Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->TGA2(2)                                                          <-----------HVH21                                                         --------->ANAC58                                                         --------->bZIP60(1)                                                         <---------bZIP60(1)                                                         --------->ANAC46                                                         <---------TGA1a                                                         --------->ANAC58                                                         --------->bZIP60(2)                                                         <---------TGA2(1)             ----------->RAV1(1)                                                         <---------O2         --------->WOX13(1)                                                         --------->TGA1a    <---------ATHB12                                                         --------->O2    <---------AHL20(2)     -----                         <---------ARR11(3)  --------->RAP2.6(2)         --------->AHL20(2)  <-------          >>>>>>>>>>>>>>>>>LFY<-----------HVH21<------NtERF2   <---------ARR14(2)    <---------ZAT18 <---------YAB1          --------->ARR11(3)  --------->ANAC58  --------->ARR14(2)    --------->ZAT14 --->ANAC58     --------->ATHB12             --------->ANAC58 <---------CCA1(2)      <---------ZAT14 --->ANAC58    <---------ATHB12     --------->YAB1      <-----------STF1--------->AHL20(2)   --------   gtcatcatatatagccaatgtttggaatatcatgtcaactataacaggcgcaatatcagacgtcatatctgcaaataaatcattcagagcaccagttcaa  24085300                                  <---------ARR14(2)                  <---------ARR14(2)     <---------ZAT14          --------->ARR14(2)      --------->ARR14(2)                                           ------ ---------->AtSPL8--------->ARR14(2)     --------->ZAT14                                       <----- --ZAT14  <---------ARR14(2) <------ZmHOX2a(1)                                   ----------->GT1 ->ZAT14 <---------CCA1(2)  <----------ID1                   --------->TOE2(3)  <---------TOE2(3)  <-   tgtacaatctcatatctgcaaatacttctaaggacaaatccagttcaatgtgaatgttttgaacattaaacttcaaatgactatggtttaatacgagttt  24085400                                                                                             <-------                                                                                            ---------                                                                                            <------ZmHOX2a(2)                                                                                            ---------                                                                                           --------->ARR11(3)                                                                                           <---------ARR11(3)                                                                                           --------->ARR11(1)                                                                                           <---------ARR14(3)                                                                                           --------->ARR14(3)                                                                         --------->LBD16   <---------ARR14(2)                                                                        <---------LBD16    --------->ARR14(2)                                                                       <---------ANAC46   <---------HSFB2a(1)                                                                   --------->ARR14(2)     <---------HSFC1(2)                                                                   <---------ARR14(2)     --------->HSFB2a(1)                                                                   <-----------ARR10     ---------->TaMYB80                                                              --------->LBD16  <---------YAB1------>ZmHOX2a(2)                                                             <---------HSFB2a(2)         ----------->ARR10                                                             --------->HSFB2a(2)     <---------ANAC58                                                          --------->GLK1(2)   --------->ARR11(3)                                                         --------->GLK1(1)   <---------GLK1(1)                                                    <---------LBD16--------->GLK1(2) <---------ANAC58         <---------YAB1    -------->ATHB1          --------->MYB52(1)  <---------LBD16 <------NtERF2        <---------KAN4(2) --------->ICU4       <---------MYB46(3) <---------GLK1(2) <---------LBD16 --->ZAT14      ----------->RAV1(1)        --------->ATHB12 <---------LBD16  --------->GLK1(1) ----ZAT14      <<<<<<<<<<<<<<<<<LFY      <---------YAB1 <---------GLK1(1)  ---------->TaMYB80 ------ --------ZAT6--------->ANAC46           --------->YAB1--------->LBD16 <---------LBD16<---------ANAC46   agtcttagagtataatcgcaacagtggaattattcgaatcgataatgaatggttaccggaattctggagaatctcggggatatcatggcggaagatccgg  24085500                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                            ------>NtERF2                                                                                         --------->LBD16                                                                                        <---------LBD16                                                                                     <---------WRKY18(1)                                                                                    ----------->HVH21      ---------->DOF2                                                 <---------ANAC58 -------->ZAP1< <---------YAB1   --------->REM1(2)                           --------->ANAC58     <---------WOX13(1) --LBD16       <---------ANAC58                             ---------->DOF2  --------->ANAC46   <---- >ARR14(1)     <---------ANAC58                          ------->GAMYB<---------ANAC58 <---------LBD16 >CCA1(2)      <---------ANAC46                       --------->MYB52(1)    <---------LBD16<---------PCF5 --->LBD16--------->ALFIN1                   ----------->ARR10--------->ANAC58--------->LBD16 <------   agtctgattaaagtggagcttgtagagacagagccagagatggagagaagagactccaacggagaagccatttctttccacggagattgaccggggccag  24085600     <-----------HVH21    <------MYB46(1)    <------MYB83   --------->MYB111(1)   --------->MYB59   --------->MYB46(2)  <--------P ------MYB46(1) ---------MYB46(3) --------MYB46(3) ------->MYB111(2) --------AtMYB61                                                                             <------- ------->MYB59                                                                               <------- ------->MYB46(2)                                                                           <-------GAMYB ------->MYB111(1)      ----------->GT1           <<<<<<<<<TBF1                            <------MYB46(1) -------MYB55(1)       ----------->GT1         <<<<<<<<<TBF1                               <------MYB83 ------P            ---------->DOF2         <<<<<<<<<TBF1                                 *TSS ------ ------MYB83    --------->YAB1        <---------HSFC1(2)                           --------->ANAC58 -----ZAT2     <<<<<<<<<ARR2          --------->HSFC1(2)               <---------TOE2(3)  <---------MYB46(3) -----RAV1(2)  <<<<<<<<<ARR1     --------->At5g28300        <-----------RAV1(1)    --------->ANAC58   gttggtaggtcagaacaatcgtaaaagggtaaaacggtgaagcttcttcttcttcttcgtctctgtggctactagggtttaggctaagccagtgggttag  24085700                                                                          <---------MYB46(3) <---------HSFB2a(2)                                                  <------MYB83 --------->HSFB2a(2)                                                  <------MYB46(1)           <---- -P<---------At4g35610                 ---------->DOF2               --------->MYB59       ---------- --MYB52(1)                       ------->TEIL                   <---------TOE2(3)      <-----------TBP --->MYB52(2)    ---------->DOF2  --------->GLK1(2)          <----------DOF2           <----------DOF2   tttgcagaagatgaagagtgaaagaaactgaaaatgaatctgaaagtttgtttttgggcttcgatttaagtttggtttgttcattcgggcttttaaagtc  24085800                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                           --------->AHL20(1)                                                                               ------>ZmHOX2a(2)                                 <---------ANAC58           <---------ANAC58  <------ZmHOX2a(2)                     <-----------RAV1(1)       <---------ANAC46----------->GT1--------->CCA1(2)   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <---------AtMYB61 ----------->GT1<---------AGP1--------->AHL20(2) --------->YAB1     <---------TOE2(3)   <----------DOF2     <---------ANAC58 --------->AGP1<---------AHL20(1) ---TEIL       <----------DOF2   <---------ANAC46           <---------ANAC46 <---------ARR11(3) >DOF2   --------->ARR14(2)      <---------ANAC58      --------->GLK1(2)     --------->ARR11(3)   catggataatggattcacttttaatgttggaatttgtgtgtgttttttggtgggaagaatttgtgtgttaaaaaaactagatctaagacaaaatataatt  24085900                                                                                            <--------                                                                                    --------------->AtSPL8                                                                                   --------->GLK1(1)                                                                        <---------MYB52(1)  <--------                                                                       --------->LBD16      ---------                                                                     <---------LBD16<---------------AtSPL8        ----------->RAV1(2)     <-----------HVH21               <---------YAB1    <---------ARR14(2) >AHL20(2)                     <----------DOF2              <----------DOF2       --------->ARR14(2) -YAB1<-----------GT1   --------->LBD16  <------ZmHOX2a(1)  <---------DAG2      --------->LBD16 -AHL20(2)------>ZmHOX2a(1)<---------ALFIN1                 ------>ZmHOX2a(1) <---------LBD16      <-   aggggttttctcctgtcttctctctccccaaacctttcagagaggagacaccatcgttcatcctttttgattccggtttgtccggatttgtacatattct  24086000                                                 --------->ANAC46                                                <---------ATERF1(2)                                                --------->ATERF1(2)                                               <---------LBD16                                               --------->RAP2.6(3)               <xxxxxxxxxxxxxxxxxxx                                              -------->P                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                              --------->MYB52(1)       <----------DOF2                                            ==============================HOX2a_HOX2a                                            ===============================HOX2a_HOX2a                                            ------>ZmHOX2a(1)      <---------GLK1(1)                                           <---------ANAC58        <<<<<<<<<GATA-4                                         <-----------------AGL1    <------ZmHOX2a(2)                                       --------->GLK1(1)           <<<<<<<<<GATA-3                                       <---------GLK1(1)           <<<<<<<<<GATA-2                                      <---------ARR14(2)          <---------ARR11(3)                                      --------->ARR14(2)<xxxxxxxxxxxxxxxxsmallRNA(i)                                    <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)------>ZmHOX2a(2) -ARR14(2)                  <----------DOF2<---------ANAC58       <---------AGP1------->GAMYB -GLK1(2)            xxxxxxxxxxxxxxxx>smallRNA(i)--------->LBD16  --------->ARR11(3) >ARR14(2)        --------->DAG2   ------>ZmHOX2a(2)---------->DOF2<<<<<<<<<GATA-1 --------CCA1(2) ---------->DOF2   ================HOX2a_HOX2a   <---------CCA1(2)  <xxxxxxxxxxxxxxxxsmallRNA(i)   cgtctctgtgcgagataaataaagttccgactttagatcggatttccttaccggcaaagtctggtttagatctcttttacaactgcgatgtcgaagccct  24086100                                                          --------->ANAC55(2)                                                          <---------ANAC55(2)                                                <---------ARR11(3)            --------->ARR14(2)                  --------->ARR11(3)            <---------ARR14(2)                 <---------CCA1(2)            <-----------ARR10         <---------LBD16 <-----------TGA1                XXXXXXXXXXXXXXX           <---------CCA1(2)         <---------ANAC46 <-----------HVH21             ---------->DOF2    XXXXXXXXXXXXXXXXXXXX>MIR773   <----------DOF2    --------->ANAC46             <xxxxxxxxxxxxxxxxsmallRNA(i)   <-----------GT1      ------>ZmHOX2a(2)    --------->YAB1   <---------YAB1    <------ZmHOX2a(1) xxxsmallRNA(se3)      --------->GLK1(1)     --------->AHL20(2)          <-----------HVH21        ---   ctgttttacttccaaatctcgtctgatctctctaatcttttgtggaattatatcttcgtcacttatttttgctcatgtcataggagcaaagaacagatta  24086200  Previous    Next  AGI:  At1g64790.1    Description:  binding. similar to putative translational activator [Oryza sativa (japonica cultivar-group)] (GB:AAT77858.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38767.1); similar to HEAT repeat, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX95705.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 24068600    to: 24085690    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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