Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------ARR11(3)              --------->ARR11(3)                                      ----------->GT1              --------->GLK1(2)                                   --------->TOE1(3)        <---------HSFB2a(2)                                <-----------ARR10        --------->HSFB2a(2)                                <---------ARR11(3)                      <-     <---------AHL20(2)                                    --------->ARR11(3)     xxxxxxxxxxxxxxxxxxx  <---------ARR11(3)            <---------TOE2(3)          --------->GLK1(2)  ----------->GT1     <--  --------->ARR14(2)            <---------TOE1(3)         --------->RVE1(1)   <----------ID1    -----  <---------ARR14(2)   ---------->DOF2      --------->TOE2(3)     --------->TOE2(3)      ---------->DOF2 <------ZmHOX2a(1)  --------->YAB1       <-----------GT1--------->AHL20(2)  ---------->DOF2    ------   ggaggattttatagaaaatctaaaataaagttttaagggtattttacattagactaaaaaaaatctaaccttaggtaaaaaagaaaaacataaaagaaag  23970200                                      <------MYB83                                      <------MYB46(1)                                      --------->At4g35610                                      ----------->GT1                                     <---------MYB46(3)                                    --------->AHL20(2)                                    <---------ANAC46                                       <---------AHL20(2)                                    <---------ANAC58          <---------TOE2(3)        <---------AHL20(2)                      --------->AHL20(2)                     --------->YAB1            --------->AHL20(2)   --------->AHL20(2) <---------AHL20(1)                     --------->MYB52(1)       --------->AHL20(2) ------TEIL           --------->AHL20(1)      --------->WOX13(1)                 ----------->GT1 xxx>smallRNA(se3)    <---------AHL20(2)     --------->AHL20(2)                 --------------------- ------P             --------->AHL20(2)      <---------AHL20(2)<---------YAB1   --------->DAG2     -- ------>GT1  --------->DAG2         <---------ANAC58        <---------ATHB12  ---------->DOF2      -- --->DAG2   ---------->DOF2    --------->MYB52(1)   <---------MYB52(2)       <------ZmHOX2a(1)     --   gttgattaaaaaaaaaaagttgaataaattagctaatggctggtgaattaatcaactatccaataacgattcactgagaggaaaggtataaaattaaaaa  23970300                                                                              --------->ZAT2                 <---------ARR11(3)                                           <---------ZAT2                 <-----------ARR10                                            ----------->RAV1(2)         --------->ZAT18                                                 --------->ANAC58         --------->ZAT14                                                 ------>MYB46(1)         <---------ZAT14                                                 --------->ANAC58         <---------ZAT18                                                 ------>MYB83  --------->CCA1(2)                                                      --------->ANAC46 <----------DOF2 --->ANAC81      --------->ARR11(3)                             <-----------HVH21    <---------At4g35610 ------->ANAC58  --------->ARR14(2)              <---------ALFIN1   --------->REM1(1)----------->RAV1(2) ------->ANAC58  <---------ARR14(2)     ----------->GT1        ------>ZmHOX2a(1)------>ZmHOX2a(1) ------->ANAC46 <---------CCA1(2)   ---------->DOF2 --------->AtMYB61 --------->ANAC46 ------>ZmHOX2a(1)   caagacatgggtgaactcaaatcttctgtctagtcgaaaaaagagataattccacctccatcttcctgttacaccaagcctcctggctcctgcttcattt  23970400                                                   --------------->AtSPL8                                               ------>MYB46(1)                                             --------->TOE2(3)                                           ------>MYB83                                           -------->P                                         <---------MYB59                         --------->AHL20(2)                                         --------->AtMYB61                       <---------AHL20(2)                 <---------ANAC46     >>>>>>>>>>WRKY43                 <---------AHL20(2)               <---------ANAC46       >>>>>>>>>>WRKY38             <---------AHL20(2)             <-------GAMYB            >>>>>>>>>>WRKY26             --------->AHL20(2)             <---------ZAT14          <-----------GT1             --------->AHL20(2)          <---------ANAC58       <---------YAB1------>MYB83       <---------AHL20(2)   <---------TOE2(3)          <---------ANAC46     --------->YAB1<---------MYB59     <---------WOX13(1)    <---------TOE1(3)          <---------ANAC58------>ZmHOX2a(1)------>MYB46(1)  <----------DOF2  <---------TOE2(3)<------   ctcccaaggtttgtgtgttgtgtctgtcctgaatcatatttgaccaacctaattttgttcccctttgatttatttagtttagattaattagggtttatga  23970500                                                         <---------ANAC58                                                         <---------ANAC58                                                    --------->GLK1(2)                                                    --------->ARR14(2)                                                <---------HSFB2a(2)                                                --------->HSFB2a(2)                                               ------>ZmHOX2a(2)                                  >>>>>>>>>RAP2.2--------->LBD16                            ---------                                <---------ARR11(3)  <---------ARR14(2)                    --------->At4g35610                        <------ZmHOX2a(1)      ====================================HOX2a_HOX2a --------->ZAT6         ==============================HOX2a_HOX2a           ------>ZmHOX2a(1) ---YAB1  ----------->TBP       --------->ARR11(3) <---------GLK1(2)    ------->TEIL<-------TEIL   <-   gtaactctggctatatatgttagagaggacttgatatctaaaactgtgatccagaatttgcatgcgattcgatgaatcctagagagttcatcagcaatct  23970600                   --------->ARR14(2)                   <---------ARR14(2)                                                          <-----        --------->GLK1(2)                                                                      ------       <---------GLK1(2)                                                                  ------>ZmHOX2a(2)     ----------->ARR10             <---------ETT(1)                                 <---------At4g35610 --------->At4g35610       <----------DOF2                                         --------->GLK1(2) <---------At4g35610   ------>ZmHOX2a(1)                                         ================HOX2a_HOX2a >WOX13(1)         --------->ARR11(3)                                            <------ZmHOX2a(1) ----------RAV1(2) <---------ARR11(3)              <-----------GT1          --------->ALFIN1------>ZmHOX2a(1)   gccagatgagattcttggcaaaatcctgtctttacttccgacaaaacttggtgtttccacatctgttctgtccaagaggtggaggaatctgatccttctc  23970700                                               <---------ANAC46                                               <---------ANAC58                                               <---------ANAC58 <---------ANAC58                                            <----------DOF2     <---------ANAC58                                    <----------DOF2        <-----------RAV1(1)       <---------ATHB12 ----HSFB2a(2)                     <---------ANAC58     --------->MYB52(1)      ---------->ID1 --->HSFB2a(2)                     <---------ANAC58  <---------At4g35610       <-----------HVH21   gtagacaacttcgatttggaagactcatcaactagtggcttctctgctttcttggagcaaactgttgctcgcttaaacacttgtcccatcaagagactct  23970800                   <---------GLK1(2)             <---------MYB52(2)          <------NtERF2                                            <---------ANAC46         ------>NtERF2                                             <---------ANAC58         <---------ATERF1(1)                                      --------->ZAT2         <------NtERF2                                            <---------ZAT2         <---------RAP2.6(3)                                   --------->At4g35610           <-------        --------->ATERF1(2)         <-------GAMYB              --------->ATERF1(1)           --------        --------->RAP2.6(2)         >>>>>>>>>TAC1              <---------ZAT2                --------        --------->ANAC58        ------------>AtMYB77           <------NtERF2--------->ZAT14  <-------        --------->ANAC46       ----------->HVH21               <---------At4g35610           --------        <---------ATERF1(2)  --------->ZAT2                   <---------ATERF1(1)            <-------        --------->DEAR3(1)   <---------At4g35610             <---------RAP2.6(2)             --------        --------->ANAC58     --------->At4g35610    <----------DOF2<---------ANAC58          <-------       <---------RAP2.6(2)<---------At4g35610 --------->ZAT6<---------LBD16 <---------ZAT14 <--------   ctctcaatggccgccactatcgattctcttctgctgacagttggattagcactgctttcgaacgcggctgcttggaactacacttgcaatcccaatatct  23970900       --------->GLK1(2)      <---------GLK1(2)     <------ZmHOX2a(1)                                                           --------->bZIP60(1) --AHL20(1)                                                                      <---------bZIP60(1) ->AHL20(1)                                                                     --------->RAP2.6(3) ->ARR11(3)                                                                    <---------ICU4 --ARR11(3)                                                                    --------->ATHB12 ->ARR14(2)                                                                   <---------ATHB12 --ARR14(2)                               --------->ARR14(2)                  --------->ICU4 ->ARR14(3)                <---------MYB46(3)   <------ZmHOX2a(2)  <---------ANAC58 --ARR14(3)                ----------->GT1<---------ARR14(2)       <---------ANAC58--------->ZAT18 -CCA1(2)       ----------->GT1       --------->ZAT6  <---------AHL20(2)  <-----------------AGL1   tgatacaggaatcttgtctagtaacacattggttaaactcacactatccgatcaaatttatcttcaagggcttgttccccatgatggcactgtgtttttc  23971000                                   ----------->HVH21                                 <---------At4g35610                               <---------RAP2.6(2)                             <-----------RAV1(1)                             --------->ALFIN1                                                     ---                           <-------GAMYB                                                        <----                        --------->ABI4(2)                                                       <----                        <---------ZAT18                                                         -----                        --------->ZAT14                                                         -----             <----------DOF2 <---------MYB46(3)------->TEIL         <--------P                  <----  <---------ZAT18       <---------ZAT14------>ZmHOX2a(2)     <---------CCA1(2)                  <----   ccagcgctcaagactctttctctcggtgcagttgtggctgatcgagatgtatatgagtcgctcatctctggttgccctgtgctcgatgagttatccatac  23971100  Previous    Next  AGI:  At1g64540.1    Description:  F-box family protein. Identical to Putative F-box protein At1g64540 [Arabidopsis Thaliana] (GB:P0C2F8;GB:Q9SGW1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G35995.2); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G35995.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63564.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 23970572    to: 23972088    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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