Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------->ANAC46   --------->HSFB2a(2)   ------>ZmHOX2a(1)                                         --------->ARR11(3)   --------->LBD16                                           --------->ARR14(2)   <---------------AGL15                                     <---------ARR14(2)   <---------HSFB2a(2)                                       <---------ARR11(3)  <-----------------AGL1                           --------->At4g35610 -------GLK1(1)                      <---------ARR11(3)     --------->RVE1(1) ------>GLK1(1)              --------->TOE2(3)     <---------At4g35610 --At4g35610             <---------GLK1(1)    --------->HSFB2a(2)                  <---------YAB1 ->At4g35610       ----------->GT1   --------->ARR11(3)     --------->CCA1(1) --------->ANAC46  ----- --RAV1(2)<----------ID1 --------->GLK1(1)    <---------HSFB2a(2)--------->At4g35610--------->YAB1   aattcctcgaaatggacaaaacagtagaaatccttgaaatatcatcttcttgaagcttacaaatatctgcttcgcttaacacactataattttgctacaa  24309500                                                          --------->ZAT6                                                         <---------TOE2(3)                                                         <---------YAB1                                                    <--------HAHB4                                                    --------->ATHB12                                                   --------->ICU4               <---------ICU4                                                   <---------YAB1              --------->ICU4                                   <---------AHL20(2)--------->TOE2(3)    ------>ZmHOX2a(1)                                  --------->AHL20(2)<---------ICU4       --------->TOE1(2)                   >>>>>>>>>>>>>>>>>LFY          --------->YAB1       --------->ARR11(3)        <---------GLK1(2)   --------->ARR11(3)   <---------ICU4    --------->DAG2 ---->ANAC46  --------->ATHB12------>ZmHOX2a(2) <---------ATHB12  ---------->DOF2           ---------   accaaaaacaaattcttcattagccattgtgatctataaaattttctcaaatcatcattaacattacaaaaaggtcctgcgattatttcagaaaccaaaa  24309600                                                                                            ---------                                                                                           --------->ARR11(3)                                                                                     --------->ANAC58                                                                                     --------->ANAC58                                                                                    <------NtERF2                                                                                   ------>NtERF2                                                                                   <---------ATERF1(1)                                                                                  ----------->HVH21                                                                                  <---------DEAR3(1)                                                                                  --------->DEAR3(1)                                                                                 --------->ATERF1(1)                                                                                 --------->RAP2.3(1)                                                                                 <------NtERF2                                                                                <---------ORA47(2)                                                                                <---------DEAR4(2)                                                                                <---------RAP2.3(1)                                                                                <---------ATERF1(1)                                                           --------->MYB52(1)   <---------RRTF1(1)                                                          --------->ICU4        ------>NtERF2                                                        --------->YAB1          <---------ERF1                                                      --------->LBD16          <---------RRTF1(2)                                                     --------->HSFB2a(2)       <---------DREB2C(2)                                                   <------ZmHOX2a(2)           <---------ANAC46                                                  --------->ARR14(2)           <---------RAP2.3(3)                                                  <---------ARR14(2)           <---------DEAR3(1)   <                                                  --------->ARR11(3)           <---------RAP2.3(2)  -                                    <---------TOE2(3)<---------HSFB2a(2)       <---------ATERF1(2)<--                        --------->AHL20(2)        --------->AGP1               --------->ATERF1(2)<--                      --------->TOE2(3)      <---------REM1(1)                <---------ABI4(1) <---- >AtMYB61          ----------->RAV1(1)      --------->ARR11(3)            ----------->RAV1(2) -------   cttcaatctctgtattggaaacaacattaatttcaattttggttaagatgtagatccagaataatggagaagagaaacctggcggcgacggaagataagg  24309700                                                   <---------At4g35610                                                   --------->At4g35610                                                --------->TGA2(2)                                                <------NtERF2                                               <-----------HVH21                                               ------>NtERF2                                               <-----------TGA1                                             --------->ATERF1(1)                                             --------->RAP2.3(1)                         <---------MYB52(2)  <------NtERF2                         --------->MYB46(3) <---------ATERF1(1)                             ---------                       <---------DOF5.7(2)  <---------DEAR3(2)                              ------>NtERF2            --------->ZAT2                  <---------ORA47(2)                              <--------            --------->At4g35610             <---------RAP2.3(1)                           <---------RAP2.6(2)            <---------At4g35610             ------>NtERF2             <---------ARR14(2)  --------->ATERF1(1)       --------->YAB1 <---------WRKY38(1)  <---------DEAR3(1)         --------->ARR14(2)  --------->RAP2.3(1)      --------->ICU4  <---------WRKY45    --------->ATERF1(1)     <------NtERF2           <------NtERF2 >CCA1(2)   <---------ZAT2------->GAMYB   <------NtERF2          <---------ORA47(2)      <---------ATERF1(1) ---------At4g35610   <---------WRKY12   <-----------HVH21      <---------DEAR3(1)       --------->ABI4(2) -------->At4g35610  --------->DOF5.7(2) <---------SPL7         <---------RAP2.3(3)      ------>NtERF2 -------WRKY12  --------->DEAR3(1)       ------>NtERF2         --------->ATERF1(1)      --------->ALFIN1 -------WRKY38(1)   <-----------HVH21    <---------ATERF1(1)  <---------ATERF1(1)       <---------DEAR3(1) -------HVH21  --------->At4g35610      --------->DEAR3(1)  <------NtERF2             <---------ANAC58 -->DAG2 --------->At4g35610         --------->ANAC46     <---------DEAR3(1)          <---------ANAC58   tcatcggaatcatcagcagcgtcgtcaacgaactcgtactcgccgtcggcgtcatcttcgtcggagtcggcgtaatcggagtagttttcggtgccgctgt  24309800                        --------->GLK1(2)                       <---------GLK1(2)           --------->ZAT2        <---------At4g35610    <-----------TGA1 ----------->ARR10                                         <----------DOF2   --------->YAB1    <---------TOE2(3)                          --------->TOE2(3) >At4g35610<---------At4g35610     <---------HSFB2a(2)          --------->TOE1(3) -At4g35610--------->At4g35610     --------->HSFB2a(2)      ---------->DOF2<---------GLK1(2)       *TSS   agaaatcgtcatcagcttccattgagattctcttcttctcgattcgatttcgatttcaaacacaaagcttaattttagatactttctctctctctcgtaa  24309900                                       --------->YAB1                                               -                                       <---------ICU4        --------->TOE1(3)                 ------                                      <---------ATHB51      <---------At4g35610                ------                                      --------->ICU4       <---------TOE1(3)           <---------AHL20(2)                                  ----------->GT1          <---------TOE2(3)          --------->AHL20(2)                                --------->DAG2     --------->At5g28300           ------------>CBF   -           ----------->GT1     ---------->DOF2    ----------->GT1        --------->ARR14(2)    ------   gaagacgtttggaagggaaaacgttttaatcgaaaaaggaataatggcaaaatggtaaattaagcttagccactaaatccccttccaattttatcccaag  24310000                                                         <---------TOE2(3) --------->ATHB12         --------->MYB52(2)            <---------ICU4                        <------ -------->ANAC58          <---------MYB46(3)            --------->YAB1              ---------->DOF2 --->ANAC58             <---------MYB52(1)    <---------REM1(1)                  <------ZmHOX2a(1) --->ANAC46  --------->ICU4         --------->AHL20(1) --------->ICU4 <---------ATHB12   ----------->GT1 -------->ANAC58 <---------AHL20(2) --------->AHL20(2) <---------ATHB51        <---------TOE2(3) --->ANAC58  --------->AHL20(2)     <---------AHL20(2) <---------ATHB12  ------->TEIL--------->DAG2   gcacgattagaagaaatatttaaaacgtttgtttcaaattttttggtgatgaaggcaataatgttttatccaatgaatatttaggataaagttgtatata  24310100                                                                                                  ---           --------->AHL20(2)                                                                     ---           <---------AHL20(2)                                                            --------->RAP2.6(3)           <---------AHL20(1)                                                           --------->MYB52(1)   --------->MYB46(3)                                                                   <---------DOF5.7(2) ---ARR14(2)<---------AHL20(2)                                 <-----------GT1        --------->DOF5.7(2)   tggcaacaactaataaaatttgttttgctatctctcgacttcttctcttgaaaatgttttttttttttcgaaatgaattgtttagatcgataacggctaa  24310200                                                                             --------->AHL20(2)                                                                           <---------ANAC55(2)                                                                           ----------->GT1                                                                         <---------ATHB12                                                                  --------->SPL7                                                                  <-------TEIL                                                                  ---------->DOF2                                                               <---------DEAR3(2)                                         --------->ANAC55(2)   --------->LBD16                <------                                     --------->YAB1           --------->ATERF1(2)         --------->AHL20(2)                              ----------->GT1                 <---------ATERF1(2)         <---------AHL20(2)                           <------ZmHOX2a(1)            ------->TEIL     --------->ICU4  --------->AHL20(2) -------->GT1           --------->DAG2   --------->ANAC58    --------->RAP2.6(3)         <---------AHL20(2) ------>YAB1           ---------->DOF2   --------->ANAC58   --------->MYB52(1)         --------->TOE2(3)   ttgtaatttcatgttcacaaaaacaaaaaggatggaaaatcataagtaatccaaaatgaacatgccggtacagcaataagtaaatagttcattaatttac  24310300                <---------TOE2(3)                       --------->MYB52(1)    --------->ANAC58        ----------->GT1                    --------->DAG2      --------->GLK1(2)        --------->ANAC55(2)               ---------->DOF2     <---------GLK1(2)            ----------        <---------ANAC55(2) --------->ANAC58          --------->ARR11(3)      --------->ANAC58   <--- -----GT1 <---------AHL20(2)--------->ANAC58          <---------ARR11(3)--------------------->WRI1  -   gagcttgattatgtaatttaggtgaaacagaagccaaacaaacaaaaagtattcaagataacgagattctaaaattttgtaagcatcgacttaaaaagac  24310400  Previous    Next  AGI:  At1g65430.1    Description:  zinc finger protein-related. similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT1G05890.1); similar to IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7) [Arabidopsis thaliana] (TAIR:AT2G31510.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83309.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44993.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64272.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contai Range:  from: 24304561    to: 24309899    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g65440.1    Description:  GTB1 (GLOBAL TRANSCRIPTION FACTOR GROUP B1); RNA binding / hydrolase, acting on ester bonds / transcription elongation regulator. similar to RNA binding / hydrolase, acting on ester bonds / protein binding / transcription elongation regulator [Arabidopsis thaliana] (TAIR:AT1G63210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18264.1); similar to SH2 motif; Alcohol dehydrogenase, zinc-containing; Resolvase, RNase H-like fold; Nucleic acid-binding, OB-fold, subgroup [Medicago truncatula] (GB:ABD32884.1); similar to hypothetical protein OsJ_018278 [Oryza sativa (japonica cultivar-group)] (GB:EAZ34795.1); contains InterPro domai Range:  from: 24310330    to: 24318236    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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