Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->MYB59                                                         <---------LBD16                                                       <-----------GT1                                                --------->ANAC46                                                --------->ANAC58<------MYB83                    <------ZmHOX2a(1)     --------->ANAC58     <---------AtMYB61                  --------->LBD16         --------->ANAC46   <---------MYB52(1)     --------->REM1(1)       <---------ARR14(2) --------->ANAC58<------MYB46(1)    --------->ATHB12 --CCA1(2)       <---------LBD16          --------->ANAC58 --------->LBD16--------->At4g35610   ttgcccttcaccactatctccaggaatagaagaaccagtgtctaacgcaaacgctattttccggtttggtcttcttatctgaaaactattggcaaaaaat  24301800                                                                ----------->GT1                                                        <--------ATHB1                                                        --------->ATHB12                             --------->KAN4(2)          <---------ICU4                            <---------ICU4              <------------ATHB5                         --------->YAB1                 -------->ATHB1                         <--------ATHB1                 --------->YAB1                         --------->ATHB12              <---------YAB1                         <---------ICU4                <---------ATHB12                 --------->ANAC46                        <---------ATHB12               <---------ATHB51     --------->ANAC58                        --------->ICU4                 --------->ICU4       --------->ANAC46   <-----                        <---------YAB1             <---------ATHB12         --------->ANAC58  <------                  ------>MYB83                   --------->WOX13(1)    --------->YAB1   --------->ANAC58                  ------>MYB46(1)            --------->ANAC46 <---------ZAT14           --------->ANAC58                --------->AtMYB61            --------->ANAC58 --------->ZAT18     --------->ANAC58                <---------MYB59              --------->ANAC58 <---------ZAT18     --------->ANAC46     <----------DOF2--------->MYB46(3) --------->AHL20(2)     --------->ZAT14     --------->ANAC58   gaagagacttttcaataaccaaaccaatgattatgcccaaattcaataagccaatcaatgattgtgcagaaaatcaaaacgcaaacgcaaacgctacctt  24301900                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                     --------->DAG2        <---------                                                                 --------->YAB1            <---------                                                                <---------YAB1  <----------DOF2                                      <----------DOF2         --------->YAB1    <---------DAG2     --                                    <---------HSFC1(2)   <---------ARR11(3)  --------->ARR11(3)<<<<<< -----DOF2<------ZmHOX2a(1)         --------->HSFC1(2)   --------->ARR11(3)  <---------ARR11(3)<----- ---DAG2<---------TOE2(3)          ------->TEIL  ------>ZmHOX2a(1)  ---------->DOF2   <--------------   ttcatgggataaggaaatgaagtgagagtaatggacgaagcttttattctcctatggaagacatttatcataaaggagagacctttttcaatttctagaa  24302000                                                                                   ----------->HVH21                                                                                  <-----------HVH21                                                                                  <-----------TGA1                                                                                 <---------bZIP60(1)        <---------ANAC46                                                         --------->ANAC55(2) -HSFB2a(2)                                                                      --------->ANAC46 >HSFB2a(2)                                                                      --------->bZIP60(1) >HSFC1(1)                                                                       <---------ANAC58 -HSFC1(1)                                                                       --------->ANAC58 -------AGL15                                                                    <---------ANAC58 ------>AGL15                                                                    --------->TGA2(1) --------AGL2                                                                    <---------TGA2(1) --------AGL1                                                                   <-----------STF1 --------->GT1                                                          <----------DOF2     <------ZmHOX2a(2) <ZML2  >>>>>>>>CAMTA3      --------->ANAC58                    <---------TOE2(3)<---------ANAC55(2) ----AGP1 ----------->HVH21 --------->ANAC46                    <---------TOE1(3)--------->ANAC58 -AGL15 <---------ANAC55(2) --------->ANAC58                --------->CCA1(2)  <-----------GT1   ctgggaaaacgcgtgaagcttgaatttgacaagccattagaaccagtctcgagttttctgagatttagggttttctttatattacgtcacagcgatctac  24302100                 --------->TOE1(3)                 --------->TOE2(3)                 --------->YAB1               --------->ARR14(2)               <---------ARR14(2)               ------->TEIL   --------->ARR14(2)               <-----------ARR10     --------->ANAC58               --------->GLK1(2)     --------->ANAC58                                    <----------DOF2               <---------ARR11(1)    --------->ANAC46                                   <---------ANAC58              <---------ARR14(1) --------->ANAC46                                  <---------ANAC58          --------->MYB52(1)  <---------ARR14(2)                                   <---------ANAC58--         --------->TOE1(2)   <---------CCA1(2)                       <------ZmHOX2a(1)  <---------ANAC58        <---------MYB52(2) --------->YAB1                <---------WOX13(1)       <---------HSFC1(2)      --------->MYB52(1)  <------ZmHOX2a(2)   ---------->DOF2 ------>ZmHOX2a(2)   --------->HSFC1(2)   --------->ANAC46 --------->MYB52(1)      <---------YAB1    ==============HOX2a_HOX2a <---------ANAC46   tagacacaaaacgaacgaatcttaacggatcatatccacaaggaatatgaaagaaccagattgatctaagaggagaatgcaagaagcttggcttgaagga  24302200                                   ------------>CBF                  <---------YAB1                            <---------WOX13(1)                   <---------ARR11(3)                          --------->ATHB12        <------------CBF  <-----------GT1   <---------ARR11(3)          <------MYB46(1)<---------YAB1       --------->DAG2     <---------GLK1(2)---------->DOF2 ---          <------MYB83   --------->ICU4     ---------->DOF2      --------->ARR11(3)   --------->ARR11(3) ------->ATHB12--------->ICU4    *TSS   --------->YAB1    <----------DOF2   <-------GAMYB   <--------   atcaatggagattggtgaagatgagtgatgattgagaaacaatgacaaaaggcattgaagctttttagattttcattctgttgaaaaagacattttactc  24302300                                                                        ----------->GT1                                                                  <---------AHL20(2)                                                                  --------->AHL20(1)                                                                  --------->AHL20(2)                                                                  <---------AHL20(1)                                                                 <---------------AGL15                                                              <---------YAB1                                                             --------->AHL20(2)                                                             <---------AHL20(2)                                                             --------->AHL20(1)                                                            --------->YAB1                                                           <---------ATHB51                                                         --------->WOX13(1)                                                        --------->AHL20(2)                                                       <---------ATHB12 <------MYB46(1)         <----      <----------DOF2                                --------->WOX13(1) <------MYB83            ----- --->ZmHOX2a(1)                               <------ZmHOX2a(1)--------->YAB1                   ----- ---GT1                         <-----------GT1     --------->AHL20(2) --------->MYB59<---------AHL20(2)   cttctactcttttttttgttctgaatttcaagttttacaaattttggaggacgattaatcaattataataaatttggtaattccacatattatttgaaaa  24302400                                                                                            ---------                                                                                           <---------SPL7                                                                                         --------->ALFIN1                                                                                        <-------PIF5                                                                                        ------->PIF5                                                                                       ==============                                                                                       <---------bZIP60(2)                                                                                       <---------ANAC58                                                                                       <---------TGA1a                                                                                       <---------ANAC46                                                                                       --------->TGA1a                                                                                       ==============                                                                                  --------->SPL7                                                                                <---------RAP2.6(3)                                                                                <---------SPL7                                                                               <---------ANAC58                                                                      ------>ZmHOX2a(1)<---------O2                                                                      <---------YAB1----------->HVH21                                                                     --------->TOE2(3) <---------ANAC58         --------->YAB1                                            <---------YAB1<---------MYB52(1) -----ARR11(3)   <---------MYB52(1)                            <----------DOF2 <---------ANAC58 ---->GLK1(2)   <----------DOF2                                ==================================bZIP_DOF ---->ARR11(3) --------->TOE2(3)                               <---------DAG2<------------------SPL14   tctcacaactatcaaaacctttagtctcgctctcttctctctctaacattcttcagagagggagactttatccttattctgccgttcggacgtggtccga  24302500                              <-----------RAV1(1)                                             -------                              <---------ANAC58                                                -------                              <---------ANAC58                                --------->ARR14(2)                          --------->GLK1(1)                                   <---------ARR14(2)                      --------->ANAC58                                       ------>MYB83     <------                      --------->ANAC58           <---------SPL7<---------ATERF1(2)          <--------                  <-----------HVH21  --------->LBD16           --------->ATERF1(2)       <---------MYB46(3)                --------->LBD16 <---------MYB52(1)             <---------RAP2.6(2)  ------>NtERF2                <-----------HVH21    ------>NtERF2 --------->SPL7<------NtERF2<-----------ARR10               <---------ANAC58<---------At4g35610 <---------LBD16       ------->TEIL   <---------AtMYB61               <---------ANAC58<-------GAMYB    <---------ANAC58------>NtERF2------>MYB46(1)<--------     <---------MYB52(1)   <---------GLK1(1)     --------->ETT(2)--------->LBD16     --------->LBD16    <-------GAMYB----------->HVH21  <---------ANAC46      <---------ANAC58   <---------CCA1(2)<------ >PCF5 --------->MYB52(2) <----------DOF2  <----------DOF2<---------ANAC58 <---------MYB59<---------- ===========MYC_MYB <---------bZIP60(2)   --------->MYB52(2)  --------->RAP2.6(3) <---------LBD16 ====================================bZIP_DOF   <---------ANAC58<---------RAP2.6(3)--------->ANAC46   tatcgccgttagtttagccgtgacacggctttccgttgccgcgttctttgtcgtccggtttcatgccggcttatgtaccaaatctccgcgatggtcagct  24302600                                                     --------->MYB52(1)                                  <---------ANAC58 --------->MYB46(3)                                  <---------ANAC58 --------->ANAC58                                 <------NtERF2  <------NtERF2                                 ----------------------->TaNAC69(2)      <---------ALFIN1          <---------MYB46(3) ----------->HVH21 -->At4g35610                   --------->MYB55(2) --------->ANAC58 -->ZAT2                        ------>NtERF2  --------->LBD16                  <----------DOF2 ---ZAT2                       <---------DEAR3(1) --------->SPL7              <---------DEAR3(2) -WRKY12                <---------At4g35610   --------->ANAC58              <---------ANAC46  ------- -WRKY38(1)<----------CDC5--------->MYB52(1)  --------->ANAC46        --------->WRKY18(1)     <------ ---At4g35610           --------->At4g35610   --------->ANAC58       <---------RAP2.6(3)    --------- -HVH21  --------->DEAR3(1)  ------->GAMYB   <---------LBD16         <-----------HVH21      <--------   ctcgtctagcaccgcttagcttcttcagcaacggtggctagctcttgcccggcacgaccggctattctagcggtcatggccggtttatgttcttctttaa  24302700  Previous    Next  AGI:  At1g65420.1    Description:  Identical to Ycf20-like protein [Arabidopsis Thaliana] (GB:O80813); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G56830.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G56830.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G56830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44991.1); contains InterPro domain Protein of unknown function DUF565 (InterPro:IPR007572) Range:  from: 24301143    to: 24302233    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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