)                                       <---------At4g35610                ------>ZmHOX2a(1) --------ANAC58                                           --------->ZAT2                   <---------ANAC58 ------AtMYB61                                           <---------ARR14(2)                <---------ANAC58 -----DOF2----------------------->TaNAC69(2)           ----------->ARR10                <----------DOF2 --------------->WRI1                     <----------ID1 --------->ARR14(2)            <---------DAG2 --------ANAC58               --------->LBD16        <---------At4g35610               <---------ANAC58 -------MYB46(3)     <-----------GT1 ---------->DOF2 --------->At4g35610               <---------ANAC58 ------GAMYB      <----------DOF2 >>>>>>>>>TBF1---------->DOF2    --------->YAB1     ------>NtERF2   tggttgtttggtcgatatagcttttacttctccgaagaagaaagaagacaaaaggagcagagctgcgatgagaatcacgaagaatggtgcctttcctgtc  24345400                                                                               ------>MYB46(1)                                                                               ------>MYB83                                                                             --------->MYB46(3)                                                                             <---------MYB59                                                                            --------->ANAC58                                                                            --------->ANAC46                                                                            --------->ANAC58                                                                           -------->P                                                                           ------>MYB83                                                                           ------>MYB46(1)                                                                          --------->MYB55(1)                                                                         <---------MYB55(2)                                                                         <---------MYB46(2)                                                                         <---------MYB111(2)                                                                         --------->DEAR3(1)                                                                         --------->AtMYB61                                                                   --------->ARR11(3)                                                                   --------->ARR14(2)                                                                   <-----------GT1                   --------->DAG2                                  <---------ARR14(2)        <-----------GT1                                           --------->RVE1(1)    <---------ARR11(3)                                            --------->CCA1(1)    --------->ARR11(3)                                   ----------->GT1 <---------MYB111(1)   <---------CCA1(2)       --------->YAB1           --------->AHL20(2)   <---------MYB59 <-----------GT1 -----HVH21       ---------->DOF2                   <---------AHL20(2)   --------->MYB46(3)--------->ZAT6   attgtatatcttactgtccaaaaagcctataattttctaacttgttccatctatttatatagttaaaaatatccacctacccaacttgatttcacactaa  24345500                                                                                                  ---                                         <---------ANAC58                                        <---                          --------->ATHB12       --------->ANAC55(2)                             <---                          --------->ATHB51       <---------ANAC55(2)                            -----                         <---------YAB1  --------->ANAC55(2)                                    <----                       --------->ANAC58  <---------ANAC55(2)               ---------->ID1       <----                       --------->ANAC58  <---------ANAC58          <---------AHL20(2)           -----             <---------AHL20(2)       <---------MYB52(1)    <---------MYB46(3)         <-------TEIL            --------->AHL20(2)      ----------->GT1       <---------MYB52(1)         --------->YAB1<-            <---------AHL20(2)   ------------>MYB.PH3(1)------>ZmHOX2a(1)<-----------RAV1(1)   <-----   aatgttgaaagaaattaaatctggcacataattgaaaactgttacttgattacatgtcctgtttgttatttttttttgttgtttcaatattcattttaga  24345600                                    <---------CCA1(1)                                    <---------RVE1(1)                                   <---------ARR11(3) --->ZmHOX2a(2)                    --------->ARR11(3)               <-------TEIL              <------ ------RVE1(1)           --------->AHL20(1)                      --------->At4g35610          <------ ---ZmHOX2a(2)           <---------AHL20(2)                      <---------At4g35610          ------- ---->AGP1               --------->AHL20(2)             <---------AHL20(2)            ----------->GT1 -----ARR11(3)      <---------AHL20(2)                  --------->AHL20(2)     <---------------AGL15 -----AGP1          <---------AHL20(1)               --------->AHL20(1)        --------------->AGL15 ---->ARR11(3)      --------->AHL20(1)              --------->AHL20(2) --------->ANAC58      -------- ---------DOF2      --------->AHL20(2)  <---------AHL20(2) --------->ICU4      ====================== ----CCA1(2)  --------->YAB1       <---------ARR14(2)<---------AHL20(1)--------->ANAC58     ---------   tcttttcttactctgaacataataaaataaaatagaagatattttcttactgaaatatataattttgagatgcaaggtatactataaatagagaaaaagg  24345700  Previous    Next  AGI:  At1g65481.1    Description:  other RNA Range:  from: 24344689    to: 24345241    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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