Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <------NtERF2                  <---------ICU4                  <---------AtLEC2                                   <---------MYB46(3)                --------->ANAC58              <---------MYB52(1)     --------->ABI4(2)       ---------->DOF2 <----------ID1     <---------At5g28300       <---------AtMYB61      --------->AHL20(2)------>NtERF2    --------->MYB52(1)         --------->ALFIN1         ------->TEIL --->GLK1(2)    --------->ANAC58         <-----------GT1         <---------DEAR3(1)  <---------MYB59 ------------------>ANAC81      ----------->GT1             ---------->DOF2  <-----------RAV1(1)<----   cagacaaataaaagaagtaagcatggcgacgagcgagtataaataaccgttgtgaaatagaagaaagacggtggtctctgtgttgggcctaaatgaatat  23982100                                                                                <---------AHL20(2)                                                                             --------->AHL20(2)                                                                             <---------AHL20(1)                                   --------->YAB1----------->RAV1(1)         --------->AHL20(1)                           <-----------GT1       <---------ALFIN1     <------NtERF2               <--                          <-----------GT1     --------->PCF2        <---------ANAC46        --------- -----ANAC55(2)  <-----------RAV1(1)         <-----------TCP11(1)<-----------RAV1(1)---------->DOF2--   gtaagcccaaatacaagttgtgttgttttttccctcatcgtaatataaggcccacatatgtttttttttgtcgtcgaaatattttataaagcccaaacga  23982200                                                                              ------->TEIL                                                                         --------->ZAT2                                                                         <---------At4g35610                                                                         <---------ZAT2                                                                         --------->At4g35610                                                                         ----------->RAV1(2)                                                                        --------->LBD16                                                                      <---------LBD16                                                                  ----------->HVH21                                                                  <---------ETT(1)                                                                 ------>ZmHOX2a(2)                                                                 --------->DEAR3(2)  <---------ALFIN1                     <----------ID1           <------ZmHOX2a(2)         <---------MYB46(3)  ----------->RAV1(1)        <---------GLK1(1)                 --------->ARR14(2)       <---------ANAC46 ---------TCP11(1)          <---------GLK1(2)                  <---------ARR14(2)     <---------MYB46(3) >MYB52(1)               <---------TOE2(3) ---------->DOF2    <------ZmHOX2a(1)      <---------AtMYB61 ------->PCF2     ---------->DOF2  ---------->DOF2          --------->MYB59----------->HVH21   aggcccacatatgtttaactgaaagttatggattttccaaagagaaaaagaaatacaaaaattaggatccgacccggctgaacccgagtggtttgttctt  23982300                                            --------->GLK1(2)                                            <---------ARR14(2)              <-------MYC3                                            --------->ARR14(2)              ------->MYC3                                     --------->WOX13(1)                    --------->ANAC55(2)   <---                                   ------------>CBF                        --------->ANAC58     <----     --------->LBD16           <----------DOF2   ---------->ID1   <---------REM1(2)    <---------ATHB12    --------->ANAC46      <----------DOF2  <---------GLK1(2) <---------GLK1(2)     ------------>CBF<-   <---------LBD16       <---------DAG2 --------->YAB1   <-----------GT1   --------->ANAC58    ------   gttcccacggagaaaaactttgctctccctttcctttgtcaatcggaatctgtcccatttatcgattcttcacagacacgttttcttcaatctttctcca  23982400                                                           <---------WOX13(1)                                                          <------------CBF                                                         --------->ATHB12    <---------ANAC58                                    <---------YAB1    <---------ANAC58                                  --------->YAB1 ------MYB52(1)                                       ------>ZmHOX2a(2)                          <--- --------CBF                                    <------------CBF   <-------GAMYB    ------------>CBF --------MYB46(3)         --------->ETT(2)   ================HOX2a_HOX2a         <------------CBF---- --->ATHB12      --------->MYB52(2)          <------ZmHOX2a(1)    <-----------RAV1(1)  <------------CBF   ttggtttcgttctcaaggtttgtttgtgtcgatcgaatttagtttcaggacattgatcgtaattggttctgttgcagtttgagaattgcaattgttgtca  23982500                                                                                   <---------ATERF1(1)                                                                                   <---------SPL7                                                                                  --------->DEAR3(1)                                                                                <-----------HVH21                                                                               --------->DEAR3(1)                                                                              --------->DEAR3(2)                                                                              --------->MYB46(3)                                                                             ------->TEIL                                         <------ZmHOX2a(2)        --------->ATERF1(1) ------YAB1   --------->TOE2(3)     <---------LBD16  --------->TOE2(3)    ----------->HVH21 ----->ICU4--------->TCP20     <---------GLK1(1)     --------->TOE1(3)  ----------->RAV1(2)   tgtttagatagtggaaccctaatttgagtcatgaaatctctggatcaagtagaaaccctaatttcagggcctccctctgaaccgtcgtcccctaatagag  23982600                                                                                            <--------                                           <---------bZIP60(2)                      <-----------GT1                                           <---------ANAC46                      <---------ARR14(2)                                        ----------->TGA1                         <---------GLK1(2)                                      --------->YAB1                             --------->ARR14(2)                  >>>>>>>>>TBF1<---------ANAC58                                 <------ZmHOX2a(1)               >>>>>>>>>TBF1   <---------ANAC58       <---------ARR11(3)      <---------TOE2(3)   <--       --------->ICU4        --------->ALFIN1  <------ZmHOX2a(1)       <----------DOF2  ------>ZmHOX2a(1)     ---------->DOF2 >>>>>>>>>TBF1   <---------YAB1   --------->ARR11(3)      <---------TOE1(3)   ---   acctagataaagatgaagaagaagaagaagagtgcgagtatgatgacgaggaagaagatgttgatttcaatccctttcttaaggattctccttctcgtga  23982700                                                                           --------->TOE1(3)                                                                           --------->TOE2(3)                                                                           --------->TOE1(2)        <              --------->At4g35610                                       <---------ALFIN1     ======== -ANAC46      <---------At4g35610            ----------->GT1         --------->LBD16         -------- -------HSFC1(2)                     ----------->GT1             --------->ARR14(2)       --------->ANAC58 ------>HSFC1(2)             --------->GLK1(2)                   <---------ARR14(2)       --------->ANAC58   agcttcttccagtttgagctctgaagttgagactcttgatggtgaaattgttaatagcattactacggttccccaaaccttagagggcagacaaggaaag  23982800                                                                        <------NtERF2                                                                        --------->LBD16                                                                       --------->ANAC58                                                                       --------->ANAC58                                                                       --------->RAP2.3(2)                                                                       --------->RAP2.6(2)                                                                      --------->ATERF1(1)                                                                      --------->RAP2.3(1)                                                                      <------NtERF2                            <---------ANAC58 ------>MYB83            <---------ATERF1(1)                            --------->TGA1a--------->AtMYB61         ------>NtERF2                            ===========================================MYC_MYB                            ============================================MYC_MYB               --------->ANAC58            <---------ALFIN1         <---------PCF5 <---------ARR14(2)         <---------TGA1a--------->MYB46(3)    --------->ALFIN1 --------->ARR11(3)         <---------ANAC58 ------>MYB46(1)   <---------ZAT2 --------->ARR14(2)  --------->YAB1    --------->MYB46(3)      >>>>>>>>>TAC1 <---------ARR11(3)  <---------ICU4  --------->ARR14(2)        <-------GAMYB ------ZmHOX2a(1)   --------->ICU4 --------->ANAC58        <------ZmHOX2a(1) =====================================bZIP_DOF             ------------>AtMYB77  --------->MYB52(1) -->DOF2       --------->ANAC58    --------->ANAC58  <---------YAB1 <---------RAP2.3(3)    --------->ATHB12   gaggatattgcaatgccaagtaatgatgtctcgtgccaagaaccaccaatccctgatgagaggacagttggggccgcaaatgaaaacggagaacaattgg  23982900                                                                                 <---------ANAC58                                   <------ZmHOX2a(1)                             <---------ANAC58                         <-----------HVH21                                   <---------ANAC58                   --------->CCA1(2)                                --------->ANAC58                  --------->ARR14(2)                                --------->ANAC58            --------->ANAC58     <---------TOE2(3)                 --------->ZAT18            --------->ANAC58 <---------At4g35610                 --------->ZAT2  <---------ANAC46  --          --------->At4g35610--------->At4g35610      --------->MYB52(1)     <---------ANAC58      <- ------>ZmHOX2a(2)<---------ARR11(3)  <---------At4g35610        <---------At4g35610    <-----------GT1   tgatccaaactcagaagcaagatttgatgtcaactgaggaagatgatgcaatctgcaaacggactagagctcgctattcgcttgcgagtttcacccttga  23983000  Previous    Next  AGI:  At1g64570.1    Description:  DNA binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO17939.1); contains InterPro domain Homeodomain-like (InterPro:IPR009057) Range:  from: 23982531    to: 23987588    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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