Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------YAB1                                                                <---------AHL20(2)                                                               <---------AHL20(1)                                                               --------->AHL20(1)                                                               <---------AHL20(2)                                                               --------->AHL20(2)                                                           --------->AHL20(2)                                <---------AHL20(2)         <---------AHL20(2)                       -                               --------->YAB1           ----------->GT1                          ----                   --------->AHL20(2)             <---------TOE2(3)                              ----         <---------DAG2      <-----------------AGL3     --------->YAB1                          <----      <---------ALFIN1--------->ICU4             --------->MYB52(1)                        --------->AHL20(2) -KAN4(1)<----------DOF2 <---------YAB1<--------P<---------DOF5.7(2)----------->GT1     <---------ICU4   cattacgaccactttaaccgataaattatgaaataaaaatggtaagtgagttaacgaatgataaatttattagtaaaaacaaatagaaactaattacata  24060700                                                                 xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                             <---------AHL20(2)                                                             --------->AHL20(2)                                                            <---------AHL20(2)                                                            --------->AHL20(2)                                                         <---------AHL20(2)                                                         --------->AHL20(2)        --------->ARR11(3)                               --------->AHL20(1) -------->AHL20(2)                                      --------->AHL20(2)     <---------AHL20(2) ----->YAB1             ------->TEIL                    <---------AHL20(2)     --------->AHL20(2) ----->ANAC55(2)     ----------->GT1                  --------->YAB1           --------->AHL20(1) ---TEIL<---------ARR11(3)                          --------->AHL20(2)        --------->AHL20(2)   cataatataaggtctattttgtcatgtatatatacaattgtcttctatttcaaaaaaaataatttaaaaaaaaaaaaaaaaaaaattgtcttctatttca  24060800                                                                                 <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                                --------->AHL20(1)                                                             --------------->AGL15                                                             <---------------AGL15                                                    ------>MYB83                <---------AHL20(2)                                                    ------>MYB46(1)      <---------At4g35610                                                  --------->AtMYB61      --------->At4g35610                                                --------->SPL7      ----------->GT1                                            <------NtERF2    <---------HSFB2a(2)<---------AHL20(1)                          --------->ANAC58  <---------LBD16 ----------------->AGL2                         --------->DAG2   <---------ARR14(2)<-----------------AGL3           <-------           ----------->GT1--------->ANAC58--------->ARR14(2)----------------->AGL3           --------        --------->YAB1  ---------->DOF2 <---------ATERF1(1) <-----------------AGL2   <-----------GT1       <---------YAB1--------->YAB1   --------->LBD16   <---------MYB52(1)    ------->TEIL  <--------     --------->YAB1 <---------YAB1------->TEIL--------->LBD16--------->HSFB2a(2)--------->AHL20(2)   atttcaacgatgatagtaaaatatgataaagcaatgcatccgaggctccggaccatccgttttctataagtagtaagatgaatttattttctattttaaa  24060900                                                              <---------ICU4                                    ---------->DOF2          --------->ICU4                            --------->YAB1                  --------->ANAC55(2)                           <---------ATHB12           <---------YAB1              --------->AHL20(2) --AHL20(2)               ------>MYB46(1)           --------->YAB1    ----------->GT1              -- ->AHL20(2)               ------>MYB83    --------->AHL20(2)<---------ANAC55(2)--------->YAB1      -- -AHL20(2)               --------->WOX13(1)         <---------ICU4   --------->ALFIN1     <------ZmHOX2a(1)   tattagttattcagaaaatttgaagaccaatcaaaaacaaaagattaaacaaaatcatggttacttattatgtggtgataacaataacataaggacgacc  24061000                                      --------->ARR11(3)                         ---------->DOF2                  <---------YAB1      --------->GLK1(2)                  ----------->TBP     <---------ARR11(3)             --------->YAB1          --------->RVE1(1)  --------->YAB1            --------->ICU4 <----------ID1    --------->YAB1                       ---------->DOF2            <---------YAB1 ----------->GT1  <---------YAB1<---------YAB1       --------->YAB1       < ------->ANAC58 --------->YAB1       --------->CCA1(1) ----------->GT1        <---------YAB1     <--- ------->ANAC58<---------YAB1      --------->AHL20(2)  <---------YAB1       --------->YAB1-----------   caagacaacttcttatgattataaaaaaaaagaaaaaaaaaatcttatgatcagaaaatgataatttgataagctcgtttataataaagcttgacaattc  24061100                <------NtERF2               <---------MYB46(3)              <---------RAP2.6(2)            <------MYB46(1)            <---------MYB46(3)            <------MYB83            --------->MYB52(2)           <---------DEAR3(1)          <---------MYB52(1)         <-------GAMYB --------->ZAT18     <----------DOF2   <---------ZAT18  *TSS  <---------ANAC58  <-----------GT1      --------->ZAT14                                          <---------CCA1(2) ---------WOX13(1)     <---------ZAT14           <----------DOF2     ----------->RAV1(1)  ------>ZmHOX2a(1) ------YAB1<---------AtMYB61                 <---------CCA1(2)      --------->ANAC46<----------DOF2 ->CBF  <---------ANAC58                  ---------->ID1    <----------DOF2  ---------->ID1    ------   tgattaactttcgttggtggctaagtccactacaaacttcatttgtcttatcttttcttctcctttctctccaccatttgtcttatcttttcctctcctt  24061200                         <----------DOF2                     <---------CCA1(2)                                 <---------At4g35610                   <---------CCA1(2)                 <---------RAP2.6(3)    ------>ZmHOX2a(1)       -            <---------ANAC58                        ----------->GT1    --------->At4g35610 <---------ICU4 >ZmHOX2a(1)<---------ANAC58   <----------DOF2 ---------->DOF2         <---------ZAT2     --------->AHL20(2)   actctccatcaatggcttctcttatctctttttctttgctcccaaaaccaaaagccgtaagaagttcaatttcagctcctcagacacagacaataaatac  24061300                                  <---------AHL20(2)                           --------->DAG2                         ---------->DOF2                      --------->ANAC58  <---------HSFB2a(2)                      --------->ANAC58  --------->HSFB2a(2)               <---------TOE1(3)             --------->AHL20(2)  --------->AHL20(2)                       <---------TOE2(3) --------->DOF2      --------->SPL7     <---------LBD16     ------>ZmHOX2a(1)              <-------TEIL   tgaaaagcttgaagataaattcggacgaaaaggcataaaattctcggaatcaaacaacattcctatggtagagcttaaggtcagaaatggaagttcatta  24061400                                                                               <---------REM1(2)                                                                            =========================                                                                            <----------DOF2                                                                            ------>ZmHOX2a(1)                                  --------->ANAC46                --------->HSFB2a(2)                       ------->TEIL   ---------->DOF2             <---------LBD16             <---------GLK1(2)    --------->ANAC58            --------->ARR14(2)                    <            <---------At4g35610   --------->ANAC58 ---------->DOF2<---------HSFB2a(2)               <            --------->At4g35610 ---------->DOF2 <---------HSFB2a(2)  <------ZmHOX2a(1)              -       --------->WOX13(1)<----------DOF2    <---------ZAT14   <---------ARR14(2)               <-----   aaactgagtctatcagatgctcatgtactttcatataagccaaaggtatactggaaagacgagggattcgaggaagtcctttacacagttgatggtgatg  24061500              <------MYB46(1)              <------MYB83             <---------MYB46(3)             --------->MYB55(2)             <---------DEAR3(1)             --------->MYB111(1)             --------->MYB46(2)             <---------AtMYB61             --------->MYB111(2)            <---------MYB55(1)            <--------P           <-------GAMYB          <---------ANAC46       --------->ALFIN1                     --------->MYB52(1)                            <---------ARR14(2)     ==============MYC_MYB                  ---------->DOF2                        <-----------HVH21     ==================================================bZIP_DOF                 <---------ANAC58     <---------TGA1a                      --------->TOE2(3)          <------ZmHOX2a(1)    --------->ARR11(3)    <---------AtMYB61                ----------->ARR10            <-----------RAV1(2)    --------->YAB1 ==============bZIP_DOF          <---------------------WRI1       <---------LBD16 <---------ZAT6 ---------At4g35610             <---------LBD16     --------->ARR14(2)          <---------ANAC58 ---------ZAT14              <---------DOF5.7(2)    <---------ARR11(3)      <---------WOX13(1)<------ -------->At4g35610        --------->DOF5.7(2)      <---------ARR14(2)    --------->ATHB12--------->ARR14(2) ----YAB1<------NtERF2   --------->YAB1 ------->TEIL--------->ARR11(3)   <---------YAB1<---------TOE2(3)   agagcagaggtggggttggtgttgttatcgtaaacggggaagaacctaaaggagggtcttcagtaatctcaggatgtgattggagtgtcaaggatactga  24061600  Previous    Next  AGI:  At1g64770.1    Description:  carbohydrate binding / catalytic. similar to carbohydrate binding / catalytic [Arabidopsis thaliana] (TAIR:AT1G55370.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO23488.1); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding; (InterPro:IPR011013) Range:  from: 24061102    to: 24063224    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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