Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------YAB1                     --------->YAB1                  --------->YAB1                 <---------YAB1            <---------AHL20(2)    ----------->GT1 <---------YAB1          <---------ATHB12   --------->AHL20(2) -----ZAT6 --------->AHL20(1)     <---------ARR11(3)   <---------YAB1              <---------ATHB12-- ----YAB1  <---------AHL20(2)     --------->ARR11(3)<---------YAB1       ------>ZmHOX2a(1)  --------- -YAB1     --------->AHL20(2) ---------->DOF2       --------->ICU4 <---------AHL20(2)  --------->AHL20(2)   gttagatagaaaatttaatattatcataaatgtaaagaacttgctaatcaagttatgatttttgtataaataatcctattagctaatgaataaatagaga  24150300                                                                                        <---------YAB1                                                                                       <---------AHL20(2)                                                   <---------ANAC46                    <---------AHL20(1)              ---------->DOF2                      ----------->GT1         <---------ANAC58       --------->ATHB12                     <---------ATHB12               --------->ANAC55(2)       -------->ATHB1                      ------>MYB46(1)                 <---------ANAC55(2)      <---------YAB1                       ------>MYB83                    <---------ANAC58 ------->GLK1(2)                         --------->MYB46(3)           --------->YAB1 <---------YAB1-- -->GT1--------->ATHB51------>ZmHOX2a(1) --------->AtMYB61  <-----------GT1<---------ANAC46 <--------   aaacctgtattattgctaaagtttcctccaaacttatcagacaccaatcgatgatgtataatataccatttttcataacgtgattctattatttttacca  24150400                                                                   <---------ATHB51                                                                   --------->AHL20(2)                                                                 --------->YAB1                     <---------YAB1                      ------->MYC2                   --------->AHL20(2)                    <-------MYC2                   <---------AHL20(2)                    <-------MYC3           --------->YAB1                                ------->MYC3          <---------YAB1                               ------->TEIL<---------AHL20(2)        --------->YAB1                                <---------ANAC58                <----------ID1 ------->YAB1      --------->YAB1      ------->TEIL   <---------ANAC58        --------->AHL20(2) ---GT1 <-----------GT1  <---------AHL20(2)  <---------YAB1----------->GT1    <---------AHL20(2)   ttcacaatatttatcatacatttatatttgattttcatgtgtatgttatatttgatgcatgtggaaaaaataattcaaaattaaaaaaactacaaaacgt  24150500                 --------->AHL20(2)                 <--------HAHB4                 --------->ATHB51                 <---------AHL20(2)                 -------->ATHB1                --------->ICU4             <---------YAB1           --------->YAB1       <---------AHL20(2)                                          <----------DOF2        --------->YAB1      --------->YAB1           --------->DAG2          <---------TOE2(3)            <-----------GT1     <---------YAB1           ---------->DOF2         --------->YAB1         ------>ZmHOX2a(1)  <---------YAB1<---------ATHB51        <---------At4g35610     <---------YAB1 --------->REM1(1)   ttttcttattatatcacaattatttaacaaaaaaaagttttgagctattttgtttataatgtttttatgcttttcaatcctacatttcactatcagaaaa  24150600                       --------->AHL20(2)                   --------->AHL20(2)                  --------->YAB1             <---------AHL20(2)             --------->AHL20(2)            --------->YAB1           ----------->TBP                       ---------->DOF2           <---------YAB1              <---------ATHB12                       <---------At4g35610      ----------->GT1--------->YAB1    ---------->DOF2              ----------->GT1  <----------DOF2  ------>NtERF2  --------->AHL20(2)------------>CBF               ---------->DOF2   <---------ICU4 <----------ID1--------->YAB1     --------->ANAC46           ------------>CBF --------->At4g35610 <--   atgaggccaagttataaaaataaaaataaaaactaaacccaataagcccattaaggcccataagtcaatacagcaaaaacagctcatctttgctaaaacg  24150700                                                                ================================HOX2a_HOX2a                                                        <---------GLK1(2)                                                        <---------ARR14(2)                             --------->ANAC58    <---------ZAT14------>ZmHOX2a(2)                     --------->ARR14(2)          --------->ZAT14<-------TEIL                     <---------ARR14(2)         ----------->HVH21             --------->LBD16                   --------->LBD16     ------>MYB83------->TEIL=================================HOX2a_HOX2a                  --------->HSFB2a(2)  ------>MYB46(1)--------->LBD16   <---------ANAC58                 <---------LBD16     <---------MYB59<---------LBD16     <---------ANAC58          <---------AHL20(2) --------->ANAC58 --------->LBD16  <------ZmHOX2a(2)         <------ZmHOX2a(1)         --------->AHL20(2) --------->DAG2  <---------LBD16   <---------ARR14(2)       --------->MYB59       *TSS     --------->MYB52(1)   <---------MYB46(2) --------->ARR14(2)   <---------ANAC46  ------ -------TOE2(2) -------->P---------->DOF2  --------->MYB52(1) --------->ARR14(2)     --------->ICU4<-   tagattactgatttaatctaccggaatcgaaaggcaataccaaacttccggtgaaccggaatcggatccatttgacttgccgtagaaattaggaaattga  24150800                                                                                    --------->HSFC1(2)                                                                                    <---------HSFB2a(1)                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                        =========================HOX2a_HOX2a                                                                        ------>ZmHOX2a(2)                                                                       <------ZmHOX2a(2)                                                                       ==========================HOX2a_HOX2a                                                                      <---------ARR14(2)                                                                      <---------ARR11(3)                                                                      --------->ARR14(2)           <---------HSFB2a(2)                                        --------->AGP1--------->HSFB2a(1)           --------->HSFC1(1)                             ---------->DOF2       --------->ANAC46  <--    <---------ZAT14                                 <-------TEIL      <---------AGP1<---------HSFC1(2)    --------->ZAT14                             --------->DAG2        --------->ARR11(3)         <--- --->ATHB12--------->HSFB2a(2)                 <---------------------WRI1<----------DOF2       ------ --------ZAT14             <------ZmHOX2a(1)  ---------->DOF2        <---------CCA1(2)    ------>ZmHOX2a(1)   ttacagtgttcttcgagaatggagaagaaggagatggagaagttgtgccaaaggtgcaaacaaagctacacagatctttcaaacgaaacttcctcttgcc  24150900                                          ---------->DOF2                                      --------------->AGL15                                     <-----------------AGL1                                     ----------------->AGL2                                  --------->WRKY12                                  --------->WRKY38(1)                               --------->ICU4                           <-----------TGA1       ------>ZmHOX2a(1)   <-----------HVH21--------->DAG2                              --------->GLK1(2) -------MYB52(1)         <------NtERF2<---------------AGL15     --------->TOE1(3)      <---------GLK1(2) ------RAP2.6(3)      ---------->ID1 ----------------->AGL1     --------->TOE2(3) <---------ATHB12 ---->ID1         <---------MYB52(1) <-----------------AG------>ZmHOX2a(1)       <---------TOE2(3)   gttttcatccttccttcttcgtttgtcgtcgtcacgatgaccagaaaaggttatgtctcctacaaaccctaaatctattcactaatgaagaatctcacat  24151000                                                                                             ------>ZmHOX2a(2)                                                                                           <---------ARR14(2)                                                                                           <---------ARR11(3)                                                                                           <---------AGP1                        <---------ICU4                                                     --------->ARR14(2)          <---------GLK1(2)                                                             --------->HSFB2a(2)         --------->ATHB12     ---------->DOF2                         <---------DAG2    <---------HSFB2a(2)     --------->At4g35610--------->YAB1                                <----------DOF2--------->ARR14(2)     --------->ZAT2    <---------YAB1                              <---------ALFIN1  --------->GLK1(2) --------->ANAC58    --------->YAB1                         --------->ANAC58         <---------ARR14(2) --------->ANAC46   --------->AHL20(2)                      --------->ANAC58      <---------TOE2(3) --------->ANAC58   <---------AHL20(2)                    ---------->DOF2         <---------TOE1(3)   cccaagcagcttgattcgctaatttataatggcaaagcacaaattgttgagatgggttttgaaagccatccactttattgtattaaggttctggatctat  24151100                                     --------->ATHB51                                     <---------ICU4                                     --------->YAB1             ------>ZmHOX2a(2)                                     <---------AHL20(1)       --------->ARR11(3)                  ---                                     --------->AHL20(2)     <---------YAB1                    -------                                     <--------ATHB1       --------->YAB1                  ---------->DOF2                      --------->GLK1(2)                   <---------ICU4                 <---------WRKY38(1)                     <---------GLK1(2) --------->ICU4    <---------YAB1                  <---------WRKY12                   ----------->ARR10<---------ATHB51    <---------ARR11(3)             <-----------HVH21                --------->TOE1(3)   <---------ATHB12    --------->ARR11(3)             <---------PCF2                --------->TOE2(3)   --------->ICU4<---------WOX13(1)         <-----------------AGL2          --------->MYB59<----------DOF2       <---------ZAT6 <---------ARR11(3)  <-----------RAV1(1)   agctaatttagttagataccttagattctttgtagccaataattttgaagtgatagatgatcatgatctcagtttaatggctatttgtgggtcaaaggtc  24151200  Previous    Next  AGI:  At1g65000.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G38060.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP21387.1) Range:  from: 24150707    to: 24152352    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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