Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------ANAC46                                <---------ANAC46                             <---------ANAC46                           <------MYB46(1)                                                   --------                           <------MYB83                                                      --------                          <---------DEAR3(1)                                                 ========     --------->ARR11(3)   --------->ALFIN1                                          ------>ZmHOX2a(1) ------>DOF2              <---------AtMYB61                      ---------->DOF2 ---------->ID1<----- -->DOF2               <---------MYB46(3)              <-------TEIL     <----------DOF2     <--------   aaagagagataatcaaacacatcaatgggtggtgttgtggatgagagacattccacatacatagacacaaagccctttccattgtcctcttcgtttcctt  24289400            ------>MYB83         --------->MYB46(3)      --------->DAG2        --------->ANAC58       ---------->DOF2        --------->ANAC58  <-----------------AGL1      --------->MYB46(3) <-----------GT1 --------->AGL1       <---------ICU4 --------->AG     ------>ZmHOX2a(1) ==========================================MADS_MADS      <---------ANAC58                   <------- -----DOF2  ------>MYB46(1)<---------------AGL15          <---------ANAC58     ---------->DOF2 ---------AGL1  ----------->RAV1(2)  ----------->RAV1(1)<---------YAB1---------->DOF2----------->HVH21   ttgggtaaacaaccaatctcctgatttttacaaaaaaggcaacatttcttagttatatatgcttgtagtgaagaaagatgtgaaagtctgacaagagaac  24289500                                            --------->At4g35610                                        --------->ARR14(2)                                        --------->GLK1(2)                                        <---------ARR14(2)                                       <---------ARR14(2)      <------ZmHOX2a(1)                <---------GLK1(2)                           ------->GAMYB ---ID1  <------ZmHOX2a(1)     <---------ICU4          ------->TEIL       <-----------RAV1(1)   aagacgaaggaggagtctttctccaagtcttcaacattgcagaatctgatgcatatgaacccattttctctacaaaatgttgcaaccctagagagcaaaa  24289600                         ----------->TGA1                       <---------At4g35610                       --------->At4g35610                      --------->ARR11(3)                      <---------ARR11(3)              --------->YAB1           --------->YAB1----------->HVH21                                            <---------ICU4        --------->ANAC46------>ZmHOX2a(2)                                          <---------AHL20(2)        <---------------AGL15                                                 <---------ARR11(3)        --------------->AGL15                  --------->ANAC46               --------->ARR11(3)       ----------------->AGL3           <-----------GT1               <---------GLK1(1)       ----------------->AGL2        ----------->GT1         <---------AHL20(2)<---------RVE1(1)-----   caaaacatacccataatcagaaatgatctgacgaaaatcgagttacaatacacaagagaacattttttttagaattctcagatattaaaaatgacacaga  24289700                                                              --------->TOE2(2)                                                             ----------->RAV1(2)                                                            -------->P               <---------------AGL15                        ------>MYB83        <----------DOF2                                     ------>MYB46(1)        <---------DAG2                                    --------->AtMYB61     <---------YAB1                                       <---------MYB59 <---------DAG2------>ZmHOX2a(1)                         --------->MYB46(3)                    ------ <----------DOF2    ---------->DOF2                   ----------->HVH21                  --------->GLK1(1) ----->DOF2 ---------->ID1                     ---------->DOF2--------->TOE1(2)          <---------GLK1(1)   aagctttatgctttttcctcttaaaagactaaacaagttgaaatctagagaaagaactgaccaacctgagacaacgagagagacttgagagatttcttcg  24289800             ------>ZmHOX2a(2)            <------ZmHOX2a(2)                                           <---------TOE2(3)           <---------AGP1                                             <---------AHL20(2)           --------->AGP1  ----------------->AGL3                    <---------AHL20(2)           --------->ARR11(3)   --------->AHL20(2)                   --------->AHL20(2)        *TSS--------->CCA1(2)   <---------AHL20(2)                --------->AHL20(2)              ---    <---------YAB1       <-----------GT1 ---------->DOF2        --------->TOE2(3)             <------ --->ANAC46<---------ARR11(3)   <-----------TBP           --------->ANAC46                ---------->DOF2   gcacttactattagatctagggtttagataccatttatatagagaaagttttagagttgcacaaaacataaattaatgtgttagaatgggcctaaagcta  24289900      <---------ANAC46      <---------ANAC58            --------------------->WRI1      <---------ANAC58           <---------AtLEC2 --------->ZAT2                  <---------ANAC46 --------->At4g35610        <---------MYB46(3)                                                 ------ <---------At4g35610        <------MYB83                                                   <---------ARR11(3) <---------ZAT2             <------MYB46(1)                 ----------->GT1                --------->ARR11(3) ------->DOF2           <-----------RAV1(1)      --------->ARR11(3)           --------->AtLEC2<------ ----ID1            <---------AHL20(2)           <---------ARR11(3)<---------AHL20(2)  ---------->DOF2   caaagctggcctggttttgttttaaattgttggtttcatggacattttcgacatcttcgaacatgttattttttgagactatgcaaacttgaagctcttt  24290000                                                                <----------DOF2 --------->At5g28300                                                           <-----------GT1      <---------MYB52(1)                                                           --------->ZAT6      ----------->GT1    --- --->ZAT14             ----------->GT1  <------MYB83  <----------DOF2  <----------DOF2            === ----DOF2         <---------ANAC46      <------MYB46(1)  <-----------GT1       --------->LBD16 <-----   actcgagttgaaatcgtatgacttatagtgaaattgtacatttggtttcgatttttcttttacactctttcttctttgagccggtaaatttggaattttt  24290100                                        --------->ANAC46                                       <---------TOE2(3)      <----------DOF2                                      <---------DOF5.7(2)     <---------DAG2                              <---------YAB1            --------->YAB1                  <---------AHL20(2) ------------>AGL15        --------------->AGL15        ----------->GT1               <---------AHL20(2) ==========================================MADS_MADS--------->ATHB12              --------->YAB1 ------GT1 --------->YAB1  <---------------AGL15 --------->YAB1            ---------->DOF2       ----   cttcatagtggaatcatatgctgttttttttttttatagtaaacgttacaagaatgaatggtaactttatccaaaaaaaaagaatcatattattttgaaa  24290200                           --------->TOE1(2)                                    <---------YAB1                        --------->AHL20(2)                                <---------AHL20(2)     ----                   <-------TEIL                <---------AHL20(2)    <---------YAB1         ---------       --------->AHL20(2)  --------->TOE2(2)  --------->AHL20(2)  --------->AHL20(1)        <-------- ----->ICU4    <---------TOE1(2) --------->CCA1(2)               --------->AHL20(2)        --------->AHL20(2)   tgattttaagtaaattctaggttcaataacataagatttgagactaaatttaaaatttcttagtaaaatatatgatttttttataaatacctataaaatt  24290300  Previous    Next  AGI:  At1g65370.1    Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G65150.1); similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G65150.2); similar to unknown [Populus trichocarpa] (GB:ABK94833.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974) Range:  from: 24288132    to: 24289808    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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