Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------TOE2(3)      <---------YAB1                    --------->MYB52(1)     <---------AHL20(2)                    <-----------GT1       --------->YAB1                  <---------MYB52(2)      --------->AHL20(2)      <---------HSFB2a(2)                 <---------AHL20(2)      --------->HSFB2a(2)--------->ARR14(2)--------->AHL20(1)                   --------->DAG2 <-----      --------->HSFC1(1) <---------ARR14(2)<---------AHL20(1)                  ---------->DOF2------- ------->ANAC46  ------>MYB46(1)    --------->TOE2(3)              <----------DOF2  ----------->GT1 ------ALFIN1    ------>MYB83       --------->TOE1(3)     --------->TOE2(3) <-------GAMYB  <---------   cacttcatctagaaacaccaaataacgtttctgcaaaaccctaattatatttcttcgaaaccctagtttcttttttgctgttaaagtggaaaattacctt  24294300                 --------->ANAC58                 ----------->GT1                 --------->ANAC58            --------->HSFB2a(2)                    <---------ANAC46     <---------GLK1(1)                  --------->HSFB2a(2)     --------->GLK1(1)                  <---------HSFC1(1) ------>ZmHOX2a(2)                      --------->HSFC1(1)                 --------->ICU4 -----DOF2  <---------HSFB2a(2)         <---------HSFB2a(2)            <---------MYB52(1) -->TOE2(3) --------->LBD16          --------->ARR11(3)           --------->WOX13(1)                < --GT1    <---------LBD16            <---------ARR11(3)         <------ZmHOX2a(2)<-----------GT1   <-   tgatcggaaatctacgggaacgtaaacagccttgaagaagttctcgaagagagccttgtatttgggatcaatcggtagtgatttctcaatccagaggcca  24294400                                <---------ZAT2                                --------->At4g35610                                <---------At4g35610                                --------->ZAT14                     <------NtERF2                    ------>NtERF2                    <---------RAP2.6(3)                   --------->ANAC58                                                                --                   --------->ATERF1(2)                                                             ==                   <---------ATERF1(1)                                                             ==                   --------->RAP2.6(2)                                                            <--                   --------->RAP2.3(2)  <---------ANAC46                                          ---                   --------->RRTF1(3)--------->ETT(1)                                             ===                   --------->ANAC58<-----------HVH21                                             ----                   <---------ATERF1(2)<---------RAP2.3(1)                                        <---                   --------->RAP2.3(3)<---------ORA47(2)                                         <---                  --------->ERF1--------->ZAT2                                                   ----                  <---------RAP2.6(2)<---------DEAR3(1)                                          <---            <----------DOF2  <---------At4g35610  <---------MYB46(3)                             ----     --------->RAP2.3(3)<---------MYB52(2)<------NtERF2                                          ----   ------>NtERF2  --------->RAP2.3(1)<---------DREB2C(2)                       --------->At4g35610===   --------->ABI4(1)<---------ATERF1(1)<------NtERF2                      --------------------->WRI1   <---------ZAT18--------->ATERF1(1)<---------DEAR4(1)                  --------->ARR14(2)      <---  --------->DEAR3(1)<------NtERF2 <-----------RAV1(1)<---------YAB1      <---------ARR14(2)      <--- --------->MYB46(3)--------->DEAR3(1)<---------At1g77200      <---------LBD16  <---------At4g35610=== ---------At5g28300--------->RRTF1(2)<---------RAP2.3(3)      <---------HSFB2a(2)              ------ ----------GT1   <---------ATERF1(1)--------->ATERF1(1)       --------->HSFB2a(2)     --------->ATHB12   ttcaccgccctcatctttgggccgccactagcgctgctgtcggcgtagacgatggatgatagttctcggaagacggatttgagctcatcgattgaagaag  24294500        <------ZmHOX2a(1)    <------ZmHOX2a(1)                              <---------ANAC46  <---------TOE2(3)                     --------->LBD16 ---->ZmHOX2a(2)                       --------->ANAC46                                    --------->At4g35610 ==============HOX2a_HOX2a          <---------ALFIN1                                <------NtERF2 ===================HOX2a_HOX2a     --------->AtMYB61                              --------->LBD16 ----ZmHOX2a(2)               --------->ANAC46  <---------DEAR3(1)                 <---------ATERF1(1) ------>CCA1(2)          ------>NtERF2 <---------HSFB2a(2)                         ------>NtERF2<---- ==========HOX2a_HOX2a  --------->DEAR3(1)  --------->MYB46(3)                    --------->DEAR3(1) ----->ARR14(3)        --------->RAP2.3(1)--------->ARR14(2)                      --------->ATERF1(2) ------ARR11(3)       --------->LBD16 <---------LBD16                             <---------ATERF1(2) --------ARR10        <---------ATERF1(1) <---------ARR14(2)                      <---------DEAR3(1) ----->GLK1(2)       --------->DEAR3(1)--------->HSFB2a(2)                       <------NtERF2<------ ------ARR14(2)     <---------LBD16 --------->DEAR3(1) <---------AtLEC2          --------->ATERF1(1) ----->ARR14(2)   <-----------GT1  --------->ZAT2  <---------ANAC58              --------->RAP2.3(1) ----->ARR11(3)<---------GLK1(1)   <---------ZAT2  <---------ANAC58             <---------ATERF1(1) ==============HOX2a_HOX2a    --------->ANAC58 <---------At4g35610              ------>NtERF2-------- ------ARR14(3)--------->GLK1(1)  ------>NtERF2--------->At4g35610              <---------RRTF1(1)<-- ------AGP1   <-----------ARR10   <---------ATERF1(1) <-------TEIL              <---------RAP2.3(1) ===================HOX2a_HOX2a  <---------ALFIN1 <------NtERF2                --------->ANAC46------ ----->ARR10 <------ZmHOX2a(1)--------->ANAC58--------->MYB52(1)------>ZmHOX2a(2)<---------LBD16-----   atctgaggaaggagaggatttcaccggcgactaagccacctccggaaccagcggcgtgcatggtgatcgcagagtttattgacgccggcgagaagatgac  24294600                                               <---------O2                                               --------->bZIP60(1)                                               --------->O2                                               <---------TGA1a                             ------>NtERF2     --------->TGA1a                          ------->TEIL         <---------bZIP60(1)                       <---------O2  <---------ARR11(3)                       <---------bZIP60(2)     --------->bZIP60(2)   --------->GLK1(2)   --------->TGA1a         <---------bZIP60(2)  <---------GLK1(2)    <---------ANAC58        ==================================bZIP_DOF -----bZIP60(1)        <---------ANAC55(2)     --------->DEAR3(1) ---TGA2(2)            <---------ANAC58      <XXXXXXXXXXXXXXXXXXXXMIR3933        --------->YAB1 --->TGA1    <---------At4g35610     <-----------ARR10                <----------DOF2 -------MYB52(1)       <---------TGA1a<------ZmHOX2a(2)              <---------DAG2    *TSS ----->STF1<-----------RAV1(2)       --------->ARR11(3)  <---------ANAC58       <-------TEIL ---->bZIP60(1)   --------->CCA1(2) --------->YAB1       <---------ANAC58  <-----------GT1          -   gttagattccgactcagaagataagacgtgcctcccaaggatcatcgcgacgtcgttttgcttcttcatagcctttttcacattcatctttggtctctcc  24294700                                                                                               <-----                                                                                               ------                                                                                              xxxxxxx                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                            <--------                                                                                            ---------                                                                  --------->ZAT18           <--------                                                          <-----------TBP                 <xxxxxxxxxx                   --------->DAG2  <---------AtLEC2   <-------GAMYB                      <---------AHL20(2)                 ---------->DOF2 <---------YAB1      ----------->GT1                     --------->AHL20(2)         --------->ARR11(3) <------ZmHOX2a(1)     ------------>AtMYB77          <---------TOE2(3) <-- -------------->AGL15  --------->ALFIN1          ----------->HVH21<---------ZAT18    --------->ICU4   aactagatagagaacttgcaaaagggtggaggattatgcatggtctatggagggacagttatatatagtgaacaaatccattaagaaatttttaattatt  24294800                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------TOE1(3)               <-----------RAV1(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------TOE2(3)               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----YAB1             xxxxxxxxxxxxxxxx>smallRNA(i) --->ICU4            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxx>smallRNA(i2)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) >HAHB4             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -HAHB4             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) --ICU4           xxxxxxxxxxxxxxxx>smallRNA(i) ->YAB1       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --AHL20(2) <xxxxxxxxxxxxxxxxxxsmallRNA(si3) >ATHB1<---------ANAC58       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ->ATHB51   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2) -YAB1 <---------ANAC58  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) >ICU4 <---------ANAC46 <----------DOF2    --------->WOX13(1)                             <---------YAB1 -ATHB51   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                    ----------->GT1 xxxxxxxxxxxxxsmallRNA(le3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <----------DOF2 --------->YAB1 -------YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <---------ICU4    ----------->GT1      <---   attagggtttcttggaaaactagtcactttgcaatccaggtgtataaatcaaacacttaaaaatgactactttgcaaattgtaaatagtaatatgactac  24294900                                 <----------DOF2                           --------->YAB1                           -------->HAHB4                           <---------ICU4                           --------->ATHB12              <-----------GT1                          <---------YAB1                 <<<<<<<<<<<<<<<<<LFY                      --------->AHL20(2)           <---------AHL20(2)           <-----------GT1                 --------->ICU4  <---------DAG2    --------->AHL20(2)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                 --------->AHL20(2)               --------->AHL20(2)        <---------ARR11(3)        <---------YAB1<---------AHL20(2)          <---------AHL20(1)        <---------GLK1(2)     --------->ARR14(2)   --------->ICU4          <---------AHL20(2)        --------->ARR11(3) ----------------->AG--------->AHL20(2)     --------->TOE2(3)        --------->AHL20(2) -------DOF2     <---------AHL20(2)  <-----------GT1 <---------YAB1  <---------AHL20(2)--------->ANAC46   tttcccaaatatgtttgaaaaaattaaaatgattacttttcacttatctcaaattatttttacaatggaatataaatagatttttctatactaaacctct  24295000                                                                                                 ----                                                                                              -------                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                       --------->ANAC58    --------->YAB1                                      ---------->DOF2                  --------->ANAC58    <---------ICU4                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                <---------ATHB12   --------->AHL20(2)              ------->TEIL                        --------->AtLEC2 --------->YAB1   <---------AHL20(2)           <---------MYB52(2)          ------->TEIL        --------->ARR11(3)<--  --------->AHL20(2)          --------->MYB52(1)           <---------AtLEC2     <---------ARR11(3)<--  <---------AHL20(2)<---------ALFIN1--------->MYB46(3)   --------->AtLEC2 ---------->DOF2 --------->ICU4   gtaaattaatactcgataagttccacttcaaaaaacgaaccaaaggtcatatttcatccatgcatgttcgaacatgcaaagagaacttactaataatgtt  24295100 ----->MYB59                                                        <---------HSFB2a(1) -->ATHB12                              ---------->DOF2             --------->KAN4(1) ->ICU4                         <---------ANAC58                   <---------KAN4(2) <-----------GT1 --YAB1                         <---------ANAC46                 <------ZmHOX2a(1)<---------ARR14(2) -TOE2(3)                       <---------AtLEC2           <---------YAB1         --------->ARR14(2)< ----MYB83                  <----------DOF2               <---------AHL20(2)  <------ZmHOX2a(1)     - ----MYB46(1) --------->ARR14(2)<---------ANAC58          --------->AHL20(2) ----------->GT1---------   tggtcccaaattcaagtattctctggttctctttgcatggatgaaagaagatggccatatttttataggaatgttcagaaggagaattcacaatgtggag  24295200  Previous    Next  AGI:  At1g65385.1    Description:  pseudogene, putative serpin, blastp match of 51% identity and 9.6e-61 P-value to GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein {Citrus x paradisi} Range:  from: 24293321    to: 24294687    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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