Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------ANAC58                                  <---------ANAC46                          <----------DOF2                     <---------ZAT2                                      <---------ARR11(3)                     <---------At4g35610                             ---------->DOF2  --------->ANAC58   --------->At4g35610                   --------->ETT(2) <---------DAG2  --------->ANAC58   --------->ZAT2                       <---------------------WRI1     <----------DOF2 ------>ANAC46 <-----------ARR10  <---------ANAC58  <---------AHL20(2)   --------->ARR11(3)    ------ --DOF2     --------->YAB1  --------->ICU4      ------>ZmHOX2a(1)---------->DOF2  ------>ZmHOX2a(1)   tcgcaagtcttgaagcataactaagctgcaattttggcgagttaatgctcctaagtaattgtcgatacaaagaaagaacttttcctctgttctttgcagc  24162800                                                                             --------->ATHB12                                                                            <---------YAB1                                                                            <-------TEIL                                                                        <-------MYC2                                                                        ------->MYC3                                                                        ------->MYC2                                            --------------->AGL15       <-------MYC4                                            <---------------AGL15       <-------MYC3                                           <-----------------AG      <---------ALFIN1       <-------GAMYB                       <-----------------AGL3  ------>ZmHOX2a(1)    --------->At4g35610                <----------DOF2        --------->HSFB2a(1)    <---------At4g35610         <---------ANAC58              <---------HSFB2a(1) <---------At4g35610            <---------ANAC58             <---------KAN4(2) >NtERF2  <-----------GT1  <---------AtLEC2<-----------------AGL1  --------->AtLEC2   ctcttctgctgttaaccatatcagactcttcatggcttcgtctttaacaaaattggaaacgagaatgtcctgcacatgttcattgagcaattttgtcaaa  24162900                                                   <---------ANAC55(2)                                                   --------->ANAC55(2)                                             <---------TOE2(3)                                             <---------TOE1(3)                                         --------->TOE2(3)  --------->ANAC58                                        <---------ICU4      --------->ANAC58           <---------MYB52(2)           --------->YAB1      --------->ANAC46         ---------->DOF2                --------->ATHB12 --------->TOE2(3)                --------->MYB52(1)      --------->ANAC58                 --------->ICU4    --------->TOE2(2)         --------->YAB1   -      --------->ANAC58                 <---------ATHB12  --------->TOE1(3)         <---------ICU4----     --------->ZAT18        --------->YAB1--------->DOF5.7(2)           --------->At4g35610<---------TOE2(3)     <---------ZAT18       <---------ATHB12 <---------DOF5.7(2)    <---------YAB1------->TEIL<------ZmHOX2a(1)   cacttggtgcgcaaagaaccaaaacaccaatgaaaaatcaaatcattaacgttacataacctaagcaatttgatagctaaatgaatcataactaaggaaa  24163000                                                                  --------->ANAC58                                                                  --------->ANAC58                                                                ---------->DOF2                                                              --------->MYB46(3)                   <-----------GT1                           ------>MYB83      >>>>>>>>>RAP2.2                                        ------>MYB46(1)    <---------ARR11(3)                                      ----------->RAV1(1)   <---------CCA1(2)                                       --------->AtMYB61 ------>TEIL       --------->YAB1                      <-------TEIL            --------->LBD16 ------->GT1    <---------CCA1(2)         <-------TEIL--------->CCA1(2)      <---------LBD16    <----   tgtatatatctaaatctcatatcacaatttgttcagggtttaagtccatttttgagatacaccaacaaaagcaattcaaaccggagaattcagtagtagg  24163100                                                                                        <---------DEAR3(1)                                                                                       <------NtERF2                                                                                     <---------DEAR3(1)                                                                                    --------->SPL7                                                                                    --------->RAP2.6(3)                                                                                 --------->MYB46(3)                                                                         <---------ARR11(3)                                                                         --------->ARR11(3)                                                                  <-----------HVH21--------->MYB52(1)                                                               --------->ZAT2   <---------At4g35610                     ---------->DOF2                           <---------At4g35610----------->HVH21             <------MYB46(1)                                   <---------ZAT2   <---------LBD16             <------MYB83   ---------->DOF2                    --------->At4g35610<---------SPL7             <---------ANAC55(2)                           <-----------HVH21  <-----------GT1     --------->TOE1(2)   --------->YAB1              <---------ANAC58    <---------GLK1(2)     ------ --ZmHOX2a(1)--------->ANAC55(2)   ---------->DOF2   <---------ANAC58   <---------RVE1(1)    --------   aaattcacatacgataggtatccaaaagcataaagaagaaagaagagactcgatgacttgccttcagctgtgagagattttcaccggacggcgatgatcc  24163200                                                                    ----------->GT1                      <---------DEAR3(1)                            <----------ID1                     --------->ATERF1(1)                           ----------->GT1              --------->ATERF1(1)                                 --------->DAG2              <------NtERF2                                      ---------->DOF2            <---------ANAC58                               <------------CBF               <----------DOF2            <---------ANAC58                              <---------AHL20(2)              <---------DAG2         --------->ALFIN1                                 --------->ATHB12             <-------------       --------->ALFIN1 <------NtERF2 ----------->GT1    <---------AHL20(2)          <-----------GT1 >ZmHOX2a(2)<---------ANAC46      ---------->DOF2        --------->AHL20(2)        ---------->DOF2 ->ARR11(3)<---------LBD16    <------ZmHOX2a(1) *TSS    <---------YAB1         <---------AtLEC2   agtgagcgagagtggcggaagcgggaggcgaaggactaaagagtaaatttgctaagttattaattggaaaaggaaaaatttgcattaaaaccctttttgg  24163300                                     --------->TOE2(3)                               --------->TOE1(3)                               --------->TOE2(3)            --------->YAB1                             -------->P               --------->ANAC46                            --------->MYB52(1)        --------->ANAC58                           ------->GAMYB              --------->ANAC58                          --------->MYB46(3)   <---------WRKY18(1)                          <---------MYB52(2)  --------->WRKY38(1)      <------------CBF    <---------MYB46(2)  --------->WRKY45 ----AGL2                <---------At4g35610  --------->WRKY12    ----------->GT1        <-----------GT1   tctgaacaaattgcaaaacaaactttcaactaacctcaaacttaaactttgaccacaagaaataaaaattgtaaaataccctagactaaaatttccattt  24163400                                                                       <----------DOF2                                                                     <---------At4g35610                                                             <---------DAG2                                                             <----------DOF2                       <-----------GT1             ------->TEIL  <-----------GT1                       <---------AHL20(2) <---------TOE2(3) <---------ANAC58                        -                    <---------ICU4        <---------TOE1(3) <---------ANAC58                     ----                   --------->AHL20(2) <---------DAG2      <-----------GT1 --------->MYB52(2) --------            --------->ZAT6   <----------DOF2 <------------------------ANAC81           -------------- <-----------GT1   <---------AHL20(2) <----------DOF2 <----------DOF2--------->At4g35610  <----------ID1   gattttcagtctcaacactaaatatttacttcttttcaaactttatggttttgcatctttttgcttttttcagctttagttgataagagaagggaacaaa  24163500                                                                                              ------>MYB46(1)                                                                                              ------>MYB83                                       ----------->GT1                                        -------                                      <---------TOE1(3)                                     ---------                                      --------->DAG2                                        <--------             --------->YAB1           --------->MYB59                                      --------->ANAC58 --------->DOF2                     <--------P                                             --------->ANAC58 ----->TOE2(3)           --------->CCA1(2)                                   --------->HSFC1(2) ->MYB46(3) <---------YAB1     --------->ALFIN1                              <---------HSFC1(2)     < ---------->ANAC81      <----------ID1<---------TOE2(3)         <----------DOF2            --------->ANAC46   cttaaagaaaaactattatagatagagagacaagtgtggtaaggtaaacagaagaccagtttgctacttttaagttccaagcttctatgagacacccaac  24163600                                                                                            <--------                                                                                <---------MYB59                                                 --------->ZAT14            --------->GLK1(1) ---->RAV1(1)                           --------->GLK1(2)                   <---------GLK1(1)  ------ >MYB46(3) --------->ARR14(2)       --------->ANAC58                      --------->LBD16 <----------DOF2 -MYB55(2) <---------ARR14(2)       --------->ANAC46               --------->ZAT14  --------->ZAT6 -----------GT1------>ZmHOX2a(1)    --------->ANAC58              <----------DOF2------>ZmHOX2a(1)   atttacattttcaaatcctctctatagcaaaaccattcacacaatctgaagtttactcttacttctctctttactccgaaatcctaactcttctttacca  24163700  Previous    Next  AGI:  At1g65032.1    Description:  similar to Os02g0695700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047811.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD08157.1) Range:  from: 24162313    to: 24163248    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g65040.1    Description:  protein binding / zinc ion binding. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G16090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62198.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 24163497    to: 24165701    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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