Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->MYB46(3)                                                          ------->GAMYB                 ------>NtERF2     <----------DOF2                                   --------->MYB52(1)              --------->RAP2.6(2)  --------->ZAT6               --------->AHL20(2)   --------->HSFB2a(2)             --------->ANAC58 -----------GT1              --------->ANAC58  --------->HSFC1(2)                   --------->ANAC58 ----->YAB1                  --------->ANAC58  <---------HSFC1(2)                   --------->ANAC46 -->YAB1              <---------------AGL15   --------->ANAC58                    ---------->DOF2 -->TOE2(3)        ------>ZmHOX2a(1)          --------->ANAC58           ------>ZmHOX2a(1)--------->AtMYB61   agtaacactttcagtcttctccttcaatttcaagtaaatctcatctacaagcttcgacaacggcaaactcatttcctccattaacaaagccaccatcgaa  24327300                                  ------>ZmHOX2a(2)                                 <------ZmHOX2a(2)                                --------->ARR14(2)                                <---------ARR14(2)                                <---------ARR11(3)                                --------->ARR11(3)         --------->KAN4(1)      <---------AGP1         <---------HSFB2a(1)    <-----------ARR10        <---------KAN4(2)       --------->AGP1      ===================================HOX2a_HOX2a                         --------->DAG2      ==================================HOX2a_HOX2a                         ---------->DOF2      <------ZmHOX2a(1)--------->LBD16                               --------->ICU4<----------DOF2   --------->YAB1     --------->HSFB2a(2)            --------->TOE1(3)   --------->YAB1  <---------ATHB12    <---------HSFB2a(2)            --------->TOE2(3)--------->YAB1             <---   ttcaatgaggaacattcactaaatccagaaaacagatctgttctcttactcttatccataacttctctgaaataatcaaaaagccctttcatctctagat  24327400                --------->GLK1(2)          ------>ZmHOX2a(2)          =======================HOX2a_HOX2a         ========================HOX2a_HOX2a         --------->CCA1(2)        <---------ARR14(2)        --------->ARR11(3)        --------->AGP1                             <---------MYB52(1)        <---------ARR11(3)                         --------->ALFIN1                        --------->YAB1        --------->ARR14(2)                        --------->LBD16               <----------DOF2        <---------AGP1                           <---------ANAC46               ---------------------       <---------GLK1(1)             <---------GLK1(2)                      <---------GLK1(2)      ----------->ARR10      <---------At4g35610 --------->DEAR3(1)        <---------At4g35610  ------->GAMYB<---------GLK1(2)   ----------->ARR10 <---------DEAR3(2)    --------->At4g35610 --------->MYB46(3)        <-----------RAV1(2)------->GAMYB       --------->LBD16   ---------->ID1 ----TEIL<------ZmHOX2a(2)------>ZmHOX2a(1)  --------->MYB46(3)   <---------At4g35610     <---------YAB1   tcaacgacgagatctgagattctttctcctcagatgttagattctcaatcgccgtgggttctctcttccgcttattcagcttctttggctctatcatcgt  24327500                                                                                                   --                                                                                                  <--                                                                                   ==================                                                                                   ==================                                                                                   <------ZmHOX2a(1)-                                                                                 --------->LBD16  ---                                                                                <-----------RAV1(2)<-                   <---------At5g28300                               --------->GLK1(2)            <--             <---------YAB1 <---------HSFC1(2)                      --------->GLK1(1)             ---   --------->ARR14(2)       <---------HSFB2a(1)                  --------->HSFB2a(2)              ---   <---------GLK1(2)        --------->HSFB2a(1)                  <---------HSFB2a(2)              <--   <---------ARR14(2)       --------->HSFC1(2)                  <---------LBD16 <---------LBD16   --- >WRI1 <---------YAB1--------->DEAR3(1)                ----------->GT1         --------->TOE1(2)  <--   cttccgattctcattttcattcaccgtcgaaacttcgtccatcgcaaaaaaaaaaactagaaaaattcgggaatctataaacccaggaaaattgaaacaa  24327600     --------->GLK1(2)    <---------GLK1(2) <---------HSFB2a(2) --------->HSFB2a(2) ------->CCA1(2) -------ARR14(2) ======HOX2a_HOX2a =====HOX2a_HOX2a ----->ZmHOX2a(2)                            --------->ARR14(2) ------>ARR14(2)                             <---------ARR14(2)     <---------YAB1 -----ZmHOX2a(2)                  --------->At4g35610       --------->ANAC55(2) -------ARR11(3)                  <---------ZAT2            <---------ANAC46                        < ------>ARR11(3)                  --------->ZAT2            <---------ANAC58                        < ------>ARR14(3)      <---------ANAC58     ----------->ARR10<---------ANAC58                   ------ -------ARR14(3)      <---------ANAC58  --------->ALFIN1 <----------DOF2                       <----- ------>AGP1          <---------ANAC46<---------ANAC46  <---------ANAC58                      ------- -------AGP1     --------->ATHB12 <---------At4g35610   <---------ANAC58        <---------AHL20(2)  <   gatctagaatctaagaaatcgattgcgagaaacacgagctgagtggagatttgttgttcctttcgtgattttgattttggattttttttttctcagagtt  24327700                                                                           <---------AHL20(2)                                                                          --------->AHL20(1)                                                                          <---------AHL20(2)                                                                          <---------AHL20(1)   *TSS                                                              --------->AHL20(2) ---------TOE1(2)                                              ----------->GT1      <---------ARR14(2) ---------TOE2(3)                                              <------ZmHOX2a(1)    --------->ARR14(2) --->ARR11(3)                                                 ----------->GT1   <---------LBD16    <- ----ARR11(3)        >>>>>>>>>TBF1           <------MYB46(1)  <----------ID1 <------------CBF      <- -->GLK1(1)    >>>>>>>>>TBF1 --------->ALFIN1<------MYB83  ---------->DOF2--------->AHL20(2)       -- ---------TOE2(2) >>>>>>>>>TBF1--------->ALFIN1  ----------->GT1     <---------AHL20(2)      --------   cttaggtttttggagaagaagaagaagaagggagtgggaagatggataggtttgaaaaaaaaaaaggataaaaaaataaaattggggattcactaaaaag  24327800                ------>NtERF2                --------->LBD16                                                   <---------ATHB12               --------->ANAC58                                                  --------->ANAC58               --------->ANAC58                                                <---------ALFIN1               <<<<<<<<<<E2Fa                                                 <------NtERF2               --------->ANAC46                                               --------->ATERF1(1)              <---------LBD16                                                <---------RAP2.3(1)     <---------MYB52(1)                                                      ------>NtERF2    <<<<<<<<<<<<<<<<<<<<<<<<<E2Fa   --------->ARR14(2)                      <<<<<<<<<<E2Fa    <-------GAMYB                   <---------ARR14(2)                      --------->PCF2   --------->MYB52(2)             ----------->ARR10                         --------->ANAC46   <---------MYB46(3)         <---------MYB46(3)                           ---------->ID1 --------HSFB2a(1)           <---------ANAC46                          <---------MYB52(1) --------HSFC1(2)           <---------LBD16                        <---------At5g28300 ------->HSFC1(2)   <---------TOE2(3)<---------GLK1(1)            <-----------GT1--------->ANAC58 -->DOF2   <-----------GT1----------->HVH21------>NtERF2          <<<<<<<<<<<<<<<<<<<<<<<<<E2Fa    <-   aagggtcgttgattttcccgccaaggttttgacgggtggatttgcctccaaatgacaaaaatgcaattttactgtttggcgccactcaagttttggagaa  24327900                         ---------->ID1               <---------ANAC58               <---------ANAC58              <---------PCF2              --------->PCF5             ----------->TCP11(1)           --------->ALFIN1     ---------->DOF2                        --------->AHL20(2)         <--         <-----------RAV1(1) <----------DOF2     <---------ANAC46      <---------AHL20(2)         --- --------REM1(1)    <----------DOF2           --------->ALFIN1  ----------->HVH21        <-----------GT1   gatgaaggcctatgtgggcctgcttttgtttcttttaagcccaatatagtgggggaaacaattgggatgacatataaatagagactagaatttactaatt  24328000                        <---------AHL20(2)                  <-------GAMYB                                    ----------------->AGL1                  --------->At5g28300                   <---------AHL20(2)                  ---------             --------->ARR14(2)                         --------->AHL20(2)                  ---------             <---------ARR14(2)                        --------->YAB1                       <--------           --------->LBD16                         <---------AHL20(2)                      <---------ARR11(3)         <---------LBD16--------->AHL20(2)        --------->AHL20(2)            --------->ICU4 -------AHL20(2) ----------->GT1                  <---------AHL20(2)         --------->WRKY18(1) ------>AHL20(2)<---------ANAC46          <-----------GT1<---------AHL20(2) <-----------HVH21   ttaaatactcatgcggatgcggttatataaatagagactagaaattactcattttaattttaattttaagcctaatacggtcatggtgagcaagagctcc  24328100                                                                              --------->DAG2                                                                             --------->DAG2                                                                            ---------->DOF2                                      ----------->GT1                    --------->ANAC58                                   <---------TOE1(1)           --------->ARR11(3)                      --------->CCA1(2)     ---------->DOF2    <---------ARR11(3) >GLK1(1)            --------->ARR14(2)   --------->ANAC58     <---------ARR14(2) >At4g35610          <---------ARR14(2)   --------->ANAC58     --------->ARR14(2) -GLK1(1)  --------->YAB1      <---------YAB1     ---------->DOF2        --------->ANAC58          <-   gaatgaaaccgaataatactttggatacgatttatgaacgaggtaagaaagtgaaaggaaatgaagatttgtagcaagaaaagggagggagagaagatgg  24328200  Previous    Next  AGI:  At1g65470.1    Description:  FAS1 (FASCIATA 1). similar to unnamed protein product [Vitis vinifera] (GB:CAO39822.1); contains domain PTHR15272 (PTHR15272) Range:  from: 24323411    to: 24327703    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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