Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->At4g35610                                          --------->ZAT2                                          <---------At4g35610                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                                     --------->At4g35610                                     <---------At4g35610                                    <-----------ARR10                                    <---------ARR14(2)                                    <---------AGP1                                    --------->GLK1(2)                                    ------->TEIL                                    --------->ARR14(2)                                 --------->ANAC58                                 --------->ANAC55(2)                                 --------->ANAC55(1)         --------->YAB1          --------->MYB52(1)     --------->ANAC46          --------->GLK1(2)     --------->LBD16             --------->ANAC58     ----------------->AGL1    --------->DEAR3(1)           <---------ANAC55(2)  ----------------->AGL2                  -------    --------->DREB2C(2)         <---------LBD16    ----------->HVH21                          ------- <---------ALFIN1            --------->YAB1    <---------ANAC46                               ------- ------>GT1                 <---------ATHB12   <---------ANAC58                             --------- >P<---------LBD16        --------->WOX13(1)   <---------ANAC58 ---------->DOF2 --------->GLK1(2)  --   gtaacaccggcaaaacggagagactcttcaatcatacggatctgagcttccttgtgaccagaatcagaaagttgaacagaagaatcagggtcataaaagc  24139400                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    =                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                               ------                    <-----------ARR10                                                          <-----                   <---------CCA1(2)        <---------YAB1                                     <-----            ------>ZmHOX2a(2)               <-------TEIL                                       ------ -->ANAC58 --------->GLK1(1)             --------->HSFC1(2)        <----------DOF2          --------- -->ANAC58 <---------GLK1(1)          --------->LBD16        <----------DOF2                <-------- -->ANAC46--------->ARR11(3)    --------->AtMYB61           <---------MYB52(1)          <---------REM1(1) ->DOF2   <---------ARR11(3)   --------->MYB46(3)          --------->LBD16           <---------MYB46(3) ------->ICU4   --------->LBD16<---------MYB52(2)     <---------GLK1(1)          <-----------RAV1(2)-   catgatgcatatgatctccccaaatctcttcccacaaacccgaagtttcattgtagaactccgctattccttttcttagcgcctcagtggatgtagcagc  24139500            <-------MYC3           --------->O2     --------->MYB46(3)   ----------->RAV1(1)   --------->DEAR3(1)   <---------ALFIN1  <------NtERF2 <---------RAP2.6(3) <---------ATERF1(1) ------>NtERF2 <-----------HVH21 -------->ANAC46 -------->ATERF1(2) ------>GAMYB -------->RAP2.6(2) ====================MYC_MYB ---------ATERF1(2) -------->RAP2.3(2) -------->RAP2.3(3) -------->RRTF1(2) -------->ANAC58 -------->ANAC58 ------->RRTF1(1) ------->ERF1 ------->ATERF1(1) ------->MYB46(3) ------->RAP2.3(1) -------ATERF1(1) -------At4g35610 ------>At4g35610           <-----------HVH21 ------>ZAT2------->MYC3    <-----------TGA1 ----->DEAR3(1)      <<<<<<<<CAMTA3 ---->MYB46(3)      <-------MYC3 ---->ATERF1(1)     ------->MYC3                                                                   <- --->At4g35610     --------->ANAC46                                                                <- ----At4g35610--------->ARR14(2)                    <------ZmHOX2a(1)                              <- ----ZAT2  <---------TGA1a --------->ETT(2)      <------ZmHOX2a(1)                                 <- --->ZAT2<---------ALFIN1  <---------bZIP60(1) --------->ALFIN1                         ---------->DOF2 >At4g35610--------->TGA1a --------->bZIP60(1)<------ZmHOX2a(1)                     <---------At4g35610 -At4g35610<---------O2   ---------->ID1    --------->ALFIN1                        --------->At4g35610 -------->DEAR3(1)<---------LBD16          <------ZmHOX2a(1)   ---------->DOF2 <----------DOF2   <---   agccgccacagccacgtttccacgcgttgtcgtcatagagactgaggaggaggaggatggagaccgaaagagaagcgatgactttgagccgaaagaagag  24139600                                                                                  ----------->TGA1                                                                                  ----------->HVH21                                                                                <---------ANAC55(2)                                                                                --------->ANAC55(2)                                                      <---------AHL20(2)        <---------O2                                               <----------DOF2                  <---------TGA1a                                              <---------ANAC58                  --------->O2               <---------ANAC58               <---------ANAC58                  --------->TGA1a    <---------HSFB2a(2)                  <---------ZAT6                        <--------------------- --------MYB46(3)                <---------At4g35610  --------->ATHB12   =================bZIP_DOF -----MYB83    <---------ANAC58  <---------ZAT2===========================================bZIP_DOF --------DEAR3(2)                --------->At4g35610 <---------AHL20(2)  ---------->DOF2 -----MYB46(1) <---------ANAC46 --------->ALFIN1     --------->AHL20(2)<-------TEIL -----P --------->DAG2         --------->ZAT18<---------ANAC46        --------->CCA1(2)  <-----------HVH21   ttggttcgataagggaggcttgtgagagaagagggtgctgctagagttgctttcatttattggacgttggagatacaaagaaacgtgacgaagtcaggga  24139700                 --------->ALFIN1            <-----------GT1        <---------YAB1                                                                            ---      <---------ICU4                                                    <----------DOF2      <-------GAMYB     <---------YAB1           --------->At4g35610                       *TSS                 <-------     --------->ICU4----------->HVH21                              --------->TOE2(3)     <----------DOF2  <---------AHL20(2)      <-----------HVH21                     <-----------GT1 ----------->RAV1(1) < --TaNAC69(2)<---------At5g28300<------ZmHOX2a(2)<<<<<<<<<<<<<<<<<LFY   --------->TOE2(3)   <--------   ttatttgattattgttacagtgtgactgtgtgagatcaaactttggatatataacattggaccatttttcttaactttagagccacaaaactttctgttg  24139800        <---------LBD16                                  <----------DOF2                    <--------   --------->ARR11(3)                                    <---------DAG2       <----------DOF2 -------->RAV1(1)                                     ---------->ID1     <----------DOF2  <---------ICU4 --At4g35610          <---------ATHB12               <-----------GT1     <---------DAG2   <--------HAHB4 ---------ALFIN1  ------------>CBF         <----------DOF2            <-----------GT1    <---------ATHB12 ---RAV1(1) ---------->DOF2  --------->REM1(1)     <-----------GT1<------------------------ANAC81   ccacaggtcttggggaaagggccaatcgtctacatccacttatcactttgatttttctcctttttttttgtttaacttttctttttcttccatcatttta  24139900                                                                                <---------ICU4                                                                   <---------------AGL15                                                                   --------------->AGL15                                                                  <-----------------AGL2                                                                  ----------------->AGL2                                                                  <-----------------AG            <--                                                                  <-----------------AGL3          <--              ---------->DOF2       <---------YAB1        ---------->DOF2      --------->ICU4     <--           <---------ZAT6  --------->ANAC58            --------->ANAC58     <---------YAB1     <----- ----------->GT1     --------->At4g35610               --------->ANAC58   ----------->GT1      ------ -YAB1   ----------->GT1   --------->ANAC58      --------->ZAT14 --------->At4g35610      <----------   gttttgtaatttagtgaaaagtcagtggcaaacaaatattgatagaagaagtgaagtaagcaaagagagcttaatatggtaattgtgacaactatcacat  24140000                                                                                                -----                                                                                                -----                                              <------MYB46(1)                                   -----     <------ZmHOX2a(1)                        <------MYB83             ----------->GT1        <------ -------ANAC58                               --------->MYB59          --------->DAG2         -------- -------ANAC58      <---------ZAT18 <---------ANAC55(2)              ---------->DOF2         -------- -------ANAC46   <---------ANAC46   <---------ANAC46              ----------->GT1    --------->At4g35610 --MYC3          <---------O2       <---------TOE2(3)        <---------AHL20(2)      <---------At4g35610 ->MYC3          --------->O2       --------->ANAC55(2)      --------->AHL20(2)----------->GT1------- -HVH21      ------->TEIL          <---------LBD16       ----------->GT1     ---------->DOF2 --------   gcttgtaggactatgagcctcgtggacaccgttctattacggatgagtaggttagagaaagattaaaatggtaaagtacaaaagttaatctgactaccca  24140100 <---------MYB52(1)                                                              ----------->GT1 ---->MYB52(1)                                                                  --------->ALFIN1 ->MYB83----------->GT1                                                       ----------->GT1 ->MYB46(1)                           --------->AHL20(2)    <---------AHL20(2)<---------ANAC58 ---MYB59                         <----------ID1         <---------AHL20(1)   <---------ANAC58 ->ANAC58                         ----------->GT1        --------->AHL20(1)   <---------ANAC46 ->ANAC58 --------->WRKY18(1)   ---------->DOF2          <---------ARR11(3)  <------MYB83 -->MYB46(3)          --------->KAN4(1)     <-----------RAV1(1)              <------MYB46(1) ->ANAC46<-----------HVH21 ----------->GT1 --------->ARR11(3)              <--------P       <--------   actgtttgtccggtcaaaaatggattattcagaaaaaagaaaaaatatgttggaaacaatatttttttttttttttggtagggtggaaacaattcttttt  24140200                             <---------ARR11(3)                       <---------AHL20(2)                       <---------AHL20(1)                 <---------ANAC46                 <------MYB83--------->ARR11(3)                 <------MYB46(1)                 ----------->GT1                --------->MYB59                      <----------DOF2     ----------->GT1   --------->AHL20(1)         <-----------GT1             <---------AHL20(2)   <---------WOX13(1)  --------->ARR11(3)  --------->YAB1          --------->AtLEC2 --DOF2         <---------MYB46(3)      <----------DOF2       <-----------GT1 --------->AHL20(2)   ttttgactgataaatagttgggtaatatatagatattgtttcctttgataattttcttttcttctaaccatgctcaccatttaaatccaaaaatgaagaa  24140300  Previous    Next  AGI:  At1g64970.1    Description:  G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE). Identical to Tocopherol O-methyltransferase, chloroplast precursor (G-TMT) [Arabidopsis Thaliana] (GB:Q9ZSK1;GB:Q9XIP9); similar to SMT2 (STEROL METHYLTRANSFERASE 2) [Arabidopsis thaliana] (TAIR:AT1G20330.1); similar to gamma-tocopherol methyltransferase [Brassica oleracea] (GB:AAO13806.1); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216) Range:  from: 24137748    to: 24139772    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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