Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                -----                                                                                               <-----                                                                      --------->DAG2           ------                                          <----------CDC5  --------->ANAC46                  --------                            <---------ANAC46             <-----------GT1  --------->ZAT18  <---------       <----------DOF2      <---------ANAC58            --------->ZAT14   <---------ZAT18  ---------- -----------GT1             <---------ANAC58       <---------ATHB12  ---------->DOF2      <---------ANAC58 -->DOF2                 <----------DOF2 <---------At4g35610<---------MYB59               <---------ANAC46 >AHL20(2)     --------->ICU4 ----------->GT1    --------->WOX13(1)<---------HSFB2a(2)    <---------ANAC58   ataaaccttcttttgcaatgttcagagctttcttgtaaaatgatgctgagccaatcagtttacccaattctaaaagtgcaattgcagagtaagcgtgtac  24199300         <---------ANAC46         <---------ANAC58         <---------ANAC58         <---------ANAC55(2)         <---------ANAC55(1) ------>ANAC46 ---->ANAC46--------->REM1(2) ----ZAT14 ----------->HVH21 --->ZAT18 <---------MYB52(1)           ----------->GT1 ->REM1(2)--------->LBD16      ----------->RAV1(1) ------AtSPL8              --------->ANAC58          <-----------GT1                               <- ----->AtSPL8              --------->ANAC58        <-----------HVH21                ---------->DOF2==   accacaatcttccgtgaagcattctacagaagccaacaagaatgggaatttcatgtcactgttttctgttttagtcccttgttcataaaagaaacaacct  24199400                        ======================bZIP_DOF                        <----------DOF2            <---------HSFB2a(1)                       <---------DAG2              --------->HSFC1(2)                      --------->HSFB2a(1)         <-----------ARR10                 --------->HSFB2a(2)              <---------ARR14(2)                 <---------HSFB2a(2)              ------->TEIL                                      -                <---------ANAC58                  <---------ARR11(1)                               <-           --------->ATHB12         <---------TGA1a<---------HSFC1(2)                             <--          --------->MYB46(3)        --------->O2  --------->ARR14(2)                             ---- <------MYB46(1)<---------ANAC46    --------->TGA1a--------->HSFB2a(1)                <-----------HVH21 <------MYB83   <---------ANAC58    <---------O2 <---------ARR14(1)                   ------>ZmHOX2a(1) -------P------->TEIL <---------HSFB2a(1)        <---------CCA1(2)     <---------ANAC58   --------->At4g35610 =============================================MYC_MYB                  <---------ANAC58   <---------At4g35610   tgtaggtaatgaaccattgctggaaccttttccttcccacgagtcgaaatcgaatcttcgattacttccaatgccttgatgtaatctccttcagcgaagt  24199500                                    ======================HOX2a_HOX2a                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                   =======================HOX2a_HOX2a                                   <---------GLK1(1)                                   <---------HSFB2a(1)                                  --------->ARR14(3)                                  <-----------ARR10                                  <---------ARR14(3)                      ---------->DOF2                                  <---------ARR14(2)                     <------ZmHOX2a(1)                                  --------->ARR11(3)           <------NtERF2                                  --------->ARR14(2)          ------>NtERF2              --------->HSFB2a(2) <---------ARR11(3)         --------->RAP2.3(2)     --------->MYB52(1)              <---------HSFB2a(2)<------ZmHOX2a(1)           --------->ANAC58       ------->GAMYB           --------->GLK1(2)  <-----------RAV1(2)            --------->ANAC58       --------->TOE1(2)   <---------ETT(2)          =============HOX2a_HOX2a       --------->ATERF1(1)    --------->MYB46(3) ------>GAMYB<---------LBD16 ------>ZmHOX2a(1)     <------ZmHOX2a(1)   <---------TOE1(3) -----------AtMYB77          ==============HOX2a_HOX2a     <---------ATERF1(1)     <---------MYB52(2) -------At5g28300       <---------ANAC58     ---------->DOF2--------->RAP2.3(1)  --------->MYB52(1) ----->MYB52(1)         <---------ANAC58   <---------------AGL15       <---------TOE2(3) <---------GLK1(2)   aaccgtggacaagtttctggatttttgcttcctcaggatcttcgactaaaagaggaagaagaggcgccatgttaaggaaagagtaacgaacgattcttca  24199600                                                                                 --------->ANAC55(2)                                                                                 --------->ANAC46                                                                                 --------->O2                                                                                 --------->ANAC55(1)                                                                                 --------->ANAC58                                                                                 --------->bZIP60(2)                                                                                 --------->ANAC58                                                                       ------->MYC2                                                                       ------->MYC3                                                                       <-------MYC3                                                                       <-------MYC2                                                                      --------->ANAC55(2)                                                   ------->GAMYB      <---------ANAC58                                          <---------ICU4              <---------ANAC55(2)                                       --------->YAB1                 ===============================                                      ----------->GT1                 <---------TGA1a                                      <---------YAB1                  <---------ANAC58                                    <---------At4g35610               <---------ANAC46                                    --------->At4g35610               --------->O2  --------->MYB52(1)                             <---------ANAC46      =============================MYC_MYB                             <---------ANAC58   ----------->RAV1(1)   --------->TGA1a       <--------                         <---------ANAC58 --------->YAB1              <---------O2 ----------->HVH21          <-------TEIL   <---------ANAC58<---------YAB1 <---------REM1(1)     ------>ZmHOX2a(2)<-----         --------->GLK1(2)   <---------ANAC58--------->YAB1      --------->YAB1  <---------ANAC55(2)   agcttcttgagattcagatagaaacttgtttgcgagggagatgataataacaacagagatgaagcatttatcacgtgtgatccacgtaacagagttgttg  24199700                     ------->PIF5                     <-------MYC3                     ------->MYC3                     <-------MYC2                    <---------TGA1a                    --------->O2                    --------->bZIP60(2)                    <---------O2                    --------->TGA1a                    --------->ANAC46               <<<<<<<<<<GATA-1          <-------MYC3         --------->ANAC55(2)         =====================bZIP_bZIP         <---------TGA1a         <---------ANAC55(2)         <---------ANAC46                                                                   ---------         <---------O2------->MYC2                                                          <---------GLK1(1)         --------->O2<-------PIF5                                               >>>>>>>>>>>>>>>>>LFY         --------->TGA1a            *TSS                                        --------------->AGL15         ----------->GT1          --------->ANAC58                             <-----------------AG <----------DOF2    --------->ANAC55(2)     <---------ANAC58                 <---------ARR11(3) ==================bZIP_DOF       --------->ANAC58                           --------->ARR11(3) =============================bZIP_DOF      <---------ANAC58     <---------ARR14(2)        --------->GLK1(1) ===========bZIP_DOF============================================bZIP_DOF    <---------GLK1(1) -MYB46(3)------->MYC3----------->HVH21    <------NtERF2         --------->ARR14(2)<------------CBF ----REM1(1)  --------->GLK1(1) --------->GLK1(1)    <----------DOF2 <<<<<<<<<TBF1--------->ATHB12<--   aagcttttatcacgtgaaatccacgtgacaagagaaacccaagtcgtcgtgtcttctttttcgaacagttcttcttcgatatctccattggggaattctg  24199800                  <------------CBF                 --------->ATHB12                 --------->YAB1                                   --------->LBD16            --------->ZAT18                                      <---------HSFB2a(2)            <---------ZAT18                                      --------->HSFB2a(2)         <---------ANAC58                           <---------AHL20(2)         <---------ANAC46              --------->MYB52(1)      --------->AtLEC2                  ----   <---------ARR11(3)                 --------->ANAC46    <-----------GT1             --------->ANAC58   --------->ARR11(3)               --------->ANAC46--------->AHL20(2)                --------->ANAC46 >GLK1(2)<---------ANAC58  ----------->GT1  <---------GLK1(2)--------->DEAR3(1)       --------->ANAC58 -------ETT(2)  <-------TEIL      <-----------GT1  --------->AHL20(2)      ----------->GT1--------->LBD16   tcgaacatcttgtgtgcattcattgttttgagtaaattacacaacagcttctatttaatttcgccatccagaataaacagaaaaaaacaccccagaaatg  24199900                                     <-----------------AGL1                           <---------ANAC58               <-----------HVH21                     --------->AHL20(1)            ---------->DOF2                               <---                     --------->AHL20(2)          <------ZmHOX2a(2)                     <---------ANAC46                     <---------AHL20(2)  --------->ARR14(2)                         <-----------RAV1(1)                    --------->AHL20(2)   <---------ARR14(2)            ------>ZmHOX2a(2) <---------ANAC46     --------->MYB52(1)    <---------ANAC46  <---------HSFB2a(2)       ============================== ------->GT1 <----------ID1<---------ANAC58 <---------LBD16--------->WRKY18(1)     <---------TOE2(3)   tgtgaattaacagataagacaaaaaaattgtgtgaagttttcgaattcgggatcaaagatggtcatgggatgatcgaaattggtttatgttgtgtaagag  24200000                                                   --------->ARR11(3)                                                   <---------ARR11(3)                                                 --------->ICU4     <---------YAB1                                    <---------AHL20(2)    <---------------AtSPL8            ---------                                   --------->AHL20(1)     --------------->AtSPL8        ------->TEIL           --------->TOE1(3)       <---------AHL20(1)--------->TOE2(3)          --------->ANAC58           --------->TOE2(3)    --------->AHL20(2)--------->YAB1<----------DOF2 --------->ANAC58 ---ZmHOX2a(1)        <---------DOF5.7(2)  ---------->ID1<---------YAB1         <---------ANAC55(2) ===HOX2a_HOX2a     --------->DOF5.7(2)  <-----------RAV1(1)    <---------DAG2  --------->ANAC55(2)   gaattaacaaaaaccttaagtcgttaacaattgtttatatattttgttgcaattatcttattagtactttattactaaaatcaagtaatgaaccaaaaga  24200100                                                                     <---------HSFC1(2)                                                                     <---------HSFB2a(1)                                                                     --------->HSFB2a(1)                                                                     --------->HSFC1(2)                                                                    <-----------ARR10                                                                    ------->TEIL                                            <-------TEIL            <---------ARR14(2)                                         --------->At4g35610        --------->GLK1(2)                                --------->ATHB12                    <---------ARR11(1)                                --------->YAB1          ------->TEIL--------->ARR14(2)          <----                                -------->ATHB1         --------->ARR14(2)                      ------                               <---------ATHB12        <---------GLK1(2)   <----------DOF2     <----- ->DOF2                        <---------YAB1      ---------->DOF2 <---------ARR14(1)      <---------   ttacaaacttgagttccatactaatacatttctatcattgaacagcttcataaaaaagaacctctgaacgaatcttcctttctccacaaattttgaccac  24200200  Previous    Next  AGI:  At1g65120.1    Description:  ubiquitin carboxyl-terminal hydrolase-related. similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT1G65130.1); similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT1G65200.1); similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT1G65110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62486.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain Protein of unknown function DUF627 (InterPro:IPR006866); contains I Range:  from: 24195011    to: 24199736    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g65130.1    Description:  ubiquitin carboxyl-terminal hydrolase-related. similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT1G65200.1); similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT1G65110.1); similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT1G65120.2); similar to hypothetical protein OsI_009911 [Oryza sativa (indica cultivar-group)] (GB:EAY88678.1); similar to Os03g0165600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049069.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain Protein of unknown fun Range:  from: 24200135    to: 24204685    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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