Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------ANAC58                                                                          <---------ANAC58                                                                          <---------ANAC46                                                                        <---------ARR11(3)                                  <---------At4g35610                   --------->ARR11(3)                                  --------->At4g35610              <---------ZAT14                     <------ZmHOX2a(1)                             --------->ZAT14                 --   tgctagagattacagggtatggaggaagttttatagagctgaaacaaatgaggcattttttgggaaaactgcaatgtcttgaaactgtgagaattggtgt  23972000                           --------->ANAC58                      --------->TOE2(2)                     --------->At4g35610                     ----------->RAV1(2)                    ------------>OsbHLH66            --------->MYB46(3)          ----------->RAV1(1)   <-----------ARR10          =======================RAV        <------NtERF2--------->ZAT2       ----------->GT1--------->TOE1(2)      <---------DEAR3(1)   --------->ANAC58      --------->ANAC58------->PIF5      --------->ANAC58<-------PIF5    <---------At4g35610     --------->SPL7<---------ALFIN1   --------->At4g35610        --------->ZAT18               <-----     --------->RAP2.6(3) <---------ANAC58                 <---------At4g35610              <--------- <---------------AtSPL3  <---------ANAC58               --------->REM1(1)           --------->ARR11(3) -------->DOF2  ------->GAMYB  --------->WOX13(1)      <-------TEIL----------->RAV1(1)------>ZmHOX2a(2)   tgaaagggacggcaacaacgagcacctgcgagccaatctaagctctcttcatagagcttcatcagagtgcaacatccagttcatttgatctctctttaaa  23972100                                                                 <---------ZAT14                                                                 --------->ZAT18                                                          --------->DAG2                                                         ---------->DOF2                              --------->AHL20(2)      <------MYB83                             --------->AHL20(2)       <------MYB46(1)                         <------                             --------->YAB1           ----------->GT1                         -------                          --------->YAB1             --------->MYB59    <---------WOX13(1)   <------- ------GT1         <---------MYB46(3)           --------->AHL20(2)    --------->ATHB12       <------- -DOF2          ------------>MYB.PH3(2)         <---------AHL20(2)   --------->ICU4          <-------   caagttatagataatatgagtttgttagtaataaaaatatgacattttgtttaatttggtaaagttttgcactgattggcgaaacaattaagaggtctag  23972200 ----------->GT1 ---------AGL15 -------->AGL15             --------->At4g35610 ----------AGL2           --------->YAB1------->MYC3                 <---------YAB1 ----------AGL1        --------->WOX13(1)                         <----------DOF2 ----------AG       --------->GLK1(2)   <-------MYC3           <------ZmHOX2a(1)   ttttggtaaaatccaaattgctaatctatcatctctcaaacatgtgttaacaaaaacaaaattgaggacttttgatttcacaatggccttgagccatgtt  23972300                          --------->YAB1 <------MYB46(1)                        ----------->RAV1(2)                         <---------ATHB12<------MYB83                          ------>NtERF2                      <---------AHL20(2)--------->MYB59             <---------ZAT14                     --------->AHL20(2) <---------AtMYB61           <---------ARR14(2)                 --------->LBD16    <------MYB83           <---------------AtSPL8                   -               <---------LBD16      <------MYB46(1)        <---------------AtSPL3           ---------           --------->DOF5.7(2)<---------AHL20(1)           --------------->AtSPL3           <--------          --------->TOE2(3)  --------->YAB1      <---------AHL20(2) --------->ZAT14         ---------          --------->TOE1(3) <---------YAB1    ----------->GT1       --------->ARR14(2)      <--------   aagagggaacaacgttaaccggattaaatcataatatttggtttggtttagtaaattagaaaacgtactgtatactctctctgcctgagggagaaggttc  23972400                                                     ---------->DOF2                                                    <------ZmHOX2a(1)                                               <---------AtMYB61      --------------------->WRI1             --------->ALFIN1 --------->DOF2                              <---------ANAC46 >HSFB2a(1)                               *TSS --------->ALFIN1                                 <---- -HSFC1(2)   <---------HSFC1(2)          <---------ANAC46                                   --------- >HSFC1(2)---------->DOF2                <---------ANAC58                 <---------LBD16  <--------- -HSFB2a(1)  --------->HSFC1(2)          <---------ANAC58        <---------ATHB12     ------->TEIL   caaatagccctaaaaagcttcgccttctctccttgccttcatttcgggtgtggaggaaagttatcaaatcagtttttgtggaattttgaatctcgtcgct  23972500                                                         <---------At4g35610                           <---------ZAT14               --------->At4g35610                         --------->ZAT2                  --------->ZAT2                         --------->At4g35610             <---------ZAT2                         <---------At4g35610         <----------CDC5                       <---------ZAT18             --------->ANAC58                           <------                      <---------ANAC58             --------->ANAC58                          -------- <-----------RAV1(1)  <---------ANAC46          <---------SPL7 <------ZmHOX2a(1)            <-------- ------DOF2           <---------ANAC58          ----------->HVH21          <-----------------AGL2 ->ID1         <---------ZAT14    <---------ANAC46--------->SPL7   --------->ALFIN1      --------->REM1(1) --HVH21  <---------YAB1 <---------ZAT2     --------->ZAT18 <-----------RAV1(2)<---------ATHB51   tctgtgttggctatgactgaagttgcgagctcagtggtgtatgaagtgctcggacgcagagctcaggatgtggacgagccgattatggactacatcatta  23972600                                                                      --------->ANAC46                                                                    <---------ALFIN1                                                                <---------ZAT2                                                                --------->At4g35610                                                           <---------DEAR3(2)                                                           <---------MYB46(3)                                                          <---------DEAR3(1)                                                         <------NtERF2--------->O2                                                        ------>NtERF2------>ZmHOX2a(1)                                                        <---------RAP2.6(3)               -----------                                                        <-----------HVH21               <---------ARR14(2)                                             <------NtERF2<---------At1g77200--------->ZAT2                                          --------->ATERF1(1)   <---------At4g35610  <---------ANAC58                                          --------->RAP2.3(1)  ----------->ARR10     <---------ANAC58                                         <---------ATERF1(1)<-----------HVH21<---------ZAT2                --------->GLK1(1)    --------->ALFIN1  <---------ANAC46   <---------At4g35610   ------>ZmHOX2a(1)     <---------DEAR3(1) ------>NtERF2<---------MYB52(1)  <---------At4g35610 ---YAB1       --------->ARR14(2)  <------MYB83<----------DOF2<---------ZAT18--------->At4g35610 ->TOE2(3)     <---------ARR14(2)  <------MYB46(1)     <---------ANAC58  <---------DEAR3(1) -ICU4        <------ZmHOX2a(1) <------ZmHOX2a(1)      <---------ANAC58<-----------HVH21--------->ARR14(2)   atgtcctcgctgatgaggatttcgacttcggtgaggaaggtgaaggcgcctttgatgccgtcggtgagctcctcgtcgctgctgaatgcgtttccgattt  23972700                   <-----------GT1                 <---------MYB52(2)                --------->ANAC58                --------->ANAC58                <---------ANAC55(2)                --------->ANAC55(2)              <--------P            ----------->GT1            <------MYB46(1)           <---------MYB46(3)           --------->MYB46(2)           --------->MYB59          <---------MYB55(1)          <---------ANAC58                                   <---------ANAC58         <---------MYB52(1)           <---------AtLEC2                                   <---------ANAC46        <---------RAP2.6(3)           <---------ANAC46                    --------->ARR14(1)       <---------ANAC46               <---------ANAC58                   <---------ARR14(2)       <---------ANAC58       <---------At4g35610                        <---------GLK1(2)       <---------ANAC58       --------->ZAT2                  --------->YAB1         <----------DOF2      <-----------------------TaNAC69(2)   <---------ANAC58  <---------TOE2(3)     <---------YAB1     <---------ZAT18          <---------ZAT2<----------DOF2  <---------YAB1       <-----------GT1   -     --------->ZAT18 --------->MYB46(3)    <---------ANAC58--------->ATHB51<-------TEIL  <---------ANAC58 ------>AGL1<------MYB83     <---------TOE1(2)             --------->YAB1--------->ARR14(2)  <-------   cgaagagtgccgtttggtaagtaaccattcgcagcttgttgcttggctttcttcatttcaattatcgtaattctagattcgttttatctttgcttgtttg  23972800                                                                                 <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                                --------->AHL20(2)                                                                             <---------CCA1(1)    ---                                                                      --------->At4g35610       <----                                                                      <---------ZAT2            -----                                                                      --------->ZAT2        <--------                                                               <---------YAB1<---------RVE1(1)<------                                 <-------GAMYB       --------->ARR11(3)     --------->ARR11(3)<------                                <---------MYB46(3)   <---------ARR11(3)   ----------->ARR10<---------AtMYB61 -------->ICU4              ----------->HVH21      --------->MYB59    <---------At4g35610  --------->ALFIN1 --ANAC46       <---------MYB52(1)       ----------->GT1    <----------DOF2 <---------ARR11(3)<------   tatttatgggattttttcgttagggcctctgtgactgttgaaatggtttcaataaggtctcgcttttgaatgagctgagatatttaattggatgtggtgt  23972900  Previous    Next  AGI:  At1g64540.1    Description:  F-box family protein. Identical to Putative F-box protein At1g64540 [Arabidopsis Thaliana] (GB:P0C2F8;GB:Q9SGW1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G35995.2); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G35995.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63564.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 23970572    to: 23972088    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g64550.1    Description:  ATGCN3 (Arabidopsis thaliana general control non-repressible 3). Identical to GCN20-type ATP-binding cassette protein GCN3 (GCN3) [Arabidopsis Thaliana] (GB:Q8H0V6;GB:Q9SGW1); similar to ATGCN4 (Arabidopsis thaliana general control non-repressible 4) [Arabidopsis thaliana] (TAIR:AT3G54540.1); similar to hypothetical protein OsI_009328 [Oryza sativa (indica cultivar-group)] (GB:EAY88095.1); similar to ATP-binding cassette transporter, subfamily F, member 1 protein PpABCF1 [Physcomitrella patens subsp. patens] (GB:EDQ73984.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69480.1); contains InterPro domain ABC transporter related; Range:  from: 23972442    to: 23977277    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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