Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                  <---------ICU4                    =                                                                  --------->ATHB51                  <                                        --------->MYB52(2)       <---------YAB1                     <            --------->CCA1(2)         <---------MYB52(1)         --------->ICU4                     <       ---------->DOF2              <---------ZAT6    --------->AHL20(2)                            <     <---------YAB1                <---------YAB1<---------YAB1--------->YAB1         --------->TOE2(3) --------->GT1            <----------DOF2  <---------AHL20(2) <---------ATHB12<---------ZAT6        -   acggtttataaaagataagaagttttttctttcacttattgttagttaattttgaataaaacaaatcataatttcacatagtattaaacctatatatgta  24047800        ----------->GT1       --------->DAG2     ---------->DOF2 --------------->AGL15                                                      <-----------------AG <---------------AGL15                                                    --------->ARR11(3) -----------------AGL3                                                    <---------ARR11(3) =============================================================================================MADS_MADS ---------ANAC55(2)                              <---------ATHB12        --------->RVE1(1) -----------------AGL1--------->ANAC55(2)       -------->P               --------->CCA1(1) -----------------AGL2<---------TOE1(1)        --------->WOX13(1)    --------->AHL20(2) -----------------AG  <---------ANAC55(2)      <-----------GT1   ----------->GT1 ---------------->AG--------->CCA1(2)    --------->AHL20(2)  <-----------GT1=========================   ttacttaaaaaggtaaaatttgatacgagatgaataaacaaaaaaaaatcaaccatttcaaatttacatgttaaaatatctcgatttggatatagtcata  24047900                                                <---------YAB1                                              --------->YAB1                                    --------->ATHB12                     <---------AHL20(2)      --------->ICU4                     --------->AHL20(2)    --------->WOX13(1)       --------->YAB1          <---------AHL20(2)     --------------->AGL15        <---------ARR11(3)                   <-        <---------AHL20(2)       <---------------AGL15        --------->ARR11(3) <-------TEIL     <--       --------->AHL20(2)       <-----------------AGL1   ----------->GT1 <-----------GT1          --- ================================================MADS_MADS    --------->GLK1(2) --------->AtLEC2 ----   tagagatgattttatattgatatataaatcgccttcacttattggcaattagtattgagttgaaaatctataatttttctacatgcattgattcaactat  24048000                            <---------ANAC58                 --------->AHL20(1)      --------->ANAC46  <---------ANAC58  <-----------HVH21     <---------ANAC58                                --------->TOE2(3) <----------DOF2 <---------AHL20(2)                                    <--------HAHB4 --------YAB1    <---------AHL20(1)                                    --------->ATHB12 -------ARR11(3) --------->AHL20(2)                                    <---------ICU4          <----- ------>ARR11(3)--------->AHL20(2)       --------->TOE2(3)            --------->ICU4           ------ ----->YAB1--------->AtLEC2 <---------ANAC58                          <---------YAB1       --------->AHL20(2)   tatctttcacatcatgcattaaattagcttgggttccatcgtacattagtgtatacatatgccatcttcttcatcattagataatttttcttataaaata  24048100                                                         --------->O2                                                         <---------ANAC58                                                         --------->bZIP60(1)                                                         <---------O2                                                         <---------ANAC58                                                         --------->TGA1a                                                         <---------bZIP60(2)                                                         <---------TGA1a                                                    <---------ICU4                 <------------CBF                 --------->ARR11(3)                --------->ATHB12                  <---------ARR11(3)         ------------>CBF                         --------->GLK1(2)        --------->YAB1                     <---------HSFB2a(2)        <-----------GT1     <---------ANAC58----------->GT1       <---------YAB1       <---------ANAC58--------->LBD16     --------->YAB1    <---------GLK1(1)   <---------ANAC58                                         -     <---------ICU4   <---------ARR14(2)   <---------ANAC46                                         <    <---------ATHB51  --------->ARR14(2)   <---------ANAC58                                     -----    --------->ICU4<---------WOX13(1)       <---------ANAC55(2)                                  <---- ----AHL20(2)  <---------YAB1             <---------LBD16============================================ --->AHL20(2)  <---------AHL20(2)         <-----------------------TaNAC69(2)                  -------   aatgcaattataacaatttgattggatatgtcttgtcatttagttgcggaaaaatcttgacgtctcttcttgtctgaagtcttaagtatataactggaaa  24048200                                                          <---------ZAT18                                                          --------->ZAT14                                                        <---------ANAC55(2)                                                 ------>ZmHOX2a(1)                                               ------>ZmHOX2a(2)        *TSS                                  <------ZmHOX2a(2)   <------------CBF                          <---------ARR11(3) -------->ANAC55(2)                          <---------ARR14(2) ---------ANAC55(2)                          --------->ARR14(2) ---->HSFB2a(1)                              --------->ARR11(3)          <---------ARR14(2) -----HSFB2a(1)                            --------->MYB59<---------ZAT14--------->ARR11(3) ====bZIP_DOF                              ----------->ARR10      --------->AHL20(2)           ------ --->DOF2        ---------->DOF2   <----------DOF2 --------->REM1(1)    <---------CCA1(2)   ------>ZmHOX2a(1)   gtccgtattggagttcaacaaaagaagaaaacgaagacttttagttagatcctacattactgaactcattatatatatctggtgagacattctcctatat  24048300                           --------->YAB1                                                           -                     <---------At4g35610                                                            <                     <------NtERF2                                                              -----                    --------->ANAC58                                                            <----                    --------->ANAC58                                                      <---------ANAC46                --------->ANAC46                            ---------->DOF2           <---------ANAC58                --------->ANAC58                        --------->ANAC46              <---------ANAC58                --------->ANAC58       ----------->GT1  --------->ANAC58             <---------MYB46(3)          <----------DOF2 --------->AHL20(2)   ----------->GT1                     <---------WOX13(1) --->ARR14(2) ---------->DOF2         <------ZmHOX2a(1) --------->ANAC58     <---------TOE2(3)  <----   atgcagtttcaactttcaaagccagcaaataataaacagaggagaaatatggaaacacaaggcaaagtaatcacttgcaaaggtaattggttgtgtatat  24048400                                                                       --------->ALFIN1                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                     <---------ANAC46           <---------AHL20(2)                                 --------->ZAT2 <---------At4g35610       --------->AHL20(2)                                  --------->ZAT2    --------->At4g35610     <----------DOF2                             <---------YAB1 <-----------RAV1(1)    <---------ICU4       --------->ICU4          ------->TEIL <---------At4g35610 -------->AHL20(2)       <---------YAB1       <---------YAB1  --------->At4g35610 ---------AHL20(2)  --------->bZIP60(1)     --------->YAB1 <---------ZAT2    <---------ZAT2 ---->AHL20(2)      <---------bZIP60(1)    --------->ICU4  --------->At4g35610 -----AHL20(2)--------->ICU4         <---------ANAC58      <---------At4g35610            ----------- -----YAB1 --------->AHL20(2)        <---------ANAC58    --------->MYB46(3)  --------->ZAT2   aattaatctttatataaatatgatgtgatgagtgagtgagcgtgaatgatgaatattgaacagctgctgtggcatggggagctggagagcctctagtaat  24048500                     ------>ZmHOX2a(1)                ------>ZmHOX2a(2)                                               <---------At4g35610               =============HOX2a_HOX2a                                         --------->At4g35610               <------ZmHOX2a(2)                                              ---------->CDC5              --------->ARR11(3)                                            ------>ZmHOX2a(2)              <---------ARR14(2)                                          <-----------ARR10              <---------ARR11(3)                  ------>ZmHOX2a(1)      --------->ZAT14              --------->ARR14(2)                  =================================HOX2a_HOX2a        --------->DAG2    --------->ATHB12    --------->ARR14(2)  ----------->HVH21       ---------->DOF2 ---------->DOF2        <---------ARR14(2) <-----------HVH21   ----------->GT1------>ZmHOX2a(1)     <---------ARR14(2)    <---------At4g35610         --------->DAG2 ---->AGL15--------->ALFIN1             --------->ARR14(2)    ----------->RAV1(2)       ---------->DOF2   ggaagatgtaaaagtggatcctcctcaaagattggaagtgagaattcgaatcctcttcacttccatctgtcacactgatctcagcgcatggaaaggcgag  24048600                                         --------->ARR11(3)                                         <---------ARR11(3)                                      --------->YAB1                                      --------->AHL20(2)                                  <---------AHL20(2)                <----------DOF2                          <<<<<<<<<TBF1 <---------CCA1(2)       <---------CCA1(2)                       <<<<<<<<<TBF1  <---------AHL20(2)    <---------CCA1(2)                    <---                    <<<<<<<<<TBF1 --------->AHL20(2) ------>ZmHOX2a(1)                           ----                 <<<<<<<<<TBF1 <----------DOF2       <---------CCA1(2)                 ---------->CDC5   gtactcactcttcatgttcttcttcttcttcttcttttaattatatctcttcttcctatctcatctctatcttttggtcagaacgaggctcagcgagcat  24048700  Previous    Next  AGI:  At1g64710.1    Description:  alcohol dehydrogenase, putative. Identical to Alcohol dehydrogenase-like 4 [Arabidopsis Thaliana] (GB:Q8VZ49;GB:Q9XIS0); similar to alcohol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT1G32780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62899.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-containing, conserved site; (InterPro:IPR002328); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPr Range:  from: 24048208    to: 24050215    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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