Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <----------DOF2                           <---------ANAC46                           <---------ANAC58                                 <---------ARR14(2)                          ------>NtERF2                                     --------->ARR14(2)                        <---------DEAR3(1)                                  ------->TEIL                        <------NtERF2                              ------>NtERF2                       --------->LBD16                            <---------ANAC58                     --------->ATERF1(1)                          ----------->HVH21                     <---------LBD16                              <---------RAP2.6(2)                     <------NtERF2                                <---------ETT(2)                    <---------ZAT2                                --------->ETT(2)                   <---------ARR14(2)                             <---------ANAC58               ----                  --------->ATERF1(1)         --------->DAG2     --------->ATERF1(1)           ------        --------->At4g35610<---------ANAC58  ---------->DOF2     <------NtERF2           --------->ALFIN1      --------->DAG2--------->ZAT2      --------->ARR11(3)      <---------ATERF1(1)      <---------REM1(1)     ---------->DOF2------>NtERF2--------->LBD16            <---------AtMYB61          <------MYB46(1)  <------ZmHOX2a(1)--------->ARR14(2)   <---------ARR11(3)  <-----------RAV1(1)        <------MYB83 ---------->GT1   <------NtERF2 <---------ANAC46 <----------ID1<---------DEAR3(1)<---------MYB52(1)   tagaggaaaaagctgaagtcggagccggggcgttcagggtaagagcttaaagcgaagaagctatggtggcgaccgatgaatccgttggaaggtgtaccaa  24065900                                            <---------At4g35610                                            <------NtERF2                                            --------->At4g35610                                           ----------->RAV1(1)                                         --------->At4g35610                                         <------NtERF2         --------->GLK1(2)            <---------At4g35610       --------->YAB1         <---------ARR14(2)           --------->At4g35610      --------->ICU4         --------->ARR14(2)         ===================RAV    --------->ANAC58 <---------ZAT18 ----->DAG2                         <-----------RAV1(2)       --------->ANAC58<---------ZAT6      --- ---->DOF2   --------->LBD16--------->CCA1(2)       <------ZmHOX2a(1)   <-------TEIL   <---------ANAC46   aggcgaatgcgaatccgaagaggtagtaagagatggctccagcggcagcatcaaggacattggtaagcatgatgttcatagtgttcttggctcggactga  24066000                                                                       --------->ETT(2)                                                               <---------ANAC55(1)                                                               <---------ANAC55(2)                                                            --------->ARR11(1)                     <-                                                 <------NtERF2 --------->ANAC55(2)                ---                                               <---------DEAR3(1)      <---------ETT(2)           <--                                              <---------LBD16--------->CCA1(2)                    ---                                 ---------->DOF2--------->LBD16<---------ANAC58                   ---                           <---------AtLEC2  <------MYB83   --------->ARR14(2)                    <--                          <-------TEIL       <------MYB46(1)<---------ARR14(2)                 ------                       --------->At4g35610  --------->MYB46(2) <---------ANAC58        <-----------HVH21                       <---------At4g35610  <---------DEAR3(1)<-------TEIL            <-----------RAV1(1)                       --------->ZAT2       --------->MYB111(2)<---------ANAC46       <---------ANAC46                 <---------ARR14(2)        <--------P      <---------GLK1(1)<------NtERF2<---------ANAC46     ---------->DOF2   <---------ZAT2   --------->ANAC58  ----------->ARR10------>NtERF2 --------->ETT(1) --->ZmHOX2a(2)  --------->ARR14(2)     --------->ANAC58 <------ZmHOX2a(1)--------->ANAC46 <------NtERF2   tccagcacaaagcatagcgaaaccgagctgcatggcaaagacaaggtaggcggagaagaggagatacgtgttgtcgacggcataagttgtgtcggagagt  24066100                                           <---------ANAC46                                        <-                                          ------>NtERF2                                   <------ZmHOX2a(2)                                          <------NtERF2                                   --------->CCA1(2)                                         ------>NtERF2                                   <---------ARR11(3)                                        <------NtERF2                                    --------->ARR11(3)                                        <---------DEAR3(1)                               --------->ARR14(2)      --------->ARR11(3)               ------>NtERF2                                     --------->AGP1      <---------ARR11(3)               <---------At4g35610                   ====================HOX2a_HOX2a ------GAMYB                           --------->At4g35610                   =====================HOX2a_HOX2a ------>MYB52(2)                       <---------LBD16                       <------ZmHOX2a(1)------- -------MYB46(3)>>>>>>>>>CBP60g        --------->LBD16                   <---------ARR14(2)  <------- ------>MYB111(2)                    <---------RAP2.6(2)                 --------->ARR14(2)------>ZmHOX2a(2) ------>MYB55(2)>>>>>>>>>SARD1 <---------TOE2(3)    <---------ARR11(3)  =========================HOX2a_HOX2a ---------RAV1(1)              --------->DAG2       --------->ARR11(3)  <------ZmHOX2a(1)<---------AGP1 ------>MYB.PH3(2)           ---------->DOF2      ----------->ARR10     ==========================HOX2a_HOX2a   ttgttggagatgtttgaaatttgggaacataaaaaggttgccgcggcgagggaagatgttgagttagaagaagaggataggagggcagatagatctacgg  24066200               <---------ANAC46           <-------GAMYB           <---------ANAC58           <---------ANAC58          <---------MYB46(3)      --------->ALFIN1      <---------AtMYB61     <-------MYC2                                                                   <----------DOF2     ------->MYC2                                                           <-------MYC3     ------->MYC3                                                           <-------MYC2       <-----     <-------MYC3                                          <---------ZAT18  ------->MYC2       <----- -----NtERF2<--------P                                     --------->ZAT18  ------->MYC3     *TSS -->ANAC46--------->MYB55(2)       <xxxxxxxxxxxxxxxxsmallRNA(i)  --------->ATHB12  <---------ANAC58 --LBD16 <---------AtMYB61 <---------ANAC46              <---------------AtSPL8    <---------ANAC58   cagagcatgtggtggttgcggtgtccatggtggagagggagggagggagagatagagagagggtacttgattgtggaacgtgtttgcttaagtgagtact  24066300                                                      <---------TGA2(1)                                                      <---------bZIP60(1)                                                      --------->REM1(1)                                                      --------->bZIP60(1)                                                      --------->TGA2(1)<---------SPL7                             ----------->GT1       <---------MYB52(1)--------------->AtSPL3                        ---------->DOF2          <---------ANAC58    <---------ANAC58                       <---------AHL20(2)        <---------ANAC58    --------------->AtSPL8                     <-----------TBP           <-----------GT1       <---------ANAC58                 <---------ANAC46           --------->AHL20(2) --------->DAG2 ----ANAC58    <---------ANAC46   ---------->DOF2----------->GT1    <---------LBD16             <---- ----ANAC58 <----------DOF2 ----------->GT1 <---------AHL20(2)---------->DOF2  <-----------GT1  <----   tgtggtgagagtgtctttggtgtatttaaagtggaaaaaagcatatttatttcgttacatcacaaaaagttgcggtactacttactcttcttctagttga  24066400                                                                                        --------->AHL20(1)                                                                                        <---------AHL20(1)                                                                                        --------->AHL20(2)                                                                                        <---------AHL20(2)                                                                                    <---------AHL20(2)                                                                                    --------->AHL20(2)                                                                                --------->AHL20(2)                                                                                <---------AHL20(2)                                                                               --------->AHL20(2)                                                                               <---------AHL20(2)                                                                               --------->AHL20(1)    ---------->DOF2                                                            <---------AHL20(1) -----TOE1(3)                                                 --------->YAB1--------->YAB1 -----TOE2(3)               --------->GLK1(2) <---------TOE2(3)     --------->YAB1 --------->AHL20(2)   ggttttaaaagaagttttctgaattttaaaattctaggtctctggtttaagtttttttaaacagtagtaatcaaactaaaataaaattaataaatttgtt  24066500                                                                                       <---------AHL20(2)                                                                            --------->YAB1                                                                           <---------YAB1                                                                          <---------AHL20(2)                                                        ---------->DOF2   --------->AHL20(2)                                                   <---------AHL20(2) <---------AHL20(2)                                                   --------->AHL20(2)<---------AHL20(2)--------->AHL20(2)                                               <---------AHL20(2) <---------AHL20(2)  --------->AHL20(2)                                            ----------->GT1     <---------CCA1(1)  <---------CCA1(1)                                           <---------TOE2(3)    <---------RVE1(1)  <---------RVE1(1)                                           <---------TOE1(3)   <---------ARR11(3) --------->ARR11(3)<                                          ---------->DOF2      --------->ARR11(3) <---------AHL20(1)<                                         <---------AHL20(2)    <---------GLK1(2)  <---------ARR11(3)<   ttggtatagttttgttttagtttctattcagttttgaacatatttaaagttaattttttaaagaagatttttttattttaataagatatttaatcagttt  24066600                                                              <---------MYB52(1)                                                            <---------ANAC58                                                            <---------ANAC58                                                      <---------AHL20(1)              <---------TOE2(3)             --------->HSFB2a(1)         <---------AHL20(2)                 <---------HSFB2a(1)        <---------AHL20(2)              ----------->GT1     <---------ANAC46        --------->AHL20(2)            ---------->DOF2 <---------AHL20(2)        <---------AHL20(1)       ----------->GT1     --------->YAB1 ---------ANAC46                 <----------ID1     <---------YAB1          ----------->GT1    ------ ---------ANAC58               ---------->DOF2    --------->YAB1   <---------ZAT6              ------ ---------ANAC58           --------->AHL20(2)    <---------YAB1  <---------ANAC46 <---------YAB1   --   ttgtgtgcaattaattttggttatacgaataaaaaaagaaaaaagaaaattcttataatatttcgtttagtgtttgaatcgtttattttagtatgacaag  24066700                                                               ---------->DOF2             <---------YAB1                                                        --------->ANAC46                 --------->CCA1(2)                                      <---------ICU4    --------->ANAC58                <---------ARR14(2)                                  <---------AHL20(2)    --------->ANAC58           ----------->TGA1                              <---------AHL20(2)   --------------->AtSPL3          ----------->HVH21    <-----------HVH21         <---------AHL20(1)   --------------->AtSPL8        --------->At4g35610 --->ANAC58                   --------->AHL20(2)   <---------------AtSPL8      --------->YAB1       < --->ANAC58                   --------->AHL20(1)   <---------------AtSPL3    --------->ANAC58       - ------->GLK1(2)   <---------YAB1 --------->AHL20(2)   --------->SPL7        --------->ANAC58    <---   gaatcgggtcagcatttgtttatgagaaacaattaattaaacatcgctacatagaagtacgacattaaagaacaagttcaagcatatgacgatatgattc  24066800  Previous    Next  AGI:  At1g64780.1    Description:  ATAMT1;2 (AMMONIUM TRANSPORTER 1;2); ammonium transmembrane transporter. Identical to Ammonium transporter 1 member 2 (AMT1.2) [Arabidopsis Thaliana] (GB:Q9ZPJ8;GB:Q9SQH8); similar to AMT1,3/ATAMT1,3 (AMMONIUM TRANSPORTER 1,3), ammonium transmembrane transporter [Arabidopsis thaliana] (TAIR:AT3G24300.1); similar to AMT1,1 (AMMONIUM TRANSPORT 1), ammonium transmembrane transporter [Arabidopsis thaliana] (TAIR:AT4G13510.1); similar to ammonium transporter, putative [Arabidopsis thaliana] (TAIR:AT4G28700.1); similar to Ammonium transporter 1 member 2 (LeAMT1;2) (GB:O04161); similar to Ammonium transporter [Lotus japonicus] (GB:AAM95453.1); simi Range:  from: 24064433    to: 24066293    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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