Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------YAB1                                                                               <---------AHL20(1)                                                                          <---------YAB1 ------->bZIP60(1)                                    <-----------GT1<----------DOF2<-----------GT1 --------bZIP60(1)                             <---------ALFIN1 <-----------GT1<---------AHL20(2) ----->YAB1                            --------->TOE2(3)     --------->YAB1  <---------YAB1 -----ATHB12                          <---------YAB1 <---------AHL20(2)   <---------AHL20(2)   ------   gatgtcaaatactgaaactattttagaactcttgtgagttatcttagcaccacattttatcacttataactctttttttattatttttaccaatagaaag  24260500                                                --------->YAB1                                                ----------->GT1                                             <---------ICU4                                             -------->HAHB4                                             <--------ATHB1                                             --------->ATHB51               <---------------AtSPL8                                            --------->AHL20(2)     --------->TOE2(3)                                            <---------ATHB12   <---------RVE1(1)               ------                                            --------->ICU4---------->DOF2   --------------->AtSPL8                                            <---------ATHB51   <---------CCA1(1)           --------->YAB1                                            <---------AHL20(2)--------->ARR11(3)           --------->AHL20(2)  <-----------GT1                        <---------------AGL15--------->ARR14(2)  <----------DOF2   - ----->GT1     <-----------GT1           --------------->AGL15<---------ARR11(3)------->TEIL <-------   tttataaccatgtttttataccaattgaatttcttatatttttcaaataattgtaataccaaaagatattcttagagtaatgtactttacaaattataaa  24260600                                            --------->TCP20                                            <---------PCF5                                            <---------PCF2                                          --------->LBD16                                         <---------ANAC58                                         <---------ANAC58                                        <---------LBD16                                  ------>ZmHOX2a(2)                                <---------ARR11(3)                                   --------------->AGL15                                --------->ARR11(3)              ------->TEIL        <-----------GT1 ---->DOF2                     --------->YAB1            --------->CCA1(2)        <-----------GT1 ---------->GT1               <---------ATHB12       ------->MYC3         <-------TEIL      --------- --YAB1       --------->CCA1(2)<---------ICU4        <-------MYC3        <-----------GT1 <---------MYB52(1)   agttgaaaatagcgatatatgggctccatctaatgatctcaatgcgggaccagcatgtgatatacgaatgtctatatacattattttctctgttttgtaa  24260700                                                 -------->P                                                 ------>MYB83                                                 ------>MYB46(1)                                                ----------->RAV1(1)                        --------->ATHB12       --------->AtMYB61                       --------->AHL20(1)      ------->GAMYB                       <---------AHL20(1)     <---------MYB55(2)                       <---------AHL20(2)     <---------MYB52(2)                       --------->AHL20(2)     --------->MYB46(3)                             <-------                  <---------AHL20(2)         --------->ANAC58                                --------                  --------->AHL20(1)         --------->ANAC58                               <--------                  <---------AHL20(1)         --------->ANAC46                           ------------>CBF                 --------->AHL20(2)         ------->GAMYB                               <------ZmHOX2a(2)                 <---------AHL20(2)        --------->MYB46(3)                   <---------At4g35610 -->GT1          --------->YAB1       ----------->GT1                           --------->ANAC46   caataaacgagtaatgaaattatattttattggcttcaatttgtaacaaccaacaagaggtcgaatgagccaactagaatacagcccacgatcaataatc  24260800 --------->TOE1(2) --------->TOE2(2)       <----------DOF2                          --------->TOE2(3) --ICU4 <---------HSFC1(2)    <---------TOE2(3)       <---------ICU4  <------------CBF           ---- ->YAB1------->TEIL  <----------DOF2     --------->ZAT6  <-----------HVH21     *TSS             ----- -ATHB12--------->HSFC1(2)   <-----------GT1  ----------->TBP   -------->P  --------->WOX13(1)  <----   aaacctatgaaacttccttctctctttcttttaacatttccaaacactatatatactaatgtcacttacctcgattgtccatcaaacaatacatttgaga  24260900                                                                                --------->GLK1(2)   <                                          --------->ANAC58                 <------NtERF2          ---                               <---------ANAC58                           <---------RAP2.3(1)    <---         ------>ZmHOX2a(1)     <---------ANAC46  <---------ANAC58         --------->LBD16        <--- ----->GLK1(1)                 <---------ANAC58  <---------ANAC58        <---------RAP2.3(2)     <--- ---->ARR11(3)              <----------DOF2  <----------DOF2            <---------LBD16<---------AtLEC2 -----ARR11(3)           ------->TEIL     --------->ANAC58        <-----------------AGL1        <----   tatcaatactcctgtgagaacaaaatgaagctttcttgtggtacaagctttgcgttcttacttctgtttcttcttgcggcacaatctgtgcatgtctatg  24261000        --------->HSFB2a(2)                 --------->LBD16        <---------HSFB2a(2)                <------NtERF2    <---------ANAC58                      <---------LBD16    <---------ANAC58                      --------->At4g35610   <---------HSFB2a(1)                    <---------At4g35610   --------->At4g35610                  <---------DEAR3(1)   <---------At4g35610                  <---------RAP2.3(2)   --------->HSFB2a(1)            ----------->HVH21                                                 -   --------->HSFC1(2)             <---------AtMYB61     ----------->RAV1(1)                        <-   <---------HSFC1(2)             --------->ALFIN1     --------->ANAC46                           === <--------P                     <---------ANAC58    <-------TEIL                                  --- ---------MYB52(1)       <-------TEIL   <---------RAP2.6(2)                                       === ------>LBD16           --------->CCA1(2) --------->LBD16                                         --- ------ANAC58          --------->ARR14(2) ------>NtERF2--------->ANAC58                       ------- ------ANAC58          <---------ARR14(2) <------NtERF2--------->ANAC58                       <------ ------ANAC46      <-------TEIL <---------ANAC46   --------->CCA1(2)                    <---------ETT(2) -----LBD16---------->DOF2      <---------ANAC58  <---------GLK1(2)        <----------DOF2  XXXXXXXXX   cgggtagcttccacaaagacgttcagatacattggggtgatggccgcggaaagattcacgacagagatggaaaacttctttctctctcgctcgacaaatc  24261100        <---------MYB52(1)       --------->LBD16     ------>ZmHOX2a(2)     ===========================HOX2a_HOX2a     <---------LBD16    --------->ARR14(1)    <------ZmHOX2a(2)    ============================HOX2a_HOX2a   <---------ARR14(2)   --------->ARR14(2) -------->HSFB2a(2) --------LBD16                                                                 <---------ZAT2 ===========HOX2a_HOX2a                                                        ----------->RAV1(2) -------->RAV1(2)                                                              --------->ZAT2 ==========HOX2a_HOX2a                                                         --------->At4g35610 --->ZmHOX2a(1)          <------ZmHOX2a(1)                           ------>ZmHOX2a(1)      --------- -->ARR14(2)          <-----------RAV1(2)                            --------->LBD16        <-------- ---ARR14(2)        -------->P                     <-------TEIL     <---------ANAC46   ----------->GT1 XXXXXXXXXXX>MIR162A/B<---------LBD16   ---------->DOF2    ------->TEIL        <---------At4g35610   ctctggatccggttttcagtctaaccaggagtttctctatggcaaagccgaggttcaaatgaaacttgttcctggtaattcagctggaacagtgacaaca  24261200                                                                                         <---------YAB1                                                                                --------->ATHB12                                                                               --------->AHL20(2)                                                                               <---------AHL20(2)          <-------TEIL                   <----------DOF2                     --------->TOE2(3) >bZIP60(1)                         ---------->ID1              <---------AHL20(2)   <---------ANAC46 -bZIP60(1)                  <---------MYB52(1)      ------>ZmHOX2a(1)      --------->REM1(1)   ttctatgtaagttacatacaattttcaaaccgttttttgtcatcttttgctattcctatagtacatatatttaggcctacattaattgagtatgtttgtg  24261300                                     --------->TOE1(2)                                    <---------ANAC46                                    <---------ANAC58                                    --------->O2                            <---------HSFB2a(2)                            --------->HSFB2a(2)                            --------->LBD16                           <---------LBD16                      <---------ARR11(3)        <----------DOF2   <---------LBD16  --------->YAB1      --------->ARR11(3)                   <---------ARR11(3)          --------->ARR14(2)  <---------ICU4--------->At4g35610 <---------ANAC58       --------->ARR11(3) <-----------HVH21 <---------YAB1 <---------At4g35610 <---------O2<------ZmHOX2a(2)     --------->YAB1   <---------ARR14(2)   tttatgatgactttgtgtagctaaaatctccgggaactacgtgggatgagatcgatttcgagttcttgggaaacataagtggtcatccatatactctcca  24261400  Previous    Next  AGI:  At1g65310.1    Description:  ATXTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17); hydrolase, acting on glycosyl bonds. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 17 precursor (XTH17) [Arabidopsis Thaliana] (GB:O80803); similar to ATXTH18/XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT4G30280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43271.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro do Range:  from: 24260879    to: 24262136    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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